RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 PRAC1Q96KF2 57 aa6.43□□□□□ -1.38
LTBP1-204ENST00000407925 OXTP01178 125 aa6.42□□□□□ -1.38
LTBP1-204ENST00000407925 LCE6AA0A183 80 aa6.42□□□□□ -1.38
LTBP1-204ENST00000407925 Q5VSD8 79 aa6.42□□□□□ -1.38
LTBP1-204ENST00000407925 FLNAP21333 2647 aaKnown RBP6.41□□□□□ -1.38
LTBP1-204ENST00000407925 M0QZ58 72 aa6.4□□□□□ -1.38
LTBP1-204ENST00000407925 PLAC4Q8WY50 150 aa6.4□□□□□ -1.39
LTBP1-204ENST00000407925 H3BS24 57 aa6.36□□□□□ -1.39
LTBP1-204ENST00000407925 KRTAP1-5Q9BYS1 174 aa6.36□□□□□ -1.39
LTBP1-204ENST00000407925 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
LTBP1-204ENST00000407925 RPS29P62273 56 aaKnown RBP6.35□□□□□ -1.39
LTBP1-204ENST00000407925 HELZ2Q9BYK8 2649 aaKnown RBP6.35□□□□□ -1.39
LTBP1-204ENST00000407925 KRTAP10-1P60331 282 aa6.35□□□□□ -1.39
LTBP1-204ENST00000407925 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
LTBP1-204ENST00000407925 CENPFP49454 3210 aa6.34□□□□□ -1.39
LTBP1-204ENST00000407925 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.4
LTBP1-204ENST00000407925 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
LTBP1-204ENST00000407925 PANO1I0J062 215 aa6.32□□□□□ -1.4
LTBP1-204ENST00000407925 BPTFQ12830 3046 aa6.3□□□□□ -1.4
LTBP1-204ENST00000407925 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
LTBP1-204ENST00000407925 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
LTBP1-204ENST00000407925 KRTAP10-2P60368 255 aa6.27□□□□□ -1.41
LTBP1-204ENST00000407925 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
LTBP1-204ENST00000407925 NBEAL1Q6ZS30 2694 aa6.23□□□□□ -1.41
LTBP1-204ENST00000407925 A0A087X002 238 aa6.18□□□□□ -1.42
LTBP1-204ENST00000407925 CFAP46Q8IYW2 2715 aa6.17□□□□□ -1.42
LTBP1-204ENST00000407925 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
LTBP1-204ENST00000407925 PRRC2CQ9Y520 2896 aaKnown RBP6.14□□□□□ -1.43
LTBP1-204ENST00000407925 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
LTBP1-204ENST00000407925 A8MUU9 505 aa6.13□□□□□ -1.43
LTBP1-204ENST00000407925 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
LTBP1-204ENST00000407925 EP400Q96L91 3159 aa6.11□□□□□ -1.43
LTBP1-204ENST00000407925 TEP1Q99973 2627 aaKnown RBP6.11□□□□□ -1.43
LTBP1-204ENST00000407925 AKAP13Q12802 2813 aa6.09□□□□□ -1.43
LTBP1-204ENST00000407925 A6NN06 94 aa6.09□□□□□ -1.43
LTBP1-204ENST00000407925 STAB2Q8WWQ8 2551 aa6.09□□□□□ -1.44
LTBP1-204ENST00000407925 Q6ZRN7 208 aaPredicted RBP6.08□□□□□ -1.44
LTBP1-204ENST00000407925 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
LTBP1-204ENST00000407925 UNC79Q9P2D8 2635 aa6.05□□□□□ -1.44
LTBP1-204ENST00000407925 TNP1P09430 55 aa6.05□□□□□ -1.44
LTBP1-204ENST00000407925 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
LTBP1-204ENST00000407925 NOTCH1P46531 2555 aa6.04□□□□□ -1.44
LTBP1-204ENST00000407925 TEX15Q9BXT5 2789 aa6.04□□□□□ -1.44
LTBP1-204ENST00000407925 CHD6Q8TD26 2715 aa6.04□□□□□ -1.44
LTBP1-204ENST00000407925 COL6A5A8TX70 2615 aa6.03□□□□□ -1.44
LTBP1-204ENST00000407925 SETXQ7Z333 2677 aaKnown RBP6.03□□□□□ -1.44
LTBP1-204ENST00000407925 CENPEQ02224 2701 aa6.02□□□□□ -1.45
LTBP1-204ENST00000407925 KRTAP13-2Q52LG2 175 aa6□□□□□ -1.45
LTBP1-204ENST00000407925 SRCAPQ6ZRS2 3230 aa6□□□□□ -1.45
LTBP1-204ENST00000407925 A8MU10 97 aa5.99□□□□□ -1.45
LTBP1-204ENST00000407925 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
LTBP1-204ENST00000407925 KRTAP11-1Q8IUC1 163 aa5.98□□□□□ -1.45
LTBP1-204ENST00000407925 KRTAP21-3Q3LHN1 58 aa5.96□□□□□ -1.45
LTBP1-204ENST00000407925 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
LTBP1-204ENST00000407925 GCN1Q92616 2671 aaKnown RBP5.94□□□□□ -1.46
LTBP1-204ENST00000407925 NSD1Q96L73 2696 aaPredicted RBP5.91□□□□□ -1.46
LTBP1-204ENST00000407925 NDUFAF8A1L188 74 aa5.9□□□□□ -1.46
LTBP1-204ENST00000407925 MAP1AP78559 2803 aaPredicted RBP5.88□□□□□ -1.47
LTBP1-204ENST00000407925 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
LTBP1-204ENST00000407925 ZNF292O60281 2723 aa5.82□□□□□ -1.48
LTBP1-204ENST00000407925 BAHCC1Q9P281 2608 aa5.76□□□□□ -1.49
LTBP1-204ENST00000407925 KMT2BQ9UMN6 2715 aaPredicted RBP5.75□□□□□ -1.49
LTBP1-204ENST00000407925 UBR5O95071 2799 aaPredicted RBP5.75□□□□□ -1.49
LTBP1-204ENST00000407925 XP32Q5T750 250 aa5.74□□□□□ -1.49
LTBP1-204ENST00000407925 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
LTBP1-204ENST00000407925 IGSF10Q6WRI0 2623 aa5.72□□□□□ -1.49
LTBP1-204ENST00000407925 NBEAL2Q6ZNJ1 2754 aa5.72□□□□□ -1.49
LTBP1-204ENST00000407925 TPRXLQ17RH7 258 aa5.72□□□□□ -1.49
LTBP1-204ENST00000407925 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
LTBP1-204ENST00000407925 ITPR2Q14571 2701 aa5.7□□□□□ -1.5
LTBP1-204ENST00000407925 KRTAP1-4P0C5Y4 121 aa5.7□□□□□ -1.5
LTBP1-204ENST00000407925 P0C880 135 aa5.69□□□□□ -1.5
LTBP1-204ENST00000407925 CEP350Q5VT06 3117 aa5.68□□□□□ -1.5
LTBP1-204ENST00000407925 H0YAA0 97 aa5.62□□□□□ -1.51
LTBP1-204ENST00000407925 C5orf42Q9H799 3197 aa5.6□□□□□ -1.51
LTBP1-204ENST00000407925 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
LTBP1-204ENST00000407925 MGAQ8IWI9 3026 aa5.56□□□□□ -1.52
LTBP1-204ENST00000407925 CHD7Q9P2D1 2997 aa5.55□□□□□ -1.52
LTBP1-204ENST00000407925 KRTAP13-3Q3SY46 172 aa5.54□□□□□ -1.52
LTBP1-204ENST00000407925 ITPR1Q14643 2758 aa5.54□□□□□ -1.52
LTBP1-204ENST00000407925 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
LTBP1-204ENST00000407925 CHD9Q3L8U1 2897 aa5.51□□□□□ -1.53
LTBP1-204ENST00000407925 GOLGB1Q14789 3259 aaKnown RBP5.51□□□□□ -1.53
LTBP1-204ENST00000407925 HIVEP1P15822 2718 aa5.5□□□□□ -1.53
LTBP1-204ENST00000407925 TENM4Q6N022 2769 aa5.48□□□□□ -1.53
LTBP1-204ENST00000407925 DNAH12Q6ZR08 3092 aa5.48□□□□□ -1.53
LTBP1-204ENST00000407925 APCP25054 2843 aa5.47□□□□□ -1.53
LTBP1-204ENST00000407925 NIPBLQ6KC79 2804 aaeCLIP5.47□□□□□ -1.53
LTBP1-204ENST00000407925 A0A0C4DFX4 3053 aa5.47□□□□□ -1.53
LTBP1-204ENST00000407925 DSPP15924 2871 aaKnown RBP5.44□□□□□ -1.54
LTBP1-204ENST00000407925 FRYQ5TBA9 3013 aa5.42□□□□□ -1.54
LTBP1-204ENST00000407925 TRANK1O15050 2925 aa5.4□□□□□ -1.54
LTBP1-204ENST00000407925 UTP20O75691 2785 aaKnown RBP5.4□□□□□ -1.55
LTBP1-204ENST00000407925 CFAP54Q96N23 3096 aa5.38□□□□□ -1.55
LTBP1-204ENST00000407925 KRTAP13-4Q3LI77 160 aa5.35□□□□□ -1.55
LTBP1-204ENST00000407925 UTRNP46939 3433 aa5.34□□□□□ -1.55
LTBP1-204ENST00000407925 TENM3Q9P273 2699 aa5.32□□□□□ -1.56
LTBP1-204ENST00000407925 FLNCQ14315 2725 aa5.31□□□□□ -1.56
LTBP1-204ENST00000407925 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
LTBP1-204ENST00000407925 TACC2O95359 2948 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms