RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TRIAP1O43715 76 aa12.75□□□□□ -0.37
PTCD3-203ENST00000409783 RPS29P62273 56 aaKnown RBP12.74□□□□□ -0.37
PTCD3-203ENST00000409783 UBR4Q5T4S7 5183 aa12.74□□□□□ -0.37
PTCD3-203ENST00000409783 PPDPFLQ8WWR9 84 aa12.68□□□□□ -0.38
PTCD3-203ENST00000409783 A0A1B0GX51 115 aa12.67□□□□□ -0.38
PTCD3-203ENST00000409783 A0A0G2JQZ4 141 aa12.66□□□□□ -0.38
PTCD3-203ENST00000409783 CD164Q04900 197 aa12.65□□□□□ -0.38
PTCD3-203ENST00000409783 CLEC2BQ92478 149 aa12.65□□□□□ -0.38
PTCD3-203ENST00000409783 IGLV8-61A0A075B6I0 122 aa12.64□□□□□ -0.39
PTCD3-203ENST00000409783 TSTD3H0UI37 97 aa12.64□□□□□ -0.39
PTCD3-203ENST00000409783 PSMB2P49721 201 aa12.64□□□□□ -0.39
PTCD3-203ENST00000409783 HRCT1Q6UXD1 115 aa12.64□□□□□ -0.39
PTCD3-203ENST00000409783 M0R143 59 aa12.63□□□□□ -0.39
PTCD3-203ENST00000409783 SNCGO76070 127 aa12.63□□□□□ -0.39
PTCD3-203ENST00000409783 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
PTCD3-203ENST00000409783 IGLV7-46A0A075B6I9 117 aa12.62□□□□□ -0.39
PTCD3-203ENST00000409783 FP248Q71RG6 208 aaPredicted RBP12.62□□□□□ -0.39
PTCD3-203ENST00000409783 F8WEM9 126 aa12.61□□□□□ -0.39
PTCD3-203ENST00000409783 COX6CP09669 75 aa12.59□□□□□ -0.39
PTCD3-203ENST00000409783 SNHG12Q9BXW3 62 aa12.59□□□□□ -0.39
PTCD3-203ENST00000409783 TPRXLQ17RH7 258 aa12.57□□□□□ -0.4
PTCD3-203ENST00000409783 Q6JHZ5 121 aa12.56□□□□□ -0.4
PTCD3-203ENST00000409783 IGFL1Q6UW32 110 aa12.56□□□□□ -0.4
PTCD3-203ENST00000409783 LIMD2Q9BT23 127 aa12.56□□□□□ -0.4
PTCD3-203ENST00000409783 Q5XG85 94 aa12.55□□□□□ -0.4
PTCD3-203ENST00000409783 NDUFV3P56181 108 aaKnown RBP12.53□□□□□ -0.4
PTCD3-203ENST00000409783 H3BUT2 72 aa12.52□□□□□ -0.41
PTCD3-203ENST00000409783 LST1O00453 97 aa12.5□□□□□ -0.41
PTCD3-203ENST00000409783 DNAL4O96015 105 aa12.5□□□□□ -0.41
PTCD3-203ENST00000409783 GHRHP01286 108 aa12.5□□□□□ -0.41
PTCD3-203ENST00000409783 TRACP01848 142 aa12.49□□□□□ -0.41
PTCD3-203ENST00000409783 SCGB1C2P0DMR2 95 aa12.49□□□□□ -0.41
PTCD3-203ENST00000409783 FABP2P12104 132 aa12.49□□□□□ -0.41
PTCD3-203ENST00000409783 KRTAP13-3Q3SY46 172 aa12.49□□□□□ -0.41
PTCD3-203ENST00000409783 ORMDL1Q9P0S3 153 aa12.49□□□□□ -0.41
PTCD3-203ENST00000409783 NAA38Q9BRA0 125 aaKnown RBP12.48□□□□□ -0.41
PTCD3-203ENST00000409783 TRBV7-7A0A0K0K1E9 115 aa12.44□□□□□ -0.42
PTCD3-203ENST00000409783 H3BMG7 143 aa12.44□□□□□ -0.42
PTCD3-203ENST00000409783 H3BQ85 93 aa12.44□□□□□ -0.42
PTCD3-203ENST00000409783 BATFQ16520 125 aa12.44□□□□□ -0.42
PTCD3-203ENST00000409783 RNF213Q63HN8 5207 aa12.43□□□□□ -0.42
PTCD3-203ENST00000409783 C1orf195Q5TG92 126 aa12.43□□□□□ -0.42
PTCD3-203ENST00000409783 CDIP1Q9H305 208 aa12.43□□□□□ -0.42
PTCD3-203ENST00000409783 TMEM256-PLSCR3K7ERE1 68 aa12.41□□□□□ -0.42
PTCD3-203ENST00000409783 TCL1BO95988 128 aa12.4□□□□□ -0.42
PTCD3-203ENST00000409783 Q6Q795 121 aa12.4□□□□□ -0.42
PTCD3-203ENST00000409783 ASB16-AS1Q495Z4 193 aa12.38□□□□□ -0.43
PTCD3-203ENST00000409783 MUC17Q685J3 4493 aa12.38□□□□□ -0.43
PTCD3-203ENST00000409783 UBE2V1Q13404 147 aa12.37□□□□□ -0.43
PTCD3-203ENST00000409783 TEN1Q86WV5 123 aa12.36□□□□□ -0.43
PTCD3-203ENST00000409783 ATXN8Q156A1 80 aa12.35□□□□□ -0.43
PTCD3-203ENST00000409783 TAX1BP3O14907 124 aa12.34□□□□□ -0.43
PTCD3-203ENST00000409783 A0A1W2PNM2 257 aa12.33□□□□□ -0.44
PTCD3-203ENST00000409783 BAALC-AS2P0C853 105 aa12.32□□□□□ -0.44
PTCD3-203ENST00000409783 A0A1B0GV72 72 aa12.31□□□□□ -0.44
PTCD3-203ENST00000409783 C9orf118A6NHY6 69 aa12.31□□□□□ -0.44
PTCD3-203ENST00000409783 LYRM7Q5U5X0 104 aa12.29□□□□□ -0.44
PTCD3-203ENST00000409783 ANKRD29Q8N6D5 301 aa12.29□□□□□ -0.44
PTCD3-203ENST00000409783 XP32Q5T750 250 aa12.27□□□□□ -0.45
PTCD3-203ENST00000409783 TRBV20-1A0A075B6N2 111 aa12.26□□□□□ -0.45
PTCD3-203ENST00000409783 A0A087WSZ3 146 aa12.26□□□□□ -0.45
PTCD3-203ENST00000409783 TRBV7-4A0A0J9YYF1 115 aa12.26□□□□□ -0.45
PTCD3-203ENST00000409783 C9orf92A6NGG3 77 aa12.24□□□□□ -0.45
PTCD3-203ENST00000409783 SS18L2Q9UHA2 77 aa12.24□□□□□ -0.45
PTCD3-203ENST00000409783 A0A1W2PPM0 123 aa12.23□□□□□ -0.45
PTCD3-203ENST00000409783 RBM3P98179 157 aaKnown RBP12.22□□□□□ -0.45
PTCD3-203ENST00000409783 Q96NJ1 140 aa12.2□□□□□ -0.46
PTCD3-203ENST00000409783 MUC2Q02817 5179 aa12.2□□□□□ -0.46
PTCD3-203ENST00000409783 CCKP06307 115 aa12.19□□□□□ -0.46
PTCD3-203ENST00000409783 C9JAW5 83 aa12.18□□□□□ -0.46
PTCD3-203ENST00000409783 DSCR8Q96T75 97 aa12.16□□□□□ -0.46
PTCD3-203ENST00000409783 COL5A1-AS1Q5SY13 56 aa12.15□□□□□ -0.46
PTCD3-203ENST00000409783 JMJD7-PLA2G4BH0Y9G9 81 aa12.13□□□□□ -0.47
PTCD3-203ENST00000409783 SEC61BP60468 96 aaKnown RBP12.12□□□□□ -0.47
PTCD3-203ENST00000409783 PCP4L1A6NKN8 68 aa12.11□□□□□ -0.47
PTCD3-203ENST00000409783 OBSCN-AS1Q96MR7 158 aa12.11□□□□□ -0.47
PTCD3-203ENST00000409783 VPS25Q9BRG1 176 aa12.09□□□□□ -0.47
PTCD3-203ENST00000409783 LOC110117498A0A087WWA1 95 aa12.08□□□□□ -0.48
PTCD3-203ENST00000409783 H3BT86 120 aa12.08□□□□□ -0.48
PTCD3-203ENST00000409783 Q6ZQT0 140 aa12.08□□□□□ -0.48
PTCD3-203ENST00000409783 SPCS1Q9Y6A9 102 aa12.08□□□□□ -0.48
PTCD3-203ENST00000409783 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
PTCD3-203ENST00000409783 KRTAP4-1Q9BYQ7 146 aa12.07□□□□□ -0.48
PTCD3-203ENST00000409783 LINC00472Q9H8W2 130 aa12.07□□□□□ -0.48
PTCD3-203ENST00000409783 C14orf132Q9NPU4 83 aa12.04□□□□□ -0.48
PTCD3-203ENST00000409783 PDE6GP18545 87 aa12.02□□□□□ -0.49
PTCD3-203ENST00000409783 RPL37P61927 97 aaKnown RBP12.02□□□□□ -0.49
PTCD3-203ENST00000409783 IGKV4-1P06312 121 aa12□□□□□ -0.49
PTCD3-203ENST00000409783 PCOTHQ58A44 107 aa12□□□□□ -0.49
PTCD3-203ENST00000409783 DEFB116Q30KQ4 102 aa11.99□□□□□ -0.49
PTCD3-203ENST00000409783 SIGMAR1Q99720 223 aa11.99□□□□□ -0.49
PTCD3-203ENST00000409783 SMCPP49901 116 aaPredicted RBP11.98□□□□□ -0.49
PTCD3-203ENST00000409783 C21orf62-AS1Q17RA5 79 aa11.98□□□□□ -0.49
PTCD3-203ENST00000409783 A0A1B0GW54 56 aa11.97□□□□□ -0.49
PTCD3-203ENST00000409783 K7EP34 96 aa11.96□□□□□ -0.49
PTCD3-203ENST00000409783 PRO0461Q9UI25 63 aa11.95□□□□□ -0.5
PTCD3-203ENST00000409783 DSCR10P59022 87 aa11.92□□□□□ -0.5
PTCD3-203ENST00000409783 FAT4Q6V0I7 4981 aa11.92□□□□□ -0.5
PTCD3-203ENST00000409783 Q75L30 129 aa11.91□□□□□ -0.5
PTCD3-203ENST00000409783 A0A0U1RQV1 116 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms