RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 LINC01547P58512 204 aaPredicted RBP8.39□□□□□ -1.07
CHD1-202ENST00000414220 CD164Q04900 197 aa8.39□□□□□ -1.07
CHD1-202ENST00000414220 Q8N377 158 aa8.39□□□□□ -1.07
CHD1-202ENST00000414220 OCIAD2Q56VL3 154 aa8.38□□□□□ -1.07
CHD1-202ENST00000414220 PPDPFLQ8WWR9 84 aa8.38□□□□□ -1.07
CHD1-202ENST00000414220 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
CHD1-202ENST00000414220 LRP2P98164 4655 aa8.38□□□□□ -1.07
CHD1-202ENST00000414220 FXYD2P54710 66 aa8.37□□□□□ -1.07
CHD1-202ENST00000414220 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
CHD1-202ENST00000414220 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
CHD1-202ENST00000414220 HRCT1Q6UXD1 115 aa8.36□□□□□ -1.07
CHD1-202ENST00000414220 SNHG12Q9BXW3 62 aa8.36□□□□□ -1.07
CHD1-202ENST00000414220 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
CHD1-202ENST00000414220 A0A1B0GX51 115 aa8.34□□□□□ -1.07
CHD1-202ENST00000414220 COX6CP09669 75 aa8.34□□□□□ -1.07
CHD1-202ENST00000414220 PSMB2P49721 201 aa8.34□□□□□ -1.07
CHD1-202ENST00000414220 Q6JHZ5 121 aa8.33□□□□□ -1.08
CHD1-202ENST00000414220 SMIM6P0DI80 62 aa8.31□□□□□ -1.08
CHD1-202ENST00000414220 DNAL4O96015 105 aa8.29□□□□□ -1.08
CHD1-202ENST00000414220 LPAP08519 4548 aa8.28□□□□□ -1.08
CHD1-202ENST00000414220 H3BQ85 93 aa8.28□□□□□ -1.08
CHD1-202ENST00000414220 TRIAP1O43715 76 aa8.28□□□□□ -1.08
CHD1-202ENST00000414220 TCL1BO95988 128 aa8.28□□□□□ -1.08
CHD1-202ENST00000414220 IGLV8-61A0A075B6I0 122 aa8.27□□□□□ -1.09
CHD1-202ENST00000414220 Q5XG85 94 aa8.27□□□□□ -1.09
CHD1-202ENST00000414220 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
CHD1-202ENST00000414220 K7ERJ3 54 aa8.26□□□□□ -1.09
CHD1-202ENST00000414220 M0R143 59 aa8.26□□□□□ -1.09
CHD1-202ENST00000414220 FAM218AQ96MZ4 157 aa8.26□□□□□ -1.09
CHD1-202ENST00000414220 SCGB1C2P0DMR2 95 aa8.25□□□□□ -1.09
CHD1-202ENST00000414220 TSTD3H0UI37 97 aa8.24□□□□□ -1.09
CHD1-202ENST00000414220 LCE2BO14633 110 aa8.24□□□□□ -1.09
CHD1-202ENST00000414220 FABP2P12104 132 aa8.24□□□□□ -1.09
CHD1-202ENST00000414220 KRTAP13-3Q3SY46 172 aa8.24□□□□□ -1.09
CHD1-202ENST00000414220 NDUFV3P56181 108 aaKnown RBP8.23□□□□□ -1.09
CHD1-202ENST00000414220 IGFL1Q6UW32 110 aa8.23□□□□□ -1.09
CHD1-202ENST00000414220 A0A0G2JQZ4 141 aa8.22□□□□□ -1.09
CHD1-202ENST00000414220 ORMDL1Q9P0S3 153 aa8.22□□□□□ -1.09
CHD1-202ENST00000414220 H3BMG7 143 aa8.2□□□□□ -1.1
CHD1-202ENST00000414220 TMEM256-PLSCR3K7ERE1 68 aa8.2□□□□□ -1.1
CHD1-202ENST00000414220 TRBV7-7A0A0K0K1E9 115 aa8.19□□□□□ -1.1
CHD1-202ENST00000414220 H3BUT2 72 aa8.19□□□□□ -1.1
CHD1-202ENST00000414220 A0A0U1RQV1 116 aa8.17□□□□□ -1.1
CHD1-202ENST00000414220 TRACP01848 142 aa8.17□□□□□ -1.1
CHD1-202ENST00000414220 SEC61BP60468 96 aaKnown RBP8.17□□□□□ -1.1
CHD1-202ENST00000414220 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
CHD1-202ENST00000414220 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
CHD1-202ENST00000414220 SS18L2Q9UHA2 77 aa8.17□□□□□ -1.1
CHD1-202ENST00000414220 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
CHD1-202ENST00000414220 Q6Q795 121 aa8.15□□□□□ -1.1
CHD1-202ENST00000414220 LOC105371267A0A1B0GV96 52 aa8.14□□□□□ -1.11
CHD1-202ENST00000414220 LST1O00453 97 aa8.13□□□□□ -1.11
CHD1-202ENST00000414220 ANKRD29Q8N6D5 301 aa8.13□□□□□ -1.11
CHD1-202ENST00000414220 UBE2V1Q13404 147 aa8.12□□□□□ -1.11
CHD1-202ENST00000414220 LYRM7Q5U5X0 104 aa8.12□□□□□ -1.11
CHD1-202ENST00000414220 RNF213Q63HN8 5207 aa8.12□□□□□ -1.11
CHD1-202ENST00000414220 C9orf92A6NGG3 77 aa8.11□□□□□ -1.11
CHD1-202ENST00000414220 XP32Q5T750 250 aa8.11□□□□□ -1.11
CHD1-202ENST00000414220 ATXN8Q156A1 80 aa8.1□□□□□ -1.11
CHD1-202ENST00000414220 BATFQ16520 125 aa8.09□□□□□ -1.11
CHD1-202ENST00000414220 A0A087WSZ3 146 aa8.07□□□□□ -1.12
CHD1-202ENST00000414220 A0A1B0GV72 72 aa8.06□□□□□ -1.12
CHD1-202ENST00000414220 BAALC-AS2P0C853 105 aa8.06□□□□□ -1.12
CHD1-202ENST00000414220 RBM3P98179 157 aaKnown RBP8.06□□□□□ -1.12
CHD1-202ENST00000414220 DSCR8Q96T75 97 aa8.06□□□□□ -1.12
CHD1-202ENST00000414220 TRBV7-4A0A0J9YYF1 115 aa8.05□□□□□ -1.12
CHD1-202ENST00000414220 TRBV20-1A0A075B6N2 111 aa8.04□□□□□ -1.12
CHD1-202ENST00000414220 A0A1W2PNM2 257 aa8.03□□□□□ -1.12
CHD1-202ENST00000414220 CCKP06307 115 aa8.03□□□□□ -1.12
CHD1-202ENST00000414220 NAA38Q9BRA0 125 aaKnown RBP8.03□□□□□ -1.12
CHD1-202ENST00000414220 C21orf62-AS1Q17RA5 79 aa8.02□□□□□ -1.13
CHD1-202ENST00000414220 JMJD7-PLA2G4BH0Y9G9 81 aa8.01□□□□□ -1.13
CHD1-202ENST00000414220 C9JAW5 83 aa8□□□□□ -1.13
CHD1-202ENST00000414220 VPS25Q9BRG1 176 aa8□□□□□ -1.13
CHD1-202ENST00000414220 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
CHD1-202ENST00000414220 C9orf118A6NHY6 69 aa7.97□□□□□ -1.13
CHD1-202ENST00000414220 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.14
CHD1-202ENST00000414220 PCOTHQ58A44 107 aa7.96□□□□□ -1.14
CHD1-202ENST00000414220 PDE6GP18545 87 aa7.95□□□□□ -1.14
CHD1-202ENST00000414220 OBSCN-AS1Q96MR7 158 aa7.95□□□□□ -1.14
CHD1-202ENST00000414220 SIGMAR1Q99720 223 aa7.95□□□□□ -1.14
CHD1-202ENST00000414220 MUC2Q02817 5179 aa7.94□□□□□ -1.14
CHD1-202ENST00000414220 IGKV4-1P06312 121 aa7.94□□□□□ -1.14
CHD1-202ENST00000414220 Q96NJ1 140 aa7.93□□□□□ -1.14
CHD1-202ENST00000414220 A0A1B0GW54 56 aa7.92□□□□□ -1.14
CHD1-202ENST00000414220 A0A1W2PPM0 123 aa7.92□□□□□ -1.14
CHD1-202ENST00000414220 TAX1BP3O14907 124 aa7.92□□□□□ -1.14
CHD1-202ENST00000414220 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
CHD1-202ENST00000414220 Q75L30 129 aa7.89□□□□□ -1.15
CHD1-202ENST00000414220 LOC110117498A0A087WWA1 95 aa7.88□□□□□ -1.15
CHD1-202ENST00000414220 H3BT86 120 aa7.88□□□□□ -1.15
CHD1-202ENST00000414220 LINC00313P59037 77 aa7.88□□□□□ -1.15
CHD1-202ENST00000414220 COL5A1-AS1Q5SY13 56 aa7.88□□□□□ -1.15
CHD1-202ENST00000414220 LINC00472Q9H8W2 130 aa7.88□□□□□ -1.15
CHD1-202ENST00000414220 J3KT08 172 aa7.87□□□□□ -1.15
CHD1-202ENST00000414220 Q6ZQT0 140 aa7.87□□□□□ -1.15
CHD1-202ENST00000414220 DEFB116Q30KQ4 102 aa7.86□□□□□ -1.15
CHD1-202ENST00000414220 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
CHD1-202ENST00000414220 C14orf132Q9NPU4 83 aa7.85□□□□□ -1.15
CHD1-202ENST00000414220 SPCS1Q9Y6A9 102 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms