RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 Q8NBF4 154 aa7.25□□□□□ -1.25
SKA1-203ENST00000417656 C9orf153Q5TBE3 101 aa7.24□□□□□ -1.25
SKA1-203ENST00000417656 DEFB105AQ8NG35 78 aa7.24□□□□□ -1.25
SKA1-203ENST00000417656 NHP2Q9NX24 153 aaKnown RBP7.24□□□□□ -1.25
SKA1-203ENST00000417656 Q1RN00 199 aa7.23□□□□□ -1.25
SKA1-203ENST00000417656 LCE4AQ5TA78 99 aa7.23□□□□□ -1.25
SKA1-203ENST00000417656 LINC00575Q6W349 94 aa7.23□□□□□ -1.25
SKA1-203ENST00000417656 K7ERJ3 54 aa7.22□□□□□ -1.25
SKA1-203ENST00000417656 SLC25A20O43772 301 aa7.22□□□□□ -1.25
SKA1-203ENST00000417656 BVES-AS1Q5T3Y7 98 aa7.22□□□□□ -1.25
SKA1-203ENST00000417656 PRO1854Q9UHT4 67 aa7.22□□□□□ -1.25
SKA1-203ENST00000417656 IGLV5-48A0A075B6I7 105 aa7.21□□□□□ -1.26
SKA1-203ENST00000417656 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.26
SKA1-203ENST00000417656 TEX49A0A1B0GTD5 131 aa7.2□□□□□ -1.26
SKA1-203ENST00000417656 hADV29S1A0JD25 119 aa7.2□□□□□ -1.26
SKA1-203ENST00000417656 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
SKA1-203ENST00000417656 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
SKA1-203ENST00000417656 SPAG11AQ6PDA7 123 aa7.19□□□□□ -1.26
SKA1-203ENST00000417656 Q6ZQY7 126 aa7.19□□□□□ -1.26
SKA1-203ENST00000417656 SSBP3-AS1Q7Z2R9 100 aa7.18□□□□□ -1.26
SKA1-203ENST00000417656 RETNLBQ9BQ08 111 aa7.18□□□□□ -1.26
SKA1-203ENST00000417656 PRR4Q16378 134 aa7.17□□□□□ -1.26
SKA1-203ENST00000417656 SMIM29Q86T20 159 aa7.17□□□□□ -1.26
SKA1-203ENST00000417656 Q8N377 158 aa7.17□□□□□ -1.26
SKA1-203ENST00000417656 FAM218AQ96MZ4 157 aa7.17□□□□□ -1.26
SKA1-203ENST00000417656 TRIAP1O43715 76 aa7.16□□□□□ -1.26
SKA1-203ENST00000417656 LRP2P98164 4655 aa7.15□□□□□ -1.26
SKA1-203ENST00000417656 H0YGX0 51 aa7.15□□□□□ -1.26
SKA1-203ENST00000417656 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.15□□□□□ -1.26
SKA1-203ENST00000417656 TSTD3H0UI37 97 aa7.14□□□□□ -1.27
SKA1-203ENST00000417656 SPINK1P00995 79 aa7.14□□□□□ -1.27
SKA1-203ENST00000417656 PSMB2P49721 201 aa7.13□□□□□ -1.27
SKA1-203ENST00000417656 M0R143 59 aa7.12□□□□□ -1.27
SKA1-203ENST00000417656 CLEC2BQ92478 149 aa7.12□□□□□ -1.27
SKA1-203ENST00000417656 KRTAP4-11Q9BYQ6 195 aa7.12□□□□□ -1.27
SKA1-203ENST00000417656 F8WEM9 126 aa7.11□□□□□ -1.27
SKA1-203ENST00000417656 RPS29P62273 56 aaKnown RBP7.11□□□□□ -1.27
SKA1-203ENST00000417656 HRCT1Q6UXD1 115 aa7.11□□□□□ -1.27
SKA1-203ENST00000417656 LPAP08519 4548 aa7.1□□□□□ -1.27
SKA1-203ENST00000417656 A0A0G2JQZ4 141 aa7.1□□□□□ -1.27
SKA1-203ENST00000417656 SNCGO76070 127 aa7.1□□□□□ -1.27
SKA1-203ENST00000417656 PPDPFLQ8WWR9 84 aa7.09□□□□□ -1.27
SKA1-203ENST00000417656 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.28
SKA1-203ENST00000417656 A0A1B0GX51 115 aa7.08□□□□□ -1.28
SKA1-203ENST00000417656 COX6CP09669 75 aa7.07□□□□□ -1.28
SKA1-203ENST00000417656 OCIAD2Q56VL3 154 aa7.07□□□□□ -1.28
SKA1-203ENST00000417656 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
SKA1-203ENST00000417656 CD164Q04900 197 aa7.06□□□□□ -1.28
SKA1-203ENST00000417656 SNHG12Q9BXW3 62 aa7.06□□□□□ -1.28
SKA1-203ENST00000417656 IGLV8-61A0A075B6I0 122 aa7.05□□□□□ -1.28
SKA1-203ENST00000417656 KRTAP9-7A8MTY7 169 aa7.05□□□□□ -1.28
SKA1-203ENST00000417656 H3BUT2 72 aa7.05□□□□□ -1.28
SKA1-203ENST00000417656 DNAL4O96015 105 aa7.05□□□□□ -1.28
SKA1-203ENST00000417656 BATFQ16520 125 aa7.05□□□□□ -1.28
SKA1-203ENST00000417656 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
SKA1-203ENST00000417656 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
SKA1-203ENST00000417656 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
SKA1-203ENST00000417656 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
SKA1-203ENST00000417656 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
SKA1-203ENST00000417656 SCGB1C2P0DMR2 95 aa7.03□□□□□ -1.28
SKA1-203ENST00000417656 FABP2P12104 132 aa7.03□□□□□ -1.28
SKA1-203ENST00000417656 Q6JHZ5 121 aa7.03□□□□□ -1.28
SKA1-203ENST00000417656 NDUFV3P56181 108 aaKnown RBP7.02□□□□□ -1.29
SKA1-203ENST00000417656 ORMDL1Q9P0S3 153 aa7.02□□□□□ -1.29
SKA1-203ENST00000417656 LST1O00453 97 aa7.01□□□□□ -1.29
SKA1-203ENST00000417656 TPRXLQ17RH7 258 aa7.01□□□□□ -1.29
SKA1-203ENST00000417656 TRACP01848 142 aa7□□□□□ -1.29
SKA1-203ENST00000417656 A0A1B0GV90 55 aa6.99□□□□□ -1.29
SKA1-203ENST00000417656 A0A1B0GV72 72 aa6.98□□□□□ -1.29
SKA1-203ENST00000417656 H3BMG7 143 aa6.98□□□□□ -1.29
SKA1-203ENST00000417656 Q5XG85 94 aa6.98□□□□□ -1.29
SKA1-203ENST00000417656 TRBV7-7A0A0K0K1E9 115 aa6.97□□□□□ -1.29
SKA1-203ENST00000417656 TCL1BO95988 128 aa6.97□□□□□ -1.29
SKA1-203ENST00000417656 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
SKA1-203ENST00000417656 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
SKA1-203ENST00000417656 H3BQ85 93 aa6.96□□□□□ -1.3
SKA1-203ENST00000417656 TMEM256-PLSCR3K7ERE1 68 aa6.95□□□□□ -1.3
SKA1-203ENST00000417656 ATXN8Q156A1 80 aa6.95□□□□□ -1.3
SKA1-203ENST00000417656 H3BS24 57 aa6.94□□□□□ -1.3
SKA1-203ENST00000417656 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
SKA1-203ENST00000417656 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
SKA1-203ENST00000417656 LYRM7Q5U5X0 104 aa6.94□□□□□ -1.3
SKA1-203ENST00000417656 TAX1BP3O14907 124 aa6.93□□□□□ -1.3
SKA1-203ENST00000417656 UBE2V1Q13404 147 aa6.92□□□□□ -1.3
SKA1-203ENST00000417656 Q6Q795 121 aa6.92□□□□□ -1.3
SKA1-203ENST00000417656 RNF213Q63HN8 5207 aa6.92□□□□□ -1.3
SKA1-203ENST00000417656 C9orf118A6NHY6 69 aa6.91□□□□□ -1.3
SKA1-203ENST00000417656 TEN1Q86WV5 123 aa6.91□□□□□ -1.3
SKA1-203ENST00000417656 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
SKA1-203ENST00000417656 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.3
SKA1-203ENST00000417656 ASB16-AS1Q495Z4 193 aa6.9□□□□□ -1.3
SKA1-203ENST00000417656 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
SKA1-203ENST00000417656 A0A087WSZ3 146 aa6.89□□□□□ -1.31
SKA1-203ENST00000417656 TRBV20-1A0A075B6N2 111 aa6.88□□□□□ -1.31
SKA1-203ENST00000417656 A0A1W2PPM0 123 aa6.88□□□□□ -1.31
SKA1-203ENST00000417656 SS18L2Q9UHA2 77 aa6.88□□□□□ -1.31
SKA1-203ENST00000417656 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
SKA1-203ENST00000417656 C9JAW5 83 aa6.87□□□□□ -1.31
SKA1-203ENST00000417656 MUC17Q685J3 4493 aa6.86□□□□□ -1.31
SKA1-203ENST00000417656 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms