RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TSPAN13O95857 204 aa5.42□□□□□ -1.54
PDGFC-202ENST00000422544 SPRR1BP22528 89 aa5.42□□□□□ -1.54
PDGFC-202ENST00000422544 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
PDGFC-202ENST00000422544 FAM218AQ96MZ4 157 aa5.42□□□□□ -1.54
PDGFC-202ENST00000422544 IGLV5-48A0A075B6I7 105 aa5.41□□□□□ -1.54
PDGFC-202ENST00000422544 MOBPQ13875 183 aa5.41□□□□□ -1.54
PDGFC-202ENST00000422544 Q6ZQY7 126 aa5.41□□□□□ -1.54
PDGFC-202ENST00000422544 MUC2Q02817 5179 aa5.4□□□□□ -1.54
PDGFC-202ENST00000422544 BATFQ16520 125 aa5.4□□□□□ -1.54
PDGFC-202ENST00000422544 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.4□□□□□ -1.54
PDGFC-202ENST00000422544 Q8N377 158 aa5.4□□□□□ -1.54
PDGFC-202ENST00000422544 LAMTOR3Q9UHA4 124 aa5.4□□□□□ -1.54
PDGFC-202ENST00000422544 SNCGO76070 127 aa5.39□□□□□ -1.55
PDGFC-202ENST00000422544 COX6CP09669 75 aa5.39□□□□□ -1.55
PDGFC-202ENST00000422544 C9orf153Q5TBE3 101 aa5.39□□□□□ -1.55
PDGFC-202ENST00000422544 SSBP3-AS1Q7Z2R9 100 aa5.39□□□□□ -1.55
PDGFC-202ENST00000422544 SMIM29Q86T20 159 aa5.39□□□□□ -1.55
PDGFC-202ENST00000422544 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
PDGFC-202ENST00000422544 Q8NBF4 154 aa5.39□□□□□ -1.55
PDGFC-202ENST00000422544 CLEC2BQ92478 149 aa5.39□□□□□ -1.55
PDGFC-202ENST00000422544 SCGB1C2P0DMR2 95 aa5.38□□□□□ -1.55
PDGFC-202ENST00000422544 NAA38Q9BRA0 125 aaKnown RBP5.37□□□□□ -1.55
PDGFC-202ENST00000422544 A0A1B0GX51 115 aa5.36□□□□□ -1.55
PDGFC-202ENST00000422544 SPAG11AQ6PDA7 123 aa5.35□□□□□ -1.55
PDGFC-202ENST00000422544 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
PDGFC-202ENST00000422544 OCIAD2Q56VL3 154 aa5.34□□□□□ -1.55
PDGFC-202ENST00000422544 SNHG12Q9BXW3 62 aa5.34□□□□□ -1.55
PDGFC-202ENST00000422544 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
PDGFC-202ENST00000422544 PCP4L1A6NKN8 68 aa5.33□□□□□ -1.56
PDGFC-202ENST00000422544 F8WEM9 126 aa5.33□□□□□ -1.56
PDGFC-202ENST00000422544 DNAL4O96015 105 aa5.33□□□□□ -1.56
PDGFC-202ENST00000422544 HRCT1Q6UXD1 115 aa5.33□□□□□ -1.56
PDGFC-202ENST00000422544 PPDPFLQ8WWR9 84 aa5.33□□□□□ -1.56
PDGFC-202ENST00000422544 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
PDGFC-202ENST00000422544 H3BUT2 72 aa5.32□□□□□ -1.56
PDGFC-202ENST00000422544 LST1O00453 97 aa5.32□□□□□ -1.56
PDGFC-202ENST00000422544 TAX1BP3O14907 124 aa5.32□□□□□ -1.56
PDGFC-202ENST00000422544 SPINK1P00995 79 aa5.32□□□□□ -1.56
PDGFC-202ENST00000422544 FABP2P12104 132 aa5.32□□□□□ -1.56
PDGFC-202ENST00000422544 C9orf118A6NHY6 69 aa5.31□□□□□ -1.56
PDGFC-202ENST00000422544 TRACP01848 142 aa5.31□□□□□ -1.56
PDGFC-202ENST00000422544 NDUFV3P56181 108 aaKnown RBP5.31□□□□□ -1.56
PDGFC-202ENST00000422544 RETNLBQ9BQ08 111 aa5.31□□□□□ -1.56
PDGFC-202ENST00000422544 ORMDL1Q9P0S3 153 aa5.31□□□□□ -1.56
PDGFC-202ENST00000422544 IGLV8-61A0A075B6I0 122 aa5.3□□□□□ -1.56
PDGFC-202ENST00000422544 TCL1BO95988 128 aa5.3□□□□□ -1.56
PDGFC-202ENST00000422544 PRR4Q16378 134 aa5.3□□□□□ -1.56
PDGFC-202ENST00000422544 ATXN8Q156A1 80 aa5.29□□□□□ -1.56
PDGFC-202ENST00000422544 H3BQ85 93 aa5.28□□□□□ -1.56
PDGFC-202ENST00000422544 TMEM256-PLSCR3K7ERE1 68 aa5.28□□□□□ -1.56
PDGFC-202ENST00000422544 RPS29P62273 56 aaKnown RBP5.28□□□□□ -1.56
PDGFC-202ENST00000422544 CD164Q04900 197 aa5.28□□□□□ -1.56
PDGFC-202ENST00000422544 COL5A1-AS1Q5SY13 56 aa5.28□□□□□ -1.56
PDGFC-202ENST00000422544 Q6JHZ5 121 aa5.28□□□□□ -1.56
PDGFC-202ENST00000422544 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
PDGFC-202ENST00000422544 A0A1W2PPM0 123 aa5.27□□□□□ -1.57
PDGFC-202ENST00000422544 H3BMG7 143 aa5.27□□□□□ -1.57
PDGFC-202ENST00000422544 BAALC-AS2P0C853 105 aa5.27□□□□□ -1.57
PDGFC-202ENST00000422544 C21orf62-AS1Q17RA5 79 aa5.27□□□□□ -1.57
PDGFC-202ENST00000422544 LYRM7Q5U5X0 104 aa5.27□□□□□ -1.57
PDGFC-202ENST00000422544 TRBV20-1A0A075B6N2 111 aa5.26□□□□□ -1.57
PDGFC-202ENST00000422544 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
PDGFC-202ENST00000422544 A0A1B0GV72 72 aa5.26□□□□□ -1.57
PDGFC-202ENST00000422544 UBE2V1Q13404 147 aa5.25□□□□□ -1.57
PDGFC-202ENST00000422544 ANKRD29Q8N6D5 301 aa5.24□□□□□ -1.57
PDGFC-202ENST00000422544 LIMD2Q9BT23 127 aa5.24□□□□□ -1.57
PDGFC-202ENST00000422544 IGLV7-46A0A075B6I9 117 aa5.23□□□□□ -1.57
PDGFC-202ENST00000422544 TRBV7-7A0A0K0K1E9 115 aa5.23□□□□□ -1.57
PDGFC-202ENST00000422544 C9JAW5 83 aa5.23□□□□□ -1.57
PDGFC-202ENST00000422544 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
PDGFC-202ENST00000422544 Q5XG85 94 aa5.22□□□□□ -1.57
PDGFC-202ENST00000422544 SPCS1Q9Y6A9 102 aa5.22□□□□□ -1.57
PDGFC-202ENST00000422544 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
PDGFC-202ENST00000422544 A0A1W2PNM2 257 aa5.2□□□□□ -1.58
PDGFC-202ENST00000422544 RBM3P98179 157 aaKnown RBP5.2□□□□□ -1.58
PDGFC-202ENST00000422544 Q6Q795 121 aa5.2□□□□□ -1.58
PDGFC-202ENST00000422544 TEN1Q86WV5 123 aa5.2□□□□□ -1.58
PDGFC-202ENST00000422544 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
PDGFC-202ENST00000422544 C1orf195Q5TG92 126 aa5.19□□□□□ -1.58
PDGFC-202ENST00000422544 MTURNQ8N3F0 131 aa5.19□□□□□ -1.58
PDGFC-202ENST00000422544 DSCR8Q96T75 97 aa5.19□□□□□ -1.58
PDGFC-202ENST00000422544 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
PDGFC-202ENST00000422544 A0A087WSZ3 146 aa5.17□□□□□ -1.58
PDGFC-202ENST00000422544 TRBV7-4A0A0J9YYF1 115 aa5.17□□□□□ -1.58
PDGFC-202ENST00000422544 JMJD7-PLA2G4BH0Y9G9 81 aa5.17□□□□□ -1.58
PDGFC-202ENST00000422544 K7EP34 96 aa5.17□□□□□ -1.58
PDGFC-202ENST00000422544 CCKP06307 115 aa5.17□□□□□ -1.58
PDGFC-202ENST00000422544 H3BT86 120 aa5.16□□□□□ -1.58
PDGFC-202ENST00000422544 TPRXLQ17RH7 258 aa5.16□□□□□ -1.58
PDGFC-202ENST00000422544 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
PDGFC-202ENST00000422544 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
PDGFC-202ENST00000422544 VPS25Q9BRG1 176 aa5.16□□□□□ -1.58
PDGFC-202ENST00000422544 KRTAP13-3Q3SY46 172 aa5.15□□□□□ -1.59
PDGFC-202ENST00000422544 LCE3BQ5TA77 95 aa5.15□□□□□ -1.59
PDGFC-202ENST00000422544 CDIP1Q9H305 208 aa5.15□□□□□ -1.59
PDGFC-202ENST00000422544 OBSCN-AS1Q96MR7 158 aa5.14□□□□□ -1.59
PDGFC-202ENST00000422544 C14orf132Q9NPU4 83 aa5.14□□□□□ -1.59
PDGFC-202ENST00000422544 SS18L2Q9UHA2 77 aa5.14□□□□□ -1.59
PDGFC-202ENST00000422544 LOC110117498A0A087WWA1 95 aa5.13□□□□□ -1.59
PDGFC-202ENST00000422544 Q6ZQT0 140 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms