RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 ETDBQ3ZM63 59 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 WFDC10BQ8IUB3 73 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 DAND5Q8N907 189 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 PRO1854Q9UHT4 67 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.57□□□□□ -1.84
EPHA4-204ENST00000415749 TRAV4A0A0B4J268 109 aa3.57□□□□□ -1.84
EPHA4-204ENST00000415749 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
EPHA4-204ENST00000415749 IBA57-AS1B1ANH7 110 aa3.57□□□□□ -1.84
EPHA4-204ENST00000415749 NDUFA1O15239 70 aa3.57□□□□□ -1.84
EPHA4-204ENST00000415749 COX6A2Q02221 97 aa3.57□□□□□ -1.84
EPHA4-204ENST00000415749 Q8N9L7 120 aa3.57□□□□□ -1.84
EPHA4-204ENST00000415749 CARD19Q96LW7 228 aa3.57□□□□□ -1.84
EPHA4-204ENST00000415749 PRO0255Q9UI72 69 aa3.57□□□□□ -1.84
EPHA4-204ENST00000415749 IGHV3-64A0A075B6Q5 118 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 TRGV1A0A0A0MS02 117 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.56□□□□□ -1.84
EPHA4-204ENST00000415749 TRBV30A0A0K0K1B3 111 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 SCGB1A1P11684 91 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 MIAQ16674 131 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 LYRM7Q5U5X0 104 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 CDKN2A-AS1Q9UH64 79 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 NDUFA12Q9UI09 145 aa3.56□□□□□ -1.84
EPHA4-204ENST00000415749 LOC107984156A0A0G2JMH3 177 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 H3BQ85 93 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 UBE2L6O14933 153 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 IFITM1P13164 125 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 LELP1Q5T871 98 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 TEN1Q86WV5 123 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 ARL17AQ8IVW1 177 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 C3orf22Q8N5N4 141 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 PPDPFLQ8WWR9 84 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 ZNF625Q96I27 306 aaPredicted RBP3.55□□□□□ -1.84
EPHA4-204ENST00000415749 CDC42SE2Q9NRR3 84 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 ERG28Q9UKR5 140 aa3.55□□□□□ -1.84
EPHA4-204ENST00000415749 TRBV6-4A0A1B0GX49 114 aa3.54□□□□□ -1.84
EPHA4-204ENST00000415749 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
EPHA4-204ENST00000415749 J3QR89 54 aa3.54□□□□□ -1.84
EPHA4-204ENST00000415749 LINC01556Q5JQF7 62 aa3.54□□□□□ -1.84
EPHA4-204ENST00000415749 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
EPHA4-204ENST00000415749 TRGV4A0A0C4DH28 118 aa3.53□□□□□ -1.84
EPHA4-204ENST00000415749 SFTA2Q6UW10 78 aa3.53□□□□□ -1.84
EPHA4-204ENST00000415749 SOSTDC1Q6X4U4 206 aa3.53□□□□□ -1.84
EPHA4-204ENST00000415749 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
EPHA4-204ENST00000415749 ATXN8Q156A1 80 aa3.52□□□□□ -1.85
EPHA4-204ENST00000415749 LINC00308Q8TCZ7 52 aa3.52□□□□□ -1.85
EPHA4-204ENST00000415749 C9JAW5 83 aa3.51□□□□□ -1.85
EPHA4-204ENST00000415749 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
EPHA4-204ENST00000415749 SDIM1Q6ZPB5 146 aa3.51□□□□□ -1.85
EPHA4-204ENST00000415749 TRBV6-8A0A0A6YYG3 113 aa3.5□□□□□ -1.85
EPHA4-204ENST00000415749 H3BT86 120 aa3.5□□□□□ -1.85
EPHA4-204ENST00000415749 IGLV4-60A0A075B6I1 120 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 IGKV2D-24A0A075B6R9 120 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 TRAV13-1A0A0B4J241 112 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 A0A1B0GW54 56 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 H7C2G1 150 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 MT-ATP8P03928 68 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 NPC2P61916 151 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 CIRBPQ14011 172 aaKnown RBP3.49□□□□□ -1.85
EPHA4-204ENST00000415749 C22orf24Q9Y442 160 aa3.49□□□□□ -1.85
EPHA4-204ENST00000415749 LPAP08519 4548 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 IGKV2-28A0A075B6P5 120 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 TMEM262E9PQX1 116 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 NDUFC2O95298 119 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 IGKV2D-28P01615 120 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 KRTAP11-1Q8IUC1 163 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 COX7B2Q8TF08 81 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 COPS9Q8WXC6 57 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 CLEC2BQ92478 149 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 FAT4Q6V0I7 4981 aa3.48□□□□□ -1.85
EPHA4-204ENST00000415749 TEX49A0A1B0GTD5 131 aa3.47□□□□□ -1.85
EPHA4-204ENST00000415749 LINC00959A0A1B0GUT2 108 aa3.47□□□□□ -1.85
EPHA4-204ENST00000415749 TRACP01848 142 aa3.47□□□□□ -1.85
EPHA4-204ENST00000415749 COX6CP09669 75 aa3.47□□□□□ -1.85
EPHA4-204ENST00000415749 RPL28P46779 137 aaKnown RBP3.47□□□□□ -1.85
EPHA4-204ENST00000415749 C2orf82Q6UX34 121 aa3.47□□□□□ -1.85
EPHA4-204ENST00000415749 DPH3Q96FX2 82 aa3.47□□□□□ -1.85
EPHA4-204ENST00000415749 MUC2Q02817 5179 aa3.46□□□□□ -1.85
EPHA4-204ENST00000415749 FAM229BQ4G0N7 80 aa3.46□□□□□ -1.86
EPHA4-204ENST00000415749 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
EPHA4-204ENST00000415749 Q6Q795 121 aa3.46□□□□□ -1.86
EPHA4-204ENST00000415749 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
EPHA4-204ENST00000415749 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
EPHA4-204ENST00000415749 Q8IZM0 81 aa3.45□□□□□ -1.86
EPHA4-204ENST00000415749 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
EPHA4-204ENST00000415749 FSIP2Q5CZC0 6907 aa3.44□□□□□ -1.86
EPHA4-204ENST00000415749 TRAV13-2A0A0B4J235 113 aa3.44□□□□□ -1.86
EPHA4-204ENST00000415749 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
EPHA4-204ENST00000415749 CKS1BP61024 79 aa3.44□□□□□ -1.86
EPHA4-204ENST00000415749 C9orf163Q8N9P6 203 aa3.44□□□□□ -1.86
EPHA4-204ENST00000415749 OBSCN-AS1Q96MR7 158 aa3.44□□□□□ -1.86
EPHA4-204ENST00000415749 SS18Q15532 418 aa3.43□□□□□ -1.86
EPHA4-204ENST00000415749 C5orf38Q86SI9 138 aa3.43□□□□□ -1.86
EPHA4-204ENST00000415749 SMIM11BQ8TCY0 68 aa3.43□□□□□ -1.86
EPHA4-204ENST00000415749 LINC00167Q96N53 147 aa3.43□□□□□ -1.86
EPHA4-204ENST00000415749 IGKV3OR2-268A0A0C4DH90 116 aa3.42□□□□□ -1.86
EPHA4-204ENST00000415749 TRBV7-7A0A0K0K1E9 115 aa3.42□□□□□ -1.86
EPHA4-204ENST00000415749 CRPP02741 224 aa3.42□□□□□ -1.86
EPHA4-204ENST00000415749 BAALC-AS2P0C853 105 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms