RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 DHRS4-AS1Q9P1J3 65 aa5.48□□□□□ -1.53
VPS53-203ENST00000401468 ERC2-IT1O76042 136 aa5.47□□□□□ -1.53
VPS53-203ENST00000401468 TSPAN13O95857 204 aa5.47□□□□□ -1.53
VPS53-203ENST00000401468 C21orf62-AS1Q17RA5 79 aa5.47□□□□□ -1.53
VPS53-203ENST00000401468 PRR26Q8N8Z3 221 aa5.47□□□□□ -1.53
VPS53-203ENST00000401468 TRIAP1O43715 76 aa5.46□□□□□ -1.54
VPS53-203ENST00000401468 FAM229BQ4G0N7 80 aa5.46□□□□□ -1.54
VPS53-203ENST00000401468 LINC00483Q53H64 154 aa5.46□□□□□ -1.54
VPS53-203ENST00000401468 LINC00575Q6W349 94 aa5.46□□□□□ -1.54
VPS53-203ENST00000401468 SPRR4Q96PI1 79 aa5.46□□□□□ -1.54
VPS53-203ENST00000401468 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
VPS53-203ENST00000401468 H0YGX0 51 aa5.45□□□□□ -1.54
VPS53-203ENST00000401468 SPRR1BP22528 89 aa5.45□□□□□ -1.54
VPS53-203ENST00000401468 VAMP3Q15836 100 aa5.45□□□□□ -1.54
VPS53-203ENST00000401468 LPAP08519 4548 aa5.44□□□□□ -1.54
VPS53-203ENST00000401468 IGLV5-48A0A075B6I7 105 aa5.44□□□□□ -1.54
VPS53-203ENST00000401468 A0A1B0GX51 115 aa5.44□□□□□ -1.54
VPS53-203ENST00000401468 H7C2G1 150 aa5.44□□□□□ -1.54
VPS53-203ENST00000401468 SNHG12Q9BXW3 62 aa5.44□□□□□ -1.54
VPS53-203ENST00000401468 ZNF706Q9Y5V0 76 aaPredicted RBP5.44□□□□□ -1.54
VPS53-203ENST00000401468 LINC01547P58512 204 aaPredicted RBP5.43□□□□□ -1.54
VPS53-203ENST00000401468 FAM218AQ96MZ4 157 aa5.43□□□□□ -1.54
VPS53-203ENST00000401468 A0A087X002 238 aa5.42□□□□□ -1.54
VPS53-203ENST00000401468 hADV29S1A0JD25 119 aa5.42□□□□□ -1.54
VPS53-203ENST00000401468 Q1RN00 199 aa5.42□□□□□ -1.54
VPS53-203ENST00000401468 ST20-AS1Q8NBB2 130 aa5.42□□□□□ -1.54
VPS53-203ENST00000401468 TAX1BP3O14907 124 aa5.41□□□□□ -1.54
VPS53-203ENST00000401468 SLC25A20O43772 301 aa5.4□□□□□ -1.54
VPS53-203ENST00000401468 COX6CP09669 75 aa5.4□□□□□ -1.54
VPS53-203ENST00000401468 BATFQ16520 125 aa5.4□□□□□ -1.54
VPS53-203ENST00000401468 KRTAP13-2Q52LG2 175 aa5.4□□□□□ -1.54
VPS53-203ENST00000401468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.4□□□□□ -1.54
VPS53-203ENST00000401468 CRYGAP11844 174 aa5.39□□□□□ -1.55
VPS53-203ENST00000401468 PSMB2P49721 201 aa5.39□□□□□ -1.55
VPS53-203ENST00000401468 Q6ZQY7 126 aa5.39□□□□□ -1.55
VPS53-203ENST00000401468 PPDPFLQ8WWR9 84 aa5.39□□□□□ -1.55
VPS53-203ENST00000401468 ANAPC11Q9NYG5 84 aa5.39□□□□□ -1.55
VPS53-203ENST00000401468 TEX49A0A1B0GTD5 131 aa5.38□□□□□ -1.55
VPS53-203ENST00000401468 A0A1B0GV90 55 aa5.38□□□□□ -1.55
VPS53-203ENST00000401468 LST1O00453 97 aa5.38□□□□□ -1.55
VPS53-203ENST00000401468 OCIAD2Q56VL3 154 aa5.38□□□□□ -1.55
VPS53-203ENST00000401468 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
VPS53-203ENST00000401468 SMIM29Q86T20 159 aa5.38□□□□□ -1.55
VPS53-203ENST00000401468 Q8N377 158 aa5.38□□□□□ -1.55
VPS53-203ENST00000401468 CLEC2BQ92478 149 aa5.38□□□□□ -1.55
VPS53-203ENST00000401468 TRACP01848 142 aa5.37□□□□□ -1.55
VPS53-203ENST00000401468 COL5A1-AS1Q5SY13 56 aa5.37□□□□□ -1.55
VPS53-203ENST00000401468 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
VPS53-203ENST00000401468 SNCGO76070 127 aa5.36□□□□□ -1.55
VPS53-203ENST00000401468 A0A1W2PPM0 123 aa5.35□□□□□ -1.55
VPS53-203ENST00000401468 H3BUT2 72 aa5.35□□□□□ -1.55
VPS53-203ENST00000401468 LYRM7Q5U5X0 104 aa5.35□□□□□ -1.55
VPS53-203ENST00000401468 C3orf22Q8N5N4 141 aa5.35□□□□□ -1.55
VPS53-203ENST00000401468 NAA38Q9BRA0 125 aaKnown RBP5.35□□□□□ -1.55
VPS53-203ENST00000401468 IGLV8-61A0A075B6I0 122 aa5.34□□□□□ -1.55
VPS53-203ENST00000401468 TRBV20-1A0A075B6N2 111 aa5.34□□□□□ -1.55
VPS53-203ENST00000401468 H3BQ85 93 aa5.34□□□□□ -1.55
VPS53-203ENST00000401468 TCL1BO95988 128 aa5.34□□□□□ -1.55
VPS53-203ENST00000401468 SCGB1C2P0DMR2 95 aa5.34□□□□□ -1.55
VPS53-203ENST00000401468 PRR4Q16378 134 aa5.34□□□□□ -1.55
VPS53-203ENST00000401468 SSBP3-AS1Q7Z2R9 100 aa5.34□□□□□ -1.55
VPS53-203ENST00000401468 PCP4P48539 62 aa5.33□□□□□ -1.56
VPS53-203ENST00000401468 DEFB105AQ8NG35 78 aa5.33□□□□□ -1.56
VPS53-203ENST00000401468 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
VPS53-203ENST00000401468 LAMTOR3Q9UHA4 124 aa5.33□□□□□ -1.56
VPS53-203ENST00000401468 ATXN8Q156A1 80 aa5.32□□□□□ -1.56
VPS53-203ENST00000401468 Q8NBF4 154 aa5.32□□□□□ -1.56
VPS53-203ENST00000401468 ORMDL1Q9P0S3 153 aa5.32□□□□□ -1.56
VPS53-203ENST00000401468 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
VPS53-203ENST00000401468 TMEM256-PLSCR3K7ERE1 68 aa5.31□□□□□ -1.56
VPS53-203ENST00000401468 DNAL4O96015 105 aa5.31□□□□□ -1.56
VPS53-203ENST00000401468 MOBPQ13875 183 aa5.31□□□□□ -1.56
VPS53-203ENST00000401468 RETNLBQ9BQ08 111 aa5.31□□□□□ -1.56
VPS53-203ENST00000401468 IGLV9-49A0A0B4J1Y8 123 aa5.3□□□□□ -1.56
VPS53-203ENST00000401468 FABP2P12104 132 aa5.3□□□□□ -1.56
VPS53-203ENST00000401468 UBE2V1Q13404 147 aa5.3□□□□□ -1.56
VPS53-203ENST00000401468 NDUFV3P56181 108 aaKnown RBP5.29□□□□□ -1.56
VPS53-203ENST00000401468 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
VPS53-203ENST00000401468 SPAG11AQ6PDA7 123 aa5.29□□□□□ -1.56
VPS53-203ENST00000401468 LINC00304Q8N9R0 145 aa5.29□□□□□ -1.56
VPS53-203ENST00000401468 CD164Q04900 197 aa5.28□□□□□ -1.56
VPS53-203ENST00000401468 Q6JHZ5 121 aa5.28□□□□□ -1.56
VPS53-203ENST00000401468 BAALC-AS2P0C853 105 aa5.27□□□□□ -1.57
VPS53-203ENST00000401468 C9orf153Q5TBE3 101 aa5.27□□□□□ -1.57
VPS53-203ENST00000401468 SPCS1Q9Y6A9 102 aa5.27□□□□□ -1.57
VPS53-203ENST00000401468 F8WEM9 126 aa5.26□□□□□ -1.57
VPS53-203ENST00000401468 H3BMG7 143 aa5.26□□□□□ -1.57
VPS53-203ENST00000401468 K7EP34 96 aa5.26□□□□□ -1.57
VPS53-203ENST00000401468 SPINK1P00995 79 aa5.26□□□□□ -1.57
VPS53-203ENST00000401468 Q6Q795 121 aa5.26□□□□□ -1.57
VPS53-203ENST00000401468 H3BT86 120 aa5.25□□□□□ -1.57
VPS53-203ENST00000401468 Q5XG85 94 aa5.25□□□□□ -1.57
VPS53-203ENST00000401468 IGFL1Q6UW32 110 aa5.25□□□□□ -1.57
VPS53-203ENST00000401468 OBSCN-AS1Q96MR7 158 aa5.25□□□□□ -1.57
VPS53-203ENST00000401468 C9JAW5 83 aa5.24□□□□□ -1.57
VPS53-203ENST00000401468 K7ERU9 68 aa5.24□□□□□ -1.57
VPS53-203ENST00000401468 ANKRD29Q8N6D5 301 aa5.24□□□□□ -1.57
VPS53-203ENST00000401468 PRO0461Q9UI25 63 aa5.24□□□□□ -1.57
VPS53-203ENST00000401468 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
VPS53-203ENST00000401468 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms