RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
FOXN4-203ENST00000423960 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
FOXN4-203ENST00000423960 LINC00304Q8N9R0 145 aa9.91□□□□□ -0.82
FOXN4-203ENST00000423960 Q8NBF4 154 aa9.9□□□□□ -0.82
FOXN4-203ENST00000423960 OCIAD2Q56VL3 154 aa9.89□□□□□ -0.83
FOXN4-203ENST00000423960 PPDPFLQ8WWR9 84 aa9.88□□□□□ -0.83
FOXN4-203ENST00000423960 C4orf48Q5BLP8 95 aa9.87□□□□□ -0.83
FOXN4-203ENST00000423960 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
FOXN4-203ENST00000423960 NAA38Q9BRA0 125 aaKnown RBP9.87□□□□□ -0.83
FOXN4-203ENST00000423960 GHRHP01286 108 aa9.86□□□□□ -0.83
FOXN4-203ENST00000423960 DNAL4O96015 105 aa9.85□□□□□ -0.83
FOXN4-203ENST00000423960 SNHG12Q9BXW3 62 aa9.85□□□□□ -0.83
FOXN4-203ENST00000423960 PCP4L1A6NKN8 68 aa9.84□□□□□ -0.83
FOXN4-203ENST00000423960 F8WEM9 126 aa9.83□□□□□ -0.84
FOXN4-203ENST00000423960 LST1O00453 97 aa9.83□□□□□ -0.84
FOXN4-203ENST00000423960 TRACP01848 142 aa9.82□□□□□ -0.84
FOXN4-203ENST00000423960 H3BUT2 72 aa9.81□□□□□ -0.84
FOXN4-203ENST00000423960 TAX1BP3O14907 124 aa9.81□□□□□ -0.84
FOXN4-203ENST00000423960 SPINK1P00995 79 aa9.81□□□□□ -0.84
FOXN4-203ENST00000423960 ORMDL1Q9P0S3 153 aa9.81□□□□□ -0.84
FOXN4-203ENST00000423960 LRP2P98164 4655 aa9.81□□□□□ -0.84
FOXN4-203ENST00000423960 C9orf118A6NHY6 69 aa9.8□□□□□ -0.84
FOXN4-203ENST00000423960 H3BQ85 93 aa9.8□□□□□ -0.84
FOXN4-203ENST00000423960 FABP2P12104 132 aa9.8□□□□□ -0.84
FOXN4-203ENST00000423960 ATXN8Q156A1 80 aa9.79□□□□□ -0.84
FOXN4-203ENST00000423960 LYRM7Q5U5X0 104 aa9.79□□□□□ -0.84
FOXN4-203ENST00000423960 TCL1BO95988 128 aa9.78□□□□□ -0.84
FOXN4-203ENST00000423960 IGLV8-61A0A075B6I0 122 aa9.77□□□□□ -0.85
FOXN4-203ENST00000423960 TMEM256-PLSCR3K7ERE1 68 aa9.77□□□□□ -0.85
FOXN4-203ENST00000423960 NDUFV3P56181 108 aaKnown RBP9.77□□□□□ -0.85
FOXN4-203ENST00000423960 COL5A1-AS1Q5SY13 56 aa9.77□□□□□ -0.85
FOXN4-203ENST00000423960 TRBV20-1A0A075B6N2 111 aa9.75□□□□□ -0.85
FOXN4-203ENST00000423960 Q6JHZ5 121 aa9.75□□□□□ -0.85
FOXN4-203ENST00000423960 HRCT1Q6UXD1 115 aa9.75□□□□□ -0.85
FOXN4-203ENST00000423960 A0A0G2JQZ4 141 aa9.74□□□□□ -0.85
FOXN4-203ENST00000423960 A0A1W2PPM0 123 aa9.74□□□□□ -0.85
FOXN4-203ENST00000423960 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
FOXN4-203ENST00000423960 CD164Q04900 197 aa9.74□□□□□ -0.85
FOXN4-203ENST00000423960 H3BMG7 143 aa9.72□□□□□ -0.85
FOXN4-203ENST00000423960 BAALC-AS2P0C853 105 aa9.72□□□□□ -0.85
FOXN4-203ENST00000423960 IGFL1Q6UW32 110 aa9.72□□□□□ -0.85
FOXN4-203ENST00000423960 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
FOXN4-203ENST00000423960 RNF213Q63HN8 5207 aa9.71□□□□□ -0.86
FOXN4-203ENST00000423960 PRR4Q16378 134 aa9.7□□□□□ -0.86
FOXN4-203ENST00000423960 RETNLBQ9BQ08 111 aa9.68□□□□□ -0.86
FOXN4-203ENST00000423960 LIMD2Q9BT23 127 aa9.67□□□□□ -0.86
FOXN4-203ENST00000423960 ANKRD29Q8N6D5 301 aa9.66□□□□□ -0.86
FOXN4-203ENST00000423960 A0A1B0GV72 72 aa9.64□□□□□ -0.87
FOXN4-203ENST00000423960 C9JAW5 83 aa9.64□□□□□ -0.87
FOXN4-203ENST00000423960 LPAP08519 4548 aa9.63□□□□□ -0.87
FOXN4-203ENST00000423960 Q5XG85 94 aa9.63□□□□□ -0.87
FOXN4-203ENST00000423960 SPCS1Q9Y6A9 102 aa9.63□□□□□ -0.87
FOXN4-203ENST00000423960 TRBV7-7A0A0K0K1E9 115 aa9.62□□□□□ -0.87
FOXN4-203ENST00000423960 RBM3P98179 157 aaKnown RBP9.61□□□□□ -0.87
FOXN4-203ENST00000423960 TEN1Q86WV5 123 aa9.61□□□□□ -0.87
FOXN4-203ENST00000423960 Q6Q795 121 aa9.6□□□□□ -0.87
FOXN4-203ENST00000423960 FP248Q71RG6 208 aaPredicted RBP9.6□□□□□ -0.87
FOXN4-203ENST00000423960 IGLV7-46A0A075B6I9 117 aa9.59□□□□□ -0.87
FOXN4-203ENST00000423960 A0A1W2PNM2 257 aa9.57□□□□□ -0.88
FOXN4-203ENST00000423960 DSCR8Q96T75 97 aa9.57□□□□□ -0.88
FOXN4-203ENST00000423960 JMJD7-PLA2G4BH0Y9G9 81 aa9.56□□□□□ -0.88
FOXN4-203ENST00000423960 H3BT86 120 aa9.56□□□□□ -0.88
FOXN4-203ENST00000423960 TRBV7-4A0A0J9YYF1 115 aa9.55□□□□□ -0.88
FOXN4-203ENST00000423960 K7EP34 96 aa9.55□□□□□ -0.88
FOXN4-203ENST00000423960 MTURNQ8N3F0 131 aa9.55□□□□□ -0.88
FOXN4-203ENST00000423960 C1orf195Q5TG92 126 aa9.54□□□□□ -0.88
FOXN4-203ENST00000423960 CCKP06307 115 aa9.53□□□□□ -0.88
FOXN4-203ENST00000423960 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
FOXN4-203ENST00000423960 A0A087WSZ3 146 aa9.52□□□□□ -0.89
FOXN4-203ENST00000423960 GTF2H5Q6ZYL4 71 aa9.51□□□□□ -0.89
FOXN4-203ENST00000423960 OBSCN-AS1Q96MR7 158 aa9.51□□□□□ -0.89
FOXN4-203ENST00000423960 SS18L2Q9UHA2 77 aa9.51□□□□□ -0.89
FOXN4-203ENST00000423960 VPS25Q9BRG1 176 aa9.5□□□□□ -0.89
FOXN4-203ENST00000423960 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
FOXN4-203ENST00000423960 LOC110117498A0A087WWA1 95 aa9.48□□□□□ -0.89
FOXN4-203ENST00000423960 PDE6GP18545 87 aa9.48□□□□□ -0.89
FOXN4-203ENST00000423960 Q6ZQT0 140 aa9.47□□□□□ -0.89
FOXN4-203ENST00000423960 C14orf132Q9NPU4 83 aa9.47□□□□□ -0.89
FOXN4-203ENST00000423960 SMCPP49901 116 aaPredicted RBP9.46□□□□□ -0.9
FOXN4-203ENST00000423960 PRO0461Q9UI25 63 aa9.46□□□□□ -0.9
FOXN4-203ENST00000423960 KRTAP13-3Q3SY46 172 aa9.45□□□□□ -0.9
FOXN4-203ENST00000423960 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
FOXN4-203ENST00000423960 C21orf62-AS1Q17RA5 79 aa9.42□□□□□ -0.9
FOXN4-203ENST00000423960 A0A1B0GW54 56 aa9.4□□□□□ -0.9
FOXN4-203ENST00000423960 F8W1H4 67 aa9.4□□□□□ -0.9
FOXN4-203ENST00000423960 Q96NJ1 140 aa9.39□□□□□ -0.91
FOXN4-203ENST00000423960 MUC2Q02817 5179 aa9.36□□□□□ -0.91
FOXN4-203ENST00000423960 C9orf92A6NGG3 77 aa9.36□□□□□ -0.91
FOXN4-203ENST00000423960 LINC00472Q9H8W2 130 aa9.35□□□□□ -0.91
FOXN4-203ENST00000423960 IGKV4-1P06312 121 aa9.33□□□□□ -0.92
FOXN4-203ENST00000423960 DEFB116Q30KQ4 102 aa9.32□□□□□ -0.92
FOXN4-203ENST00000423960 A0A1B0GV90 55 aa9.31□□□□□ -0.92
FOXN4-203ENST00000423960 XP32Q5T750 250 aa9.3□□□□□ -0.92
FOXN4-203ENST00000423960 SIGMAR1Q99720 223 aa9.3□□□□□ -0.92
FOXN4-203ENST00000423960 NREPQ16612 68 aa9.29□□□□□ -0.92
FOXN4-203ENST00000423960 ETDBQ3ZM63 59 aa9.29□□□□□ -0.92
FOXN4-203ENST00000423960 J3KT08 172 aa9.26□□□□□ -0.93
FOXN4-203ENST00000423960 MUC17Q685J3 4493 aa9.26□□□□□ -0.93
FOXN4-203ENST00000423960 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.94
FOXN4-203ENST00000423960 DSCR10P59022 87 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms