RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ROMO1P60602 79 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 LY6EQ16553 131 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 DEFB109BQ30KR1 87 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 CSAG1Q6PB30 78 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 CLPSL2Q6UWE3 100 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 UNQ6190/PRO20217Q6UXQ8 127 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 ADM2Q7Z4H4 148 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 WNK2Q9Y3S1 2297 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 TENM4Q6N022 2769 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 ABCA4P78363 2273 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 DOPEY1Q5JWR5 2465 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 MYO18BQ8IUG5 2567 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 IGLV1-50A0A075B6I6 118 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 A0A1B0GU69 56 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 MIR22HGQ0VDD5 57 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 CAMK2N1Q7Z7J9 78 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 DEFB105AQ8NG35 78 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 SMG1Q96Q15 3661 aaKnown RBP1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 ITPR1Q14643 2758 aa1.98□□□□□ -2.09
SDCBPP3-201ENST00000419629 DSPP15924 2871 aaKnown RBP1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 URB1O60287 2271 aaKnown RBP1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 AHCTF1Q8WYP5 2266 aa1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 HRES1P13985 223 aa1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 ACYP2P14621 99 aa1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 Q6ZRX8 168 aa1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 CAMK2N2Q96S95 79 aa1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 C6orf48Q9UBA6 75 aa1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 PRO0255Q9UI72 69 aa1.97□□□□□ -2.09
SDCBPP3-201ENST00000419629 WDFY3Q8IZQ1 3526 aa1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 PTPN13Q12923 2485 aa1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 TEX15Q9BXT5 2789 aa1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 EP300Q09472 2414 aaPredicted RBP1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 MSMBP08118 114 aa1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 CHTF8P0CG12 524 aa1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 PCOTHQ58A44 107 aa1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 BRD3OSQ6XYD6 125 aa1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 C4orf3Q8WVX3 66 aa1.96□□□□□ -2.1
SDCBPP3-201ENST00000419629 IGSF10Q6WRI0 2623 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 OTOGLQ3ZCN5 2332 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 FREM2Q5SZK8 3169 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 DOPEY2Q9Y3R5 2298 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 IGLV10-54A0A075B6I4 117 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 A0A087WSZ3 146 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 IGKV2-24A0A0C4DH68 120 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 SPRR1AP35321 89 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 DEFB116Q30KQ4 102 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 KRTAP25-1Q3LHN0 102 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 LELP1Q5T871 98 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 ITPR3Q14573 2671 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 PIEZO2Q9H5I5 2752 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 DMXL2Q8TDJ6 3036 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 CFAP46Q8IYW2 2715 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 FBN3Q75N90 2809 aa1.95□□□□□ -2.1
SDCBPP3-201ENST00000419629 C2CD3Q4AC94 2353 aa1.94□□□□□ -2.1
SDCBPP3-201ENST00000419629 MMP24-AS1A0A0U1RRL7 71 aa1.94□□□□□ -2.1
SDCBPP3-201ENST00000419629 IGFL1Q6UW32 110 aa1.94□□□□□ -2.1
SDCBPP3-201ENST00000419629 FBN2P35556 2912 aa1.94□□□□□ -2.1
SDCBPP3-201ENST00000419629 MYO9AB2RTY4 2548 aa1.94□□□□□ -2.1
SDCBPP3-201ENST00000419629 CEP295Q9C0D2 2601 aa1.94□□□□□ -2.1
SDCBPP3-201ENST00000419629 HECTD1Q9ULT8 2610 aa1.94□□□□□ -2.1
SDCBPP3-201ENST00000419629 RELNP78509 3460 aa1.94□□□□□ -2.1
SDCBPP3-201ENST00000419629 ABCA12Q86UK0 2595 aa1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 DEFB130BP0DP73 79 aa1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 DEFB130AP0DP74 79 aa1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 DMAC1Q96GE9 116 aa1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 KALRNO60229 2985 aa1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 DNHD1Q96M86 4753 aa1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 CNOT1A5YKK6 2376 aaKnown RBP1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 SPTBN1Q01082 2364 aaKnown RBP1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 IGF2RP11717 2491 aa1.93□□□□□ -2.1
SDCBPP3-201ENST00000419629 PKDREJQ9NTG1 2253 aa1.92□□□□□ -2.1
SDCBPP3-201ENST00000419629 SPTAN1Q13813 2472 aaKnown RBP1.92□□□□□ -2.1
SDCBPP3-201ENST00000419629 TLX1NBP0CAT3 122 aa1.92□□□□□ -2.1
SDCBPP3-201ENST00000419629 C10orf99Q6UWK7 81 aa1.92□□□□□ -2.1
SDCBPP3-201ENST00000419629 LINC00472Q9H8W2 130 aa1.92□□□□□ -2.1
SDCBPP3-201ENST00000419629 COL12A1Q99715 3063 aa1.92□□□□□ -2.1
SDCBPP3-201ENST00000419629 SPTA1P02549 2419 aa1.91□□□□□ -2.1
SDCBPP3-201ENST00000419629 RPL37AP61513 92 aaKnown RBP1.91□□□□□ -2.1
SDCBPP3-201ENST00000419629 DEFB136Q30KP8 78 aa1.91□□□□□ -2.1
SDCBPP3-201ENST00000419629 MRPL34Q9BQ48 92 aaKnown RBP1.91□□□□□ -2.1
SDCBPP3-201ENST00000419629 C8orf17Q9NRJ1 99 aa1.91□□□□□ -2.1
SDCBPP3-201ENST00000419629 AKAP13Q12802 2813 aa1.91□□□□□ -2.1
SDCBPP3-201ENST00000419629 MED13LQ71F56 2210 aa1.91□□□□□ -2.1
SDCBPP3-201ENST00000419629 SORL1Q92673 2214 aa1.91□□□□□ -2.1
SDCBPP3-201ENST00000419629 ZFHX3Q15911 3703 aa1.9□□□□□ -2.1
SDCBPP3-201ENST00000419629 UBR5O95071 2799 aaPredicted RBP1.9□□□□□ -2.1
SDCBPP3-201ENST00000419629 WNK1Q9H4A3 2382 aa1.9□□□□□ -2.11
SDCBPP3-201ENST00000419629 A0A096LPF7 62 aa1.9□□□□□ -2.11
SDCBPP3-201ENST00000419629 SPRR1BP22528 89 aa1.9□□□□□ -2.11
SDCBPP3-201ENST00000419629 KRTAP10-10P60014 251 aa1.9□□□□□ -2.11
SDCBPP3-201ENST00000419629 LINC00483Q53H64 154 aa1.9□□□□□ -2.11
SDCBPP3-201ENST00000419629 LAMA5O15230 3695 aa1.89□□□□□ -2.11
SDCBPP3-201ENST00000419629 NUPR2A6NF83 97 aa1.89□□□□□ -2.11
SDCBPP3-201ENST00000419629 K7ERS5 55 aa1.89□□□□□ -2.11
SDCBPP3-201ENST00000419629 IGLV7-43P04211 117 aa1.89□□□□□ -2.11
SDCBPP3-201ENST00000419629 C15orf56Q8N910 161 aa1.89□□□□□ -2.11
SDCBPP3-201ENST00000419629 A0A1B0GVX0 72 aa1.88□□□□□ -2.11
SDCBPP3-201ENST00000419629 A8MUU9 505 aa1.88□□□□□ -2.11
SDCBPP3-201ENST00000419629 SDK1Q7Z5N4 2213 aa1.88□□□□□ -2.11
SDCBPP3-201ENST00000419629 LAMA1P25391 3075 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms