RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 Q75L30 129 aa8.97□□□□□ -0.97
AP000550.1-201ENST00000420508 Q6ZR54 194 aa8.96□□□□□ -0.98
AP000550.1-201ENST00000420508 CYSTM1Q9H1C7 97 aa8.96□□□□□ -0.98
AP000550.1-201ENST00000420508 Q5XG85 94 aa8.95□□□□□ -0.98
AP000550.1-201ENST00000420508 LINC01558Q9Y6Z2 57 aa8.95□□□□□ -0.98
AP000550.1-201ENST00000420508 KMT2BQ9UMN6 2715 aaPredicted RBP8.95□□□□□ -0.98
AP000550.1-201ENST00000420508 VPS13AQ96RL7 3174 aa8.95□□□□□ -0.98
AP000550.1-201ENST00000420508 TEX15Q9BXT5 2789 aa8.94□□□□□ -0.98
AP000550.1-201ENST00000420508 SMR3BP02814 79 aaPredicted RBP8.92□□□□□ -0.98
AP000550.1-201ENST00000420508 HRES1P13985 223 aa8.92□□□□□ -0.98
AP000550.1-201ENST00000420508 C9orf92A6NGG3 77 aa8.92□□□□□ -0.98
AP000550.1-201ENST00000420508 KTN1-AS1Q86SY8 53 aa8.92□□□□□ -0.98
AP000550.1-201ENST00000420508 SETXQ7Z333 2677 aaKnown RBP8.92□□□□□ -0.98
AP000550.1-201ENST00000420508 KRTAP29-1A8MX34 341 aaPredicted RBP8.91□□□□□ -0.98
AP000550.1-201ENST00000420508 GCN1Q92616 2671 aaKnown RBP8.9□□□□□ -0.98
AP000550.1-201ENST00000420508 Q8N9P0 234 aaPredicted RBP8.9□□□□□ -0.99
AP000550.1-201ENST00000420508 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
AP000550.1-201ENST00000420508 TEP1Q99973 2627 aaKnown RBP8.89□□□□□ -0.99
AP000550.1-201ENST00000420508 TNRC18O15417 2968 aaPredicted RBP8.89□□□□□ -0.99
AP000550.1-201ENST00000420508 FP248Q71RG6 208 aaPredicted RBP8.89□□□□□ -0.99
AP000550.1-201ENST00000420508 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
AP000550.1-201ENST00000420508 LAMA1P25391 3075 aa8.87□□□□□ -0.99
AP000550.1-201ENST00000420508 FRYQ5TBA9 3013 aa8.87□□□□□ -0.99
AP000550.1-201ENST00000420508 RBM12B-AS1Q9P1G2 102 aa8.86□□□□□ -0.99
AP000550.1-201ENST00000420508 SZT2Q5T011 3432 aa8.86□□□□□ -0.99
AP000550.1-201ENST00000420508 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
AP000550.1-201ENST00000420508 PRR26Q8N8Z3 221 aa8.85□□□□□ -0.99
AP000550.1-201ENST00000420508 Q5W150 140 aa8.85□□□□□ -0.99
AP000550.1-201ENST00000420508 LCE6AA0A183 80 aa8.84□□□□□ -0.99
AP000550.1-201ENST00000420508 J3QL48 77 aa8.82□□□□□ -1
AP000550.1-201ENST00000420508 FLNCQ14315 2725 aa8.8□□□□□ -1
AP000550.1-201ENST00000420508 LCA10Q71F78 164 aa8.8□□□□□ -1
AP000550.1-201ENST00000420508 Q8N1X5 172 aa8.79□□□□□ -1
AP000550.1-201ENST00000420508 KRTAP7-1Q8IUC3 87 aa8.79□□□□□ -1
AP000550.1-201ENST00000420508 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
AP000550.1-201ENST00000420508 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
AP000550.1-201ENST00000420508 KRTAP10-1P60331 282 aa8.77□□□□□ -1.01
AP000550.1-201ENST00000420508 PANO1I0J062 215 aa8.76□□□□□ -1.01
AP000550.1-201ENST00000420508 DMAC1Q96GE9 116 aa8.76□□□□□ -1.01
AP000550.1-201ENST00000420508 XIRP2A4UGR9 3374 aa8.74□□□□□ -1.01
AP000550.1-201ENST00000420508 OXTP01178 125 aa8.74□□□□□ -1.01
AP000550.1-201ENST00000420508 Q5VV11 94 aa8.74□□□□□ -1.01
AP000550.1-201ENST00000420508 COL6A5A8TX70 2615 aa8.73□□□□□ -1.01
AP000550.1-201ENST00000420508 KRTAP10-2P60368 255 aa8.73□□□□□ -1.01
AP000550.1-201ENST00000420508 ITPR2Q14571 2701 aa8.71□□□□□ -1.01
AP000550.1-201ENST00000420508 ITPR1Q14643 2758 aa8.69□□□□□ -1.02
AP000550.1-201ENST00000420508 UTP20O75691 2785 aaKnown RBP8.69□□□□□ -1.02
AP000550.1-201ENST00000420508 A0A1B0GU33 70 aa8.68□□□□□ -1.02
AP000550.1-201ENST00000420508 KRTAP21-3Q3LHN1 58 aa8.68□□□□□ -1.02
AP000550.1-201ENST00000420508 CRIPTQ9P021 101 aa8.67□□□□□ -1.02
AP000550.1-201ENST00000420508 VCANP13611 3396 aa8.67□□□□□ -1.02
AP000550.1-201ENST00000420508 KRTAP11-1Q8IUC1 163 aa8.65□□□□□ -1.02
AP000550.1-201ENST00000420508 NSD1Q96L73 2696 aaPredicted RBP8.65□□□□□ -1.02
AP000550.1-201ENST00000420508 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.02
AP000550.1-201ENST00000420508 UBR5O95071 2799 aaPredicted RBP8.65□□□□□ -1.03
AP000550.1-201ENST00000420508 ATMQ13315 3056 aa8.64□□□□□ -1.03
AP000550.1-201ENST00000420508 Q6ZSA8 131 aa8.64□□□□□ -1.03
AP000550.1-201ENST00000420508 NBEAL2Q6ZNJ1 2754 aa8.64□□□□□ -1.03
AP000550.1-201ENST00000420508 NOTCH1P46531 2555 aa8.64□□□□□ -1.03
AP000550.1-201ENST00000420508 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
AP000550.1-201ENST00000420508 STAB1Q9NY15 2570 aa8.63□□□□□ -1.03
AP000550.1-201ENST00000420508 REV3LO60673 3130 aa8.63□□□□□ -1.03
AP000550.1-201ENST00000420508 LRBAP50851 2863 aa8.63□□□□□ -1.03
AP000550.1-201ENST00000420508 HRNRQ86YZ3 2850 aaPredicted RBP8.63□□□□□ -1.03
AP000550.1-201ENST00000420508 DNAH14Q0VDD8 3507 aa8.63□□□□□ -1.03
AP000550.1-201ENST00000420508 APCP25054 2843 aa8.62□□□□□ -1.03
AP000550.1-201ENST00000420508 NBEAQ8NFP9 2946 aa8.61□□□□□ -1.03
AP000550.1-201ENST00000420508 SPINK7P58062 85 aa8.61□□□□□ -1.03
AP000550.1-201ENST00000420508 MAP1AP78559 2803 aaPredicted RBP8.61□□□□□ -1.03
AP000550.1-201ENST00000420508 DMXL2Q8TDJ6 3036 aa8.61□□□□□ -1.03
AP000550.1-201ENST00000420508 KALRNO60229 2985 aa8.6□□□□□ -1.03
AP000550.1-201ENST00000420508 SPTBN5Q9NRC6 3674 aaKnown RBP8.58□□□□□ -1.04
AP000550.1-201ENST00000420508 A0A087X002 238 aa8.57□□□□□ -1.04
AP000550.1-201ENST00000420508 FRYLO94915 3013 aa8.57□□□□□ -1.04
AP000550.1-201ENST00000420508 S4R3F8 94 aa8.54□□□□□ -1.04
AP000550.1-201ENST00000420508 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
AP000550.1-201ENST00000420508 BOD1L1Q8NFC6 3051 aa8.53□□□□□ -1.04
AP000550.1-201ENST00000420508 CSAG1Q6PB30 78 aa8.53□□□□□ -1.04
AP000550.1-201ENST00000420508 CELSR3Q9NYQ7 3312 aa8.52□□□□□ -1.04
AP000550.1-201ENST00000420508 EYSQ5T1H1 3165 aa8.52□□□□□ -1.05
AP000550.1-201ENST00000420508 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
AP000550.1-201ENST00000420508 Q5VSD8 79 aa8.52□□□□□ -1.05
AP000550.1-201ENST00000420508 NBEAL1Q6ZS30 2694 aa8.52□□□□□ -1.05
AP000550.1-201ENST00000420508 BAHCC1Q9P281 2608 aa8.51□□□□□ -1.05
AP000550.1-201ENST00000420508 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
AP000550.1-201ENST00000420508 COL6A3P12111 3177 aa8.49□□□□□ -1.05
AP000550.1-201ENST00000420508 NIPBLQ6KC79 2804 aaeCLIP8.47□□□□□ -1.05
AP000550.1-201ENST00000420508 SEC61BP60468 96 aaKnown RBP8.47□□□□□ -1.05
AP000550.1-201ENST00000420508 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
AP000550.1-201ENST00000420508 KRTAP13-2Q52LG2 175 aa8.46□□□□□ -1.06
AP000550.1-201ENST00000420508 A0A0D9SG42 100 aa8.44□□□□□ -1.06
AP000550.1-201ENST00000420508 ZZEF1O43149 2961 aa8.43□□□□□ -1.06
AP000550.1-201ENST00000420508 DMXL1Q9Y485 3027 aa8.41□□□□□ -1.06
AP000550.1-201ENST00000420508 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
AP000550.1-201ENST00000420508 SPATA8Q6RVD6 105 aa8.4□□□□□ -1.06
AP000550.1-201ENST00000420508 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
AP000550.1-201ENST00000420508 FREM2Q5SZK8 3169 aa8.36□□□□□ -1.07
AP000550.1-201ENST00000420508 LINC01554Q52M75 96 aa8.35□□□□□ -1.07
AP000550.1-201ENST00000420508 TACC2O95359 2948 aa8.35□□□□□ -1.07
AP000550.1-201ENST00000420508 USP34Q70CQ2 3546 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms