RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 SCGB1C2P0DMR2 95 aa11.77□□□□□ -0.53
EGFR-204ENST00000420316 SSBP3-AS1Q7Z2R9 100 aa11.76□□□□□ -0.53
EGFR-204ENST00000420316 A0A0G2JQZ4 141 aa11.74□□□□□ -0.53
EGFR-204ENST00000420316 SNHG12Q9BXW3 62 aa11.74□□□□□ -0.53
EGFR-204ENST00000420316 SNCGO76070 127 aa11.73□□□□□ -0.53
EGFR-204ENST00000420316 SPAG11AQ6PDA7 123 aa11.73□□□□□ -0.53
EGFR-204ENST00000420316 A0A1B0GX51 115 aa11.71□□□□□ -0.54
EGFR-204ENST00000420316 H3BUT2 72 aa11.69□□□□□ -0.54
EGFR-204ENST00000420316 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
EGFR-204ENST00000420316 HRCT1Q6UXD1 115 aa11.69□□□□□ -0.54
EGFR-204ENST00000420316 TAX1BP3O14907 124 aa11.68□□□□□ -0.54
EGFR-204ENST00000420316 DNAL4O96015 105 aa11.67□□□□□ -0.54
EGFR-204ENST00000420316 LST1O00453 97 aa11.67□□□□□ -0.54
EGFR-204ENST00000420316 F8WEM9 126 aa11.66□□□□□ -0.54
EGFR-204ENST00000420316 TCL1BO95988 128 aa11.66□□□□□ -0.54
EGFR-204ENST00000420316 FABP2P12104 132 aa11.66□□□□□ -0.54
EGFR-204ENST00000420316 RETNLBQ9BQ08 111 aa11.65□□□□□ -0.54
EGFR-204ENST00000420316 SPINK1P00995 79 aa11.64□□□□□ -0.55
EGFR-204ENST00000420316 OCIAD2Q56VL3 154 aa11.64□□□□□ -0.55
EGFR-204ENST00000420316 C9orf118A6NHY6 69 aa11.63□□□□□ -0.55
EGFR-204ENST00000420316 PPDPFLQ8WWR9 84 aa11.63□□□□□ -0.55
EGFR-204ENST00000420316 ORMDL1Q9P0S3 153 aa11.62□□□□□ -0.55
EGFR-204ENST00000420316 A0A1B0GV72 72 aa11.62□□□□□ -0.55
EGFR-204ENST00000420316 TRACP01848 142 aa11.62□□□□□ -0.55
EGFR-204ENST00000420316 NDUFV3P56181 108 aaKnown RBP11.61□□□□□ -0.55
EGFR-204ENST00000420316 RPS29P62273 56 aaKnown RBP11.59□□□□□ -0.55
EGFR-204ENST00000420316 ATXN8Q156A1 80 aa11.58□□□□□ -0.55
EGFR-204ENST00000420316 PRR4Q16378 134 aa11.58□□□□□ -0.56
EGFR-204ENST00000420316 IGFL1Q6UW32 110 aa11.58□□□□□ -0.56
EGFR-204ENST00000420316 A0A1W2PPM0 123 aa11.57□□□□□ -0.56
EGFR-204ENST00000420316 COL5A1-AS1Q5SY13 56 aa11.57□□□□□ -0.56
EGFR-204ENST00000420316 IGLV8-61A0A075B6I0 122 aa11.56□□□□□ -0.56
EGFR-204ENST00000420316 GHRHP01286 108 aa11.56□□□□□ -0.56
EGFR-204ENST00000420316 H3BMG7 143 aa11.54□□□□□ -0.56
EGFR-204ENST00000420316 CD164Q04900 197 aa11.54□□□□□ -0.56
EGFR-204ENST00000420316 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
EGFR-204ENST00000420316 TMEM256-PLSCR3K7ERE1 68 aa11.53□□□□□ -0.56
EGFR-204ENST00000420316 BAALC-AS2P0C853 105 aa11.53□□□□□ -0.56
EGFR-204ENST00000420316 LRP2P98164 4655 aa11.51□□□□□ -0.57
EGFR-204ENST00000420316 Q6JHZ5 121 aa11.51□□□□□ -0.57
EGFR-204ENST00000420316 TRBV20-1A0A075B6N2 111 aa11.5□□□□□ -0.57
EGFR-204ENST00000420316 C9JAW5 83 aa11.49□□□□□ -0.57
EGFR-204ENST00000420316 H3BQ85 93 aa11.49□□□□□ -0.57
EGFR-204ENST00000420316 MTURNQ8N3F0 131 aa11.49□□□□□ -0.57
EGFR-204ENST00000420316 LPAP08519 4548 aa11.49□□□□□ -0.57
EGFR-204ENST00000420316 UBE2V1Q13404 147 aa11.47□□□□□ -0.57
EGFR-204ENST00000420316 ANKRD29Q8N6D5 301 aa11.46□□□□□ -0.57
EGFR-204ENST00000420316 LIMD2Q9BT23 127 aa11.46□□□□□ -0.57
EGFR-204ENST00000420316 FP248Q71RG6 208 aaPredicted RBP11.45□□□□□ -0.58
EGFR-204ENST00000420316 SPCS1Q9Y6A9 102 aa11.45□□□□□ -0.58
EGFR-204ENST00000420316 IGLV7-46A0A075B6I9 117 aa11.42□□□□□ -0.58
EGFR-204ENST00000420316 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
EGFR-204ENST00000420316 Q5XG85 94 aa11.41□□□□□ -0.58
EGFR-204ENST00000420316 A0A1W2PNM2 257 aa11.4□□□□□ -0.58
EGFR-204ENST00000420316 UBR4Q5T4S7 5183 aa11.4□□□□□ -0.59
EGFR-204ENST00000420316 RBM3P98179 157 aaKnown RBP11.37□□□□□ -0.59
EGFR-204ENST00000420316 TPRXLQ17RH7 258 aa11.37□□□□□ -0.59
EGFR-204ENST00000420316 TEN1Q86WV5 123 aa11.37□□□□□ -0.59
EGFR-204ENST00000420316 C1orf195Q5TG92 126 aa11.35□□□□□ -0.59
EGFR-204ENST00000420316 TRBV7-4A0A0J9YYF1 115 aa11.34□□□□□ -0.59
EGFR-204ENST00000420316 K7EP34 96 aa11.34□□□□□ -0.59
EGFR-204ENST00000420316 Q6Q795 121 aa11.34□□□□□ -0.59
EGFR-204ENST00000420316 VPS25Q9BRG1 176 aa11.34□□□□□ -0.59
EGFR-204ENST00000420316 A0A087WSZ3 146 aa11.33□□□□□ -0.6
EGFR-204ENST00000420316 CCKP06307 115 aa11.33□□□□□ -0.6
EGFR-204ENST00000420316 DSCR8Q96T75 97 aa11.33□□□□□ -0.6
EGFR-204ENST00000420316 H3BT86 120 aa11.31□□□□□ -0.6
EGFR-204ENST00000420316 SMCPP49901 116 aaPredicted RBP11.3□□□□□ -0.6
EGFR-204ENST00000420316 C14orf132Q9NPU4 83 aa11.3□□□□□ -0.6
EGFR-204ENST00000420316 JMJD7-PLA2G4BH0Y9G9 81 aa11.28□□□□□ -0.6
EGFR-204ENST00000420316 ASB16-AS1Q495Z4 193 aa11.28□□□□□ -0.6
EGFR-204ENST00000420316 KRTAP13-3Q3SY46 172 aa11.27□□□□□ -0.61
EGFR-204ENST00000420316 CDIP1Q9H305 208 aa11.26□□□□□ -0.61
EGFR-204ENST00000420316 PRO0461Q9UI25 63 aa11.26□□□□□ -0.61
EGFR-204ENST00000420316 OBSCN-AS1Q96MR7 158 aa11.25□□□□□ -0.61
EGFR-204ENST00000420316 Q6ZQT0 140 aa11.24□□□□□ -0.61
EGFR-204ENST00000420316 SS18L2Q9UHA2 77 aa11.24□□□□□ -0.61
EGFR-204ENST00000420316 GTF2H5Q6ZYL4 71 aa11.23□□□□□ -0.61
EGFR-204ENST00000420316 C9orf92A6NGG3 77 aa11.22□□□□□ -0.61
EGFR-204ENST00000420316 LOC110117498A0A087WWA1 95 aa11.21□□□□□ -0.61
EGFR-204ENST00000420316 Q96NJ1 140 aa11.2□□□□□ -0.62
EGFR-204ENST00000420316 DEFB116Q30KQ4 102 aa11.18□□□□□ -0.62
EGFR-204ENST00000420316 RNF213Q63HN8 5207 aa11.13□□□□□ -0.63
EGFR-204ENST00000420316 A0A1B0GV90 55 aa11.13□□□□□ -0.63
EGFR-204ENST00000420316 PDE6GP18545 87 aa11.13□□□□□ -0.63
EGFR-204ENST00000420316 SIGMAR1Q99720 223 aa11.11□□□□□ -0.63
EGFR-204ENST00000420316 IGKV4-1P06312 121 aa11.1□□□□□ -0.63
EGFR-204ENST00000420316 XP32Q5T750 250 aa11.1□□□□□ -0.63
EGFR-204ENST00000420316 LINC00472Q9H8W2 130 aa11.1□□□□□ -0.63
EGFR-204ENST00000420316 F8W1H4 67 aa11.09□□□□□ -0.63
EGFR-204ENST00000420316 C21orf62-AS1Q17RA5 79 aa11.07□□□□□ -0.64
EGFR-204ENST00000420316 ETDBQ3ZM63 59 aa11.07□□□□□ -0.64
EGFR-204ENST00000420316 MUC17Q685J3 4493 aa11.06□□□□□ -0.64
EGFR-204ENST00000420316 A0A1B0GW54 56 aa11.03□□□□□ -0.64
EGFR-204ENST00000420316 DSCR10P59022 87 aa11□□□□□ -0.65
EGFR-204ENST00000420316 SEC61BP60468 96 aaKnown RBP10.99□□□□□ -0.65
EGFR-204ENST00000420316 NREPQ16612 68 aa10.99□□□□□ -0.65
EGFR-204ENST00000420316 MUC2Q02817 5179 aa10.98□□□□□ -0.65
EGFR-204ENST00000420316 IGHV6-1A0A0B4J1U7 121 aa10.96□□□□□ -0.65
EGFR-204ENST00000420316 NOTCH2NLQ7Z3S9 236 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms