RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 ATRXP46100 2492 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 BAHCC1Q9P281 2608 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 IGKV2-24A0A0C4DH68 120 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 FAM168BA1KXE4 195 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 HTN3P15516 51 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 LINC00472Q9H8W2 130 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 SETXQ7Z333 2677 aaKnown RBP3.96□□□□□ -1.78
CCNT1-202ENST00000417344 CELSR2Q9HCU4 2923 aa3.96□□□□□ -1.78
CCNT1-202ENST00000417344 DEFB131BA0A096LNP1 70 aa3.95□□□□□ -1.78
CCNT1-202ENST00000417344 H0Y9J4 135 aa3.95□□□□□ -1.78
CCNT1-202ENST00000417344 TLX1NBP0CAT3 122 aa3.95□□□□□ -1.78
CCNT1-202ENST00000417344 Q6ZR54 194 aa3.95□□□□□ -1.78
CCNT1-202ENST00000417344 EPG5Q9HCE0 2579 aa3.95□□□□□ -1.78
CCNT1-202ENST00000417344 CHD8Q9HCK8 2581 aa3.95□□□□□ -1.78
CCNT1-202ENST00000417344 ZFHX2Q9C0A1 2572 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-202ENST00000417344 JMJD1CQ15652 2540 aa3.95□□□□□ -1.78
CCNT1-202ENST00000417344 RIF1Q5UIP0 2472 aaKnown RBP3.94□□□□□ -1.78
CCNT1-202ENST00000417344 DEFB135Q30KP9 77 aa3.94□□□□□ -1.78
CCNT1-202ENST00000417344 CSAG1Q6PB30 78 aa3.94□□□□□ -1.78
CCNT1-202ENST00000417344 REG3GQ6UW15 175 aa3.94□□□□□ -1.78
CCNT1-202ENST00000417344 TLN2Q9Y4G6 2542 aa3.94□□□□□ -1.78
CCNT1-202ENST00000417344 SPATA8Q6RVD6 105 aa3.94□□□□□ -1.78
CCNT1-202ENST00000417344 KRTAP7-1Q8IUC3 87 aa3.94□□□□□ -1.78
CCNT1-202ENST00000417344 MXRA5Q9NR99 2828 aa3.93□□□□□ -1.78
CCNT1-202ENST00000417344 APCP25054 2843 aa3.93□□□□□ -1.78
CCNT1-202ENST00000417344 SPART-AS1P0CW21 52 aa3.92□□□□□ -1.78
CCNT1-202ENST00000417344 NIPBLQ6KC79 2804 aaeCLIP3.92□□□□□ -1.78
CCNT1-202ENST00000417344 HIVEP3Q5T1R4 2406 aa3.91□□□□□ -1.78
CCNT1-202ENST00000417344 ACACBO00763 2458 aa3.91□□□□□ -1.78
CCNT1-202ENST00000417344 NBEAL2Q6ZNJ1 2754 aa3.91□□□□□ -1.78
CCNT1-202ENST00000417344 FN1P02751 2386 aaKnown RBP3.91□□□□□ -1.78
CCNT1-202ENST00000417344 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
CCNT1-202ENST00000417344 NF1P21359 2839 aa3.91□□□□□ -1.78
CCNT1-202ENST00000417344 ZNF292O60281 2723 aa3.91□□□□□ -1.78
CCNT1-202ENST00000417344 UTP20O75691 2785 aaKnown RBP3.91□□□□□ -1.78
CCNT1-202ENST00000417344 A0A1B0GU69 56 aa3.9□□□□□ -1.78
CCNT1-202ENST00000417344 PRLHP81277 87 aa3.9□□□□□ -1.78
CCNT1-202ENST00000417344 NCOR2Q9Y618 2525 aa3.9□□□□□ -1.78
CCNT1-202ENST00000417344 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
CCNT1-202ENST00000417344 ZNF706Q9Y5V0 76 aaPredicted RBP3.9□□□□□ -1.79
CCNT1-202ENST00000417344 OTOGQ6ZRI0 2925 aa3.9□□□□□ -1.79
CCNT1-202ENST00000417344 KMT2BQ9UMN6 2715 aaPredicted RBP3.89□□□□□ -1.79
CCNT1-202ENST00000417344 FAM208BQ5VWN6 2430 aa3.89□□□□□ -1.79
CCNT1-202ENST00000417344 MYO9AB2RTY4 2548 aa3.89□□□□□ -1.79
CCNT1-202ENST00000417344 ACYP2P14621 99 aa3.88□□□□□ -1.79
CCNT1-202ENST00000417344 ZANQ9Y493 2812 aa3.88□□□□□ -1.79
CCNT1-202ENST00000417344 CEP295Q9C0D2 2601 aa3.88□□□□□ -1.79
CCNT1-202ENST00000417344 FBN2P35556 2912 aa3.88□□□□□ -1.79
CCNT1-202ENST00000417344 UQCR11O14957 56 aa3.88□□□□□ -1.79
CCNT1-202ENST00000417344 C1orf134Q5TEV5 83 aa3.88□□□□□ -1.79
CCNT1-202ENST00000417344 C8orf17Q9NRJ1 99 aa3.88□□□□□ -1.79
CCNT1-202ENST00000417344 TEX15Q9BXT5 2789 aa3.87□□□□□ -1.79
CCNT1-202ENST00000417344 FASNP49327 2511 aaKnown RBP3.87□□□□□ -1.79
CCNT1-202ENST00000417344 ANKRD17O75179 2603 aaKnown RBP3.87□□□□□ -1.79
CCNT1-202ENST00000417344 LINC01556Q5JQF7 62 aa3.87□□□□□ -1.79
CCNT1-202ENST00000417344 ZFYVE26Q68DK2 2539 aa3.86□□□□□ -1.79
CCNT1-202ENST00000417344 PTPN13Q12923 2485 aa3.86□□□□□ -1.79
CCNT1-202ENST00000417344 H3BNG1 76 aa3.86□□□□□ -1.79
CCNT1-202ENST00000417344 SPRR1BP22528 89 aa3.86□□□□□ -1.79
CCNT1-202ENST00000417344 ANK3Q12955 4377 aaKnown RBP3.86□□□□□ -1.79
CCNT1-202ENST00000417344 GCN1Q92616 2671 aaKnown RBP3.86□□□□□ -1.79
CCNT1-202ENST00000417344 Q96NJ1 140 aa3.85□□□□□ -1.79
CCNT1-202ENST00000417344 MRPL34Q9BQ48 92 aaKnown RBP3.85□□□□□ -1.79
CCNT1-202ENST00000417344 ROMO1P60602 79 aa3.85□□□□□ -1.79
CCNT1-202ENST00000417344 ZNF861PO60384 105 aa3.84□□□□□ -1.79
CCNT1-202ENST00000417344 A0A096LNI7 61 aa3.83□□□□□ -1.8
CCNT1-202ENST00000417344 IGHV6-1A0A0B4J1U7 121 aa3.83□□□□□ -1.8
CCNT1-202ENST00000417344 DMAC1Q96GE9 116 aa3.83□□□□□ -1.8
CCNT1-202ENST00000417344 USP9YO00507 2555 aaPredicted RBP3.83□□□□□ -1.8
CCNT1-202ENST00000417344 A0A1B0GVX0 72 aa3.83□□□□□ -1.8
CCNT1-202ENST00000417344 ALMS1Q8TCU4 4167 aa3.82□□□□□ -1.8
CCNT1-202ENST00000417344 USP24Q9UPU5 2620 aa3.82□□□□□ -1.8
CCNT1-202ENST00000417344 K7EIL1 84 aa3.82□□□□□ -1.8
CCNT1-202ENST00000417344 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
CCNT1-202ENST00000417344 USP9XQ93008 2570 aaPredicted RBP3.82□□□□□ -1.8
CCNT1-202ENST00000417344 CASC10Q5T4H9 136 aa3.82□□□□□ -1.8
CCNT1-202ENST00000417344 CFAP46Q8IYW2 2715 aa3.82□□□□□ -1.8
CCNT1-202ENST00000417344 CSMD3Q7Z407 3707 aa3.81□□□□□ -1.8
CCNT1-202ENST00000417344 CDK2AP2O75956 126 aa3.81□□□□□ -1.8
CCNT1-202ENST00000417344 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
CCNT1-202ENST00000417344 DNAH10OSP0CZ25 163 aa3.8□□□□□ -1.8
CCNT1-202ENST00000417344 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
CCNT1-202ENST00000417344 FLNBO75369 2602 aaKnown RBP3.8□□□□□ -1.8
CCNT1-202ENST00000417344 KRTAP13-3Q3SY46 172 aa3.8□□□□□ -1.8
CCNT1-202ENST00000417344 Q5W150 140 aa3.8□□□□□ -1.8
CCNT1-202ENST00000417344 IGF2RP11717 2491 aa3.79□□□□□ -1.8
CCNT1-202ENST00000417344 DEFB113Q30KQ7 82 aa3.79□□□□□ -1.8
CCNT1-202ENST00000417344 KRTAP4-5Q9BYR2 181 aa3.79□□□□□ -1.8
CCNT1-202ENST00000417344 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
CCNT1-202ENST00000417344 TENM2Q9NT68 2774 aa3.78□□□□□ -1.8
CCNT1-202ENST00000417344 KRTAP10-3P60369 221 aa3.78□□□□□ -1.8
CCNT1-202ENST00000417344 MAST4O15021 2626 aa3.78□□□□□ -1.8
CCNT1-202ENST00000417344 KRTAP11-1Q8IUC1 163 aa3.77□□□□□ -1.81
CCNT1-202ENST00000417344 NAV2Q8IVL1 2488 aa3.77□□□□□ -1.81
CCNT1-202ENST00000417344 KRTAP10-9P60411 292 aa3.77□□□□□ -1.81
CCNT1-202ENST00000417344 UNC79Q9P2D8 2635 aa3.76□□□□□ -1.81
CCNT1-202ENST00000417344 TRRAPQ9Y4A5 3859 aa3.76□□□□□ -1.81
CCNT1-202ENST00000417344 SONP18583 2426 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms