RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 MUSTN1Q8IVN3 82 aa4.38□□□□□ -1.71
VIM-202ENST00000421459 LINC00308Q8TCZ7 52 aa4.38□□□□□ -1.71
VIM-202ENST00000421459 COPS9Q8WXC6 57 aa4.38□□□□□ -1.71
VIM-202ENST00000421459 TRAV23DV6A0A075B6W5 121 aa4.37□□□□□ -1.71
VIM-202ENST00000421459 USH2AO75445 5202 aa4.37□□□□□ -1.71
VIM-202ENST00000421459 TMEM238LA0A1B0GVL6 79 aa4.36□□□□□ -1.71
VIM-202ENST00000421459 A4D1N5 150 aa4.36□□□□□ -1.71
VIM-202ENST00000421459 A6NDN8 102 aa4.36□□□□□ -1.71
VIM-202ENST00000421459 A6NJY4 79 aa4.36□□□□□ -1.71
VIM-202ENST00000421459 H7C2G1 150 aa4.36□□□□□ -1.71
VIM-202ENST00000421459 ZNF73O43830 326 aaPredicted RBP4.36□□□□□ -1.71
VIM-202ENST00000421459 COL5A1-AS1Q5SY13 56 aa4.36□□□□□ -1.71
VIM-202ENST00000421459 A0A0B4J2C4 111 aa4.35□□□□□ -1.71
VIM-202ENST00000421459 CFC1BP0CG36 223 aa4.35□□□□□ -1.71
VIM-202ENST00000421459 BATFQ16520 125 aa4.35□□□□□ -1.71
VIM-202ENST00000421459 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
VIM-202ENST00000421459 A0A0G2JQZ4 141 aa4.34□□□□□ -1.71
VIM-202ENST00000421459 M0R2T5 61 aa4.34□□□□□ -1.71
VIM-202ENST00000421459 NDUFC2O95298 119 aa4.34□□□□□ -1.71
VIM-202ENST00000421459 CFC1P0CG37 223 aa4.34□□□□□ -1.71
VIM-202ENST00000421459 NHP2Q9NX24 153 aaKnown RBP4.34□□□□□ -1.71
VIM-202ENST00000421459 K7ERJ3 54 aa4.33□□□□□ -1.72
VIM-202ENST00000421459 TAX1BP3O14907 124 aa4.33□□□□□ -1.72
VIM-202ENST00000421459 DEFB105AQ8NG35 78 aa4.33□□□□□ -1.72
VIM-202ENST00000421459 SPRR1BP22528 89 aa4.32□□□□□ -1.72
VIM-202ENST00000421459 Q1RN00 199 aa4.32□□□□□ -1.72
VIM-202ENST00000421459 OR13C6PQ8NH95 151 aa4.32□□□□□ -1.72
VIM-202ENST00000421459 LIMD2Q9BT23 127 aa4.32□□□□□ -1.72
VIM-202ENST00000421459 PRO1854Q9UHT4 67 aa4.32□□□□□ -1.72
VIM-202ENST00000421459 RAB37Q96AX2 223 aa4.31□□□□□ -1.72
VIM-202ENST00000421459 TRAV13-2A0A0B4J235 113 aa4.3□□□□□ -1.72
VIM-202ENST00000421459 C9orf118A6NHY6 69 aa4.3□□□□□ -1.72
VIM-202ENST00000421459 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
VIM-202ENST00000421459 LAMTOR3Q9UHA4 124 aa4.3□□□□□ -1.72
VIM-202ENST00000421459 COX6B2Q6YFQ2 88 aa4.29□□□□□ -1.72
VIM-202ENST00000421459 COX7BP24311 80 aa4.28□□□□□ -1.72
VIM-202ENST00000421459 RPL37P61927 97 aaKnown RBP4.28□□□□□ -1.72
VIM-202ENST00000421459 SMIM29Q86T20 159 aa4.28□□□□□ -1.72
VIM-202ENST00000421459 DHRS4-AS1Q9P1J3 65 aa4.28□□□□□ -1.72
VIM-202ENST00000421459 A0A1W2PPM0 123 aa4.27□□□□□ -1.73
VIM-202ENST00000421459 H3BUT2 72 aa4.27□□□□□ -1.73
VIM-202ENST00000421459 ELOF1P60002 83 aaKnown RBP4.27□□□□□ -1.73
VIM-202ENST00000421459 C6orf99Q4VX62 202 aa4.27□□□□□ -1.73
VIM-202ENST00000421459 A0A1B0GV90 55 aa4.26□□□□□ -1.73
VIM-202ENST00000421459 CD164Q04900 197 aa4.26□□□□□ -1.73
VIM-202ENST00000421459 NAA38Q9BRA0 125 aaKnown RBP4.26□□□□□ -1.73
VIM-202ENST00000421459 TEX49A0A1B0GTD5 131 aa4.25□□□□□ -1.73
VIM-202ENST00000421459 TRIAP1O43715 76 aa4.25□□□□□ -1.73
VIM-202ENST00000421459 Q6Q795 121 aa4.25□□□□□ -1.73
VIM-202ENST00000421459 SMIM11BQ8TCY0 68 aa4.25□□□□□ -1.73
VIM-202ENST00000421459 KRTAP4-8Q9BYQ9 185 aa4.25□□□□□ -1.73
VIM-202ENST00000421459 FABP2P12104 132 aa4.24□□□□□ -1.73
VIM-202ENST00000421459 LYRM7Q5U5X0 104 aa4.24□□□□□ -1.73
VIM-202ENST00000421459 Q5XG85 94 aa4.24□□□□□ -1.73
VIM-202ENST00000421459 CBY1Q9Y3M2 126 aa4.24□□□□□ -1.73
VIM-202ENST00000421459 TRBV20-1A0A075B6N2 111 aa4.23□□□□□ -1.73
VIM-202ENST00000421459 TRBV7-6A0A0J9YX20 115 aa4.23□□□□□ -1.73
VIM-202ENST00000421459 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
VIM-202ENST00000421459 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
VIM-202ENST00000421459 K7EP34 96 aa4.23□□□□□ -1.73
VIM-202ENST00000421459 COX6CP09669 75 aa4.23□□□□□ -1.73
VIM-202ENST00000421459 PSMB2P49721 201 aa4.23□□□□□ -1.73
VIM-202ENST00000421459 SPCS1Q9Y6A9 102 aa4.23□□□□□ -1.73
VIM-202ENST00000421459 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
VIM-202ENST00000421459 H0YGX0 51 aa4.22□□□□□ -1.73
VIM-202ENST00000421459 VAMP3Q15836 100 aa4.22□□□□□ -1.73
VIM-202ENST00000421459 IGLV5-48A0A075B6I7 105 aa4.21□□□□□ -1.74
VIM-202ENST00000421459 LST1O00453 97 aa4.21□□□□□ -1.74
VIM-202ENST00000421459 TCL1BO95988 128 aa4.21□□□□□ -1.74
VIM-202ENST00000421459 SCGB1C2P0DMR2 95 aa4.21□□□□□ -1.74
VIM-202ENST00000421459 GTF2H5Q6ZYL4 71 aa4.21□□□□□ -1.74
VIM-202ENST00000421459 A0A1B0GX51 115 aa4.2□□□□□ -1.74
VIM-202ENST00000421459 TRACP01848 142 aa4.2□□□□□ -1.74
VIM-202ENST00000421459 UBE2V1Q13404 147 aa4.2□□□□□ -1.74
VIM-202ENST00000421459 ATXN8Q156A1 80 aa4.2□□□□□ -1.74
VIM-202ENST00000421459 CLEC2BQ92478 149 aa4.2□□□□□ -1.74
VIM-202ENST00000421459 FAM218AQ96MZ4 157 aa4.2□□□□□ -1.74
VIM-202ENST00000421459 SMCPP49901 116 aaPredicted RBP4.19□□□□□ -1.74
VIM-202ENST00000421459 LINC00575Q6W349 94 aa4.19□□□□□ -1.74
VIM-202ENST00000421459 OBSCN-AS1Q96MR7 158 aa4.19□□□□□ -1.74
VIM-202ENST00000421459 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
VIM-202ENST00000421459 H3BMG7 143 aa4.18□□□□□ -1.74
VIM-202ENST00000421459 PRO0461Q9UI25 63 aa4.18□□□□□ -1.74
VIM-202ENST00000421459 F8W1H4 67 aa4.16□□□□□ -1.74
VIM-202ENST00000421459 ATP11AUNQ6ZP68 121 aa4.16□□□□□ -1.74
VIM-202ENST00000421459 hADV29S1A0JD25 119 aa4.15□□□□□ -1.75
VIM-202ENST00000421459 C9JAW5 83 aa4.15□□□□□ -1.75
VIM-202ENST00000421459 H3BT86 120 aa4.15□□□□□ -1.75
VIM-202ENST00000421459 IGFL1Q6UW32 110 aa4.15□□□□□ -1.75
VIM-202ENST00000421459 TRBV7-7A0A0K0K1E9 115 aa4.14□□□□□ -1.75
VIM-202ENST00000421459 SNCGO76070 127 aa4.14□□□□□ -1.75
VIM-202ENST00000421459 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.14□□□□□ -1.75
VIM-202ENST00000421459 Q75L30 129 aa4.14□□□□□ -1.75
VIM-202ENST00000421459 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
VIM-202ENST00000421459 F8WEM9 126 aa4.13□□□□□ -1.75
VIM-202ENST00000421459 DNAL4O96015 105 aa4.13□□□□□ -1.75
VIM-202ENST00000421459 OCIAD2Q56VL3 154 aa4.13□□□□□ -1.75
VIM-202ENST00000421459 Q6ZQY7 126 aa4.13□□□□□ -1.75
VIM-202ENST00000421459 ANKRD29Q8N6D5 301 aa4.13□□□□□ -1.75
VIM-202ENST00000421459 Q96NJ1 140 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms