RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 LCE6AA0A183 80 aa10.54□□□□□ -0.72
PCDHA13-202ENST00000409494 COA5Q86WW8 74 aa10.52□□□□□ -0.72
PCDHA13-202ENST00000409494 ANAPC11Q9NYG5 84 aa10.51□□□□□ -0.73
PCDHA13-202ENST00000409494 Q8NDZ9 215 aa10.49□□□□□ -0.73
PCDHA13-202ENST00000409494 OCR1Q9BZK8 76 aa10.49□□□□□ -0.73
PCDHA13-202ENST00000409494 CYP4F30PQ9H0H9 118 aa10.48□□□□□ -0.73
PCDHA13-202ENST00000409494 COX6B2Q6YFQ2 88 aa10.48□□□□□ -0.73
PCDHA13-202ENST00000409494 SPRR1BP22528 89 aa10.47□□□□□ -0.73
PCDHA13-202ENST00000409494 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
PCDHA13-202ENST00000409494 KRTAP26-1Q6PEX3 210 aa10.45□□□□□ -0.74
PCDHA13-202ENST00000409494 RBM12B-AS1Q9P1G2 102 aa10.45□□□□□ -0.74
PCDHA13-202ENST00000409494 C9orf92A6NGG3 77 aa10.41□□□□□ -0.74
PCDHA13-202ENST00000409494 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
PCDHA13-202ENST00000409494 KRTAP1-5Q9BYS1 174 aa10.39□□□□□ -0.75
PCDHA13-202ENST00000409494 IGLV8-61A0A075B6I0 122 aa10.39□□□□□ -0.75
PCDHA13-202ENST00000409494 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
PCDHA13-202ENST00000409494 CYSTM1Q9H1C7 97 aa10.38□□□□□ -0.75
PCDHA13-202ENST00000409494 KALRNO60229 2985 aa10.37□□□□□ -0.75
PCDHA13-202ENST00000409494 Q6ZR54 194 aa10.36□□□□□ -0.75
PCDHA13-202ENST00000409494 KMT2BQ9UMN6 2715 aaPredicted RBP10.36□□□□□ -0.75
PCDHA13-202ENST00000409494 FRYLO94915 3013 aa10.36□□□□□ -0.75
PCDHA13-202ENST00000409494 PRR26Q8N8Z3 221 aa10.35□□□□□ -0.75
PCDHA13-202ENST00000409494 FREM2Q5SZK8 3169 aa10.35□□□□□ -0.75
PCDHA13-202ENST00000409494 IGLV7-46A0A075B6I9 117 aa10.35□□□□□ -0.75
PCDHA13-202ENST00000409494 ADGRG4Q8IZF6 3080 aa10.34□□□□□ -0.75
PCDHA13-202ENST00000409494 NBEAL2Q6ZNJ1 2754 aa10.31□□□□□ -0.76
PCDHA13-202ENST00000409494 BOD1L1Q8NFC6 3051 aa10.31□□□□□ -0.76
PCDHA13-202ENST00000409494 ITPR2Q14571 2701 aa10.3□□□□□ -0.76
PCDHA13-202ENST00000409494 NSD1Q96L73 2696 aaPredicted RBP10.28□□□□□ -0.76
PCDHA13-202ENST00000409494 UBR5O95071 2799 aaPredicted RBP10.28□□□□□ -0.76
PCDHA13-202ENST00000409494 UQCR11O14957 56 aa10.27□□□□□ -0.77
PCDHA13-202ENST00000409494 ATMQ13315 3056 aa10.26□□□□□ -0.77
PCDHA13-202ENST00000409494 FLNCQ14315 2725 aa10.26□□□□□ -0.77
PCDHA13-202ENST00000409494 Q6ZSA8 131 aa10.26□□□□□ -0.77
PCDHA13-202ENST00000409494 Q1T7F1 81 aa10.25□□□□□ -0.77
PCDHA13-202ENST00000409494 NBEAL1Q6ZS30 2694 aa10.25□□□□□ -0.77
PCDHA13-202ENST00000409494 Q5XG85 94 aa10.24□□□□□ -0.77
PCDHA13-202ENST00000409494 KRTAP10-1P60331 282 aa10.22□□□□□ -0.77
PCDHA13-202ENST00000409494 LRBAP50851 2863 aa10.2□□□□□ -0.78
PCDHA13-202ENST00000409494 LINC00483Q53H64 154 aa10.18□□□□□ -0.78
PCDHA13-202ENST00000409494 FP248Q71RG6 208 aaPredicted RBP10.18□□□□□ -0.78
PCDHA13-202ENST00000409494 COL6A3P12111 3177 aa10.18□□□□□ -0.78
PCDHA13-202ENST00000409494 Q5VSD8 79 aa10.18□□□□□ -0.78
PCDHA13-202ENST00000409494 KRTAP10-2P60368 255 aa10.17□□□□□ -0.78
PCDHA13-202ENST00000409494 SPEGQ15772 3267 aa10.16□□□□□ -0.78
PCDHA13-202ENST00000409494 LINC00472Q9H8W2 130 aa10.15□□□□□ -0.78
PCDHA13-202ENST00000409494 MIR22HGQ0VDD5 57 aa10.15□□□□□ -0.79
PCDHA13-202ENST00000409494 DMXL2Q8TDJ6 3036 aa10.14□□□□□ -0.79
PCDHA13-202ENST00000409494 MMP24-AS1A0A0U1RRL7 71 aa10.13□□□□□ -0.79
PCDHA13-202ENST00000409494 ITPR1Q14643 2758 aa10.13□□□□□ -0.79
PCDHA13-202ENST00000409494 ZCCHC13Q8WW36 166 aaKnown RBP10.13□□□□□ -0.79
PCDHA13-202ENST00000409494 KTN1-AS1Q86SY8 53 aa10.12□□□□□ -0.79
PCDHA13-202ENST00000409494 COL12A1Q99715 3063 aa10.12□□□□□ -0.79
PCDHA13-202ENST00000409494 TACC2O95359 2948 aa10.12□□□□□ -0.79
PCDHA13-202ENST00000409494 CDC42SE1Q9NRR8 79 aa10.12□□□□□ -0.79
PCDHA13-202ENST00000409494 KRTAP4-16G5E9R7 235 aaPredicted RBP10.11□□□□□ -0.79
PCDHA13-202ENST00000409494 OXTP01178 125 aa10.11□□□□□ -0.79
PCDHA13-202ENST00000409494 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
PCDHA13-202ENST00000409494 REV3LO60673 3130 aa10.11□□□□□ -0.79
PCDHA13-202ENST00000409494 HIVEP1P15822 2718 aa10.1□□□□□ -0.79
PCDHA13-202ENST00000409494 Q6ZRN7 208 aaPredicted RBP10.08□□□□□ -0.8
PCDHA13-202ENST00000409494 SPTBN5Q9NRC6 3674 aaKnown RBP10.04□□□□□ -0.8
PCDHA13-202ENST00000409494 Q8N9P0 234 aaPredicted RBP10.04□□□□□ -0.8
PCDHA13-202ENST00000409494 Q8N1X5 172 aa10.04□□□□□ -0.8
PCDHA13-202ENST00000409494 Q75L30 129 aa10.01□□□□□ -0.81
PCDHA13-202ENST00000409494 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
PCDHA13-202ENST00000409494 TNRC18O15417 2968 aaPredicted RBP10□□□□□ -0.81
PCDHA13-202ENST00000409494 HRES1P13985 223 aa9.99□□□□□ -0.81
PCDHA13-202ENST00000409494 LCA10Q71F78 164 aa9.97□□□□□ -0.81
PCDHA13-202ENST00000409494 EYSQ5T1H1 3165 aa9.96□□□□□ -0.81
PCDHA13-202ENST00000409494 PANO1I0J062 215 aa9.96□□□□□ -0.81
PCDHA13-202ENST00000409494 LINC01558Q9Y6Z2 57 aa9.96□□□□□ -0.81
PCDHA13-202ENST00000409494 UTP20O75691 2785 aaKnown RBP9.96□□□□□ -0.81
PCDHA13-202ENST00000409494 APCP25054 2843 aa9.96□□□□□ -0.82
PCDHA13-202ENST00000409494 ZZEF1O43149 2961 aa9.96□□□□□ -0.82
PCDHA13-202ENST00000409494 CFAP47Q6ZTR5 3102 aa9.95□□□□□ -0.82
PCDHA13-202ENST00000409494 ASB16-AS1Q495Z4 193 aa9.95□□□□□ -0.82
PCDHA13-202ENST00000409494 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
PCDHA13-202ENST00000409494 STAB2Q8WWQ8 2551 aa9.92□□□□□ -0.82
PCDHA13-202ENST00000409494 Q5VV11 94 aa9.91□□□□□ -0.82
PCDHA13-202ENST00000409494 Q5W150 140 aa9.91□□□□□ -0.82
PCDHA13-202ENST00000409494 ASH1LQ9NR48 2969 aaKnown RBP9.9□□□□□ -0.82
PCDHA13-202ENST00000409494 SPINK7P58062 85 aa9.9□□□□□ -0.82
PCDHA13-202ENST00000409494 CRIPTQ9P021 101 aa9.89□□□□□ -0.83
PCDHA13-202ENST00000409494 LOC400499M0QZD8 3231 aa9.88□□□□□ -0.83
PCDHA13-202ENST00000409494 ZANQ9Y493 2812 aa9.87□□□□□ -0.83
PCDHA13-202ENST00000409494 DMXL1Q9Y485 3027 aa9.86□□□□□ -0.83
PCDHA13-202ENST00000409494 NIPBLQ6KC79 2804 aaeCLIP9.86□□□□□ -0.83
PCDHA13-202ENST00000409494 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
PCDHA13-202ENST00000409494 HRNRQ86YZ3 2850 aaPredicted RBP9.85□□□□□ -0.83
PCDHA13-202ENST00000409494 USP34Q70CQ2 3546 aa9.84□□□□□ -0.83
PCDHA13-202ENST00000409494 M0R2T5 61 aa9.83□□□□□ -0.84
PCDHA13-202ENST00000409494 S4R3F8 94 aa9.82□□□□□ -0.84
PCDHA13-202ENST00000409494 A0A087X002 238 aa9.8□□□□□ -0.84
PCDHA13-202ENST00000409494 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
PCDHA13-202ENST00000409494 TENM4Q6N022 2769 aa9.79□□□□□ -0.84
PCDHA13-202ENST00000409494 A0A1B0GU33 70 aa9.79□□□□□ -0.84
PCDHA13-202ENST00000409494 KRTAP13-1Q8IUC0 172 aa9.77□□□□□ -0.85
PCDHA13-202ENST00000409494 LINC01554Q52M75 96 aa9.76□□□□□ -0.85
PCDHA13-202ENST00000409494 MYO15AQ9UKN7 3530 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms