RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 LPAP08519 4548 aa14.38□□□□□ -0.11
HERPUD2-205ENST00000427455 SNCGO76070 127 aa14.36□□□□□ -0.11
HERPUD2-205ENST00000427455 TRIAP1O43715 76 aa14.34□□□□□ -0.11
HERPUD2-205ENST00000427455 FAM218AQ96MZ4 157 aa14.33□□□□□ -0.12
HERPUD2-205ENST00000427455 PPDPFLQ8WWR9 84 aa14.32□□□□□ -0.12
HERPUD2-205ENST00000427455 F8WEM9 126 aa14.31□□□□□ -0.12
HERPUD2-205ENST00000427455 A0A1B0GX51 115 aa14.29□□□□□ -0.12
HERPUD2-205ENST00000427455 PSMB2P49721 201 aa14.28□□□□□ -0.12
HERPUD2-205ENST00000427455 OCIAD2Q56VL3 154 aa14.28□□□□□ -0.12
HERPUD2-205ENST00000427455 TSTD3H0UI37 97 aa14.27□□□□□ -0.13
HERPUD2-205ENST00000427455 CD164Q04900 197 aa14.27□□□□□ -0.13
HERPUD2-205ENST00000427455 FP248Q71RG6 208 aaPredicted RBP14.27□□□□□ -0.13
HERPUD2-205ENST00000427455 IGLV7-46A0A075B6I9 117 aa14.26□□□□□ -0.13
HERPUD2-205ENST00000427455 M0R143 59 aa14.26□□□□□ -0.13
HERPUD2-205ENST00000427455 HRCT1Q6UXD1 115 aa14.26□□□□□ -0.13
HERPUD2-205ENST00000427455 LIMD2Q9BT23 127 aa14.25□□□□□ -0.13
HERPUD2-205ENST00000427455 COX6CP09669 75 aa14.24□□□□□ -0.13
HERPUD2-205ENST00000427455 CLEC2BQ92478 149 aa14.22□□□□□ -0.13
HERPUD2-205ENST00000427455 SNHG12Q9BXW3 62 aa14.22□□□□□ -0.13
HERPUD2-205ENST00000427455 IGLV8-61A0A075B6I0 122 aa14.21□□□□□ -0.13
HERPUD2-205ENST00000427455 GHRHP01286 108 aa14.2□□□□□ -0.14
HERPUD2-205ENST00000427455 TPRXLQ17RH7 258 aa14.2□□□□□ -0.14
HERPUD2-205ENST00000427455 A0A0G2JQZ4 141 aa14.19□□□□□ -0.14
HERPUD2-205ENST00000427455 Q6JHZ5 121 aa14.19□□□□□ -0.14
HERPUD2-205ENST00000427455 DNAL4O96015 105 aa14.16□□□□□ -0.14
HERPUD2-205ENST00000427455 Q5XG85 94 aa14.13□□□□□ -0.15
HERPUD2-205ENST00000427455 IGFL1Q6UW32 110 aa14.13□□□□□ -0.15
HERPUD2-205ENST00000427455 SCGB1C2P0DMR2 95 aa14.11□□□□□ -0.15
HERPUD2-205ENST00000427455 NDUFV3P56181 108 aaKnown RBP14.11□□□□□ -0.15
HERPUD2-205ENST00000427455 H3BUT2 72 aa14.1□□□□□ -0.15
HERPUD2-205ENST00000427455 FABP2P12104 132 aa14.1□□□□□ -0.15
HERPUD2-205ENST00000427455 ORMDL1Q9P0S3 153 aa14.1□□□□□ -0.15
HERPUD2-205ENST00000427455 CDIP1Q9H305 208 aa14.09□□□□□ -0.15
HERPUD2-205ENST00000427455 H3BQ85 93 aa14.08□□□□□ -0.16
HERPUD2-205ENST00000427455 LST1O00453 97 aa14.07□□□□□ -0.16
HERPUD2-205ENST00000427455 TRACP01848 142 aa14.07□□□□□ -0.16
HERPUD2-205ENST00000427455 KRTAP13-3Q3SY46 172 aa14.06□□□□□ -0.16
HERPUD2-205ENST00000427455 RNF213Q63HN8 5207 aa14.04□□□□□ -0.16
HERPUD2-205ENST00000427455 TRBV7-7A0A0K0K1E9 115 aa14.03□□□□□ -0.16
HERPUD2-205ENST00000427455 H3BMG7 143 aa14.03□□□□□ -0.16
HERPUD2-205ENST00000427455 TCL1BO95988 128 aa14.03□□□□□ -0.16
HERPUD2-205ENST00000427455 BATFQ16520 125 aa14.03□□□□□ -0.16
HERPUD2-205ENST00000427455 TMEM256-PLSCR3K7ERE1 68 aa14.02□□□□□ -0.17
HERPUD2-205ENST00000427455 NAA38Q9BRA0 125 aaKnown RBP14□□□□□ -0.17
HERPUD2-205ENST00000427455 C1orf195Q5TG92 126 aa13.98□□□□□ -0.17
HERPUD2-205ENST00000427455 Q6Q795 121 aa13.97□□□□□ -0.17
HERPUD2-205ENST00000427455 UBE2V1Q13404 147 aa13.94□□□□□ -0.18
HERPUD2-205ENST00000427455 ASB16-AS1Q495Z4 193 aa13.94□□□□□ -0.18
HERPUD2-205ENST00000427455 TEN1Q86WV5 123 aa13.94□□□□□ -0.18
HERPUD2-205ENST00000427455 ATXN8Q156A1 80 aa13.93□□□□□ -0.18
HERPUD2-205ENST00000427455 LYRM7Q5U5X0 104 aa13.93□□□□□ -0.18
HERPUD2-205ENST00000427455 MUC17Q685J3 4493 aa13.92□□□□□ -0.18
HERPUD2-205ENST00000427455 A0A1B0GV72 72 aa13.89□□□□□ -0.19
HERPUD2-205ENST00000427455 SS18L2Q9UHA2 77 aa13.89□□□□□ -0.19
HERPUD2-205ENST00000427455 ANKRD29Q8N6D5 301 aa13.87□□□□□ -0.19
HERPUD2-205ENST00000427455 BAALC-AS2P0C853 105 aa13.86□□□□□ -0.19
HERPUD2-205ENST00000427455 TRBV20-1A0A075B6N2 111 aa13.84□□□□□ -0.19
HERPUD2-205ENST00000427455 A0A1W2PNM2 257 aa13.84□□□□□ -0.19
HERPUD2-205ENST00000427455 A0A087WSZ3 146 aa13.83□□□□□ -0.2
HERPUD2-205ENST00000427455 C9orf118A6NHY6 69 aa13.83□□□□□ -0.2
HERPUD2-205ENST00000427455 TAX1BP3O14907 124 aa13.83□□□□□ -0.2
HERPUD2-205ENST00000427455 XP32Q5T750 250 aa13.82□□□□□ -0.2
HERPUD2-205ENST00000427455 C9orf92A6NGG3 77 aa13.81□□□□□ -0.2
HERPUD2-205ENST00000427455 TRBV7-4A0A0J9YYF1 115 aa13.8□□□□□ -0.2
HERPUD2-205ENST00000427455 MUC2Q02817 5179 aa13.79□□□□□ -0.2
HERPUD2-205ENST00000427455 RBM3P98179 157 aaKnown RBP13.79□□□□□ -0.2
HERPUD2-205ENST00000427455 A0A1W2PPM0 123 aa13.77□□□□□ -0.21
HERPUD2-205ENST00000427455 CCKP06307 115 aa13.77□□□□□ -0.21
HERPUD2-205ENST00000427455 DSCR8Q96T75 97 aa13.76□□□□□ -0.21
HERPUD2-205ENST00000427455 SEC61BP60468 96 aaKnown RBP13.73□□□□□ -0.21
HERPUD2-205ENST00000427455 C9JAW5 83 aa13.72□□□□□ -0.21
HERPUD2-205ENST00000427455 JMJD7-PLA2G4BH0Y9G9 81 aa13.7□□□□□ -0.22
HERPUD2-205ENST00000427455 COL5A1-AS1Q5SY13 56 aa13.68□□□□□ -0.22
HERPUD2-205ENST00000427455 Q96NJ1 140 aa13.68□□□□□ -0.22
HERPUD2-205ENST00000427455 VPS25Q9BRG1 176 aa13.67□□□□□ -0.22
HERPUD2-205ENST00000427455 H3BT86 120 aa13.62□□□□□ -0.23
HERPUD2-205ENST00000427455 SPCS1Q9Y6A9 102 aa13.61□□□□□ -0.23
HERPUD2-205ENST00000427455 LOC110117498A0A087WWA1 95 aa13.6□□□□□ -0.23
HERPUD2-205ENST00000427455 PCP4L1A6NKN8 68 aa13.6□□□□□ -0.23
HERPUD2-205ENST00000427455 C21orf62-AS1Q17RA5 79 aa13.6□□□□□ -0.23
HERPUD2-205ENST00000427455 Q6ZQT0 140 aa13.59□□□□□ -0.23
HERPUD2-205ENST00000427455 SIGMAR1Q99720 223 aa13.59□□□□□ -0.23
HERPUD2-205ENST00000427455 PDE6GP18545 87 aa13.58□□□□□ -0.24
HERPUD2-205ENST00000427455 OBSCN-AS1Q96MR7 158 aa13.58□□□□□ -0.24
HERPUD2-205ENST00000427455 A0A0U1RQV1 116 aa13.57□□□□□ -0.24
HERPUD2-205ENST00000427455 MTURNQ8N3F0 131 aa13.57□□□□□ -0.24
HERPUD2-205ENST00000427455 C14orf132Q9NPU4 83 aa13.57□□□□□ -0.24
HERPUD2-205ENST00000427455 RPL37P61927 97 aaKnown RBP13.56□□□□□ -0.24
HERPUD2-205ENST00000427455 LINC00472Q9H8W2 130 aa13.56□□□□□ -0.24
HERPUD2-205ENST00000427455 IGKV4-1P06312 121 aa13.54□□□□□ -0.24
HERPUD2-205ENST00000427455 PCOTHQ58A44 107 aa13.53□□□□□ -0.24
HERPUD2-205ENST00000427455 A0A1B0GW54 56 aa13.52□□□□□ -0.25
HERPUD2-205ENST00000427455 KRTAP4-1Q9BYQ7 146 aa13.5□□□□□ -0.25
HERPUD2-205ENST00000427455 DEFB116Q30KQ4 102 aa13.49□□□□□ -0.25
HERPUD2-205ENST00000427455 K7EP34 96 aa13.46□□□□□ -0.25
HERPUD2-205ENST00000427455 Q75L30 129 aa13.45□□□□□ -0.26
HERPUD2-205ENST00000427455 FAT4Q6V0I7 4981 aa13.43□□□□□ -0.26
HERPUD2-205ENST00000427455 DSCR10P59022 87 aa13.43□□□□□ -0.26
HERPUD2-205ENST00000427455 J3KT08 172 aa13.41□□□□□ -0.26
HERPUD2-205ENST00000427455 SMCPP49901 116 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms