RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CRIPTQ9P021 101 aa11.27□□□□□ -0.6
COL18A1-204ENST00000400337 RBM12B-AS1Q9P1G2 102 aa11.27□□□□□ -0.61
COL18A1-204ENST00000400337 SPRR1AP35321 89 aa11.26□□□□□ -0.61
COL18A1-204ENST00000400337 NOTCH1P46531 2555 aa11.25□□□□□ -0.61
COL18A1-204ENST00000400337 UNC79Q9P2D8 2635 aa11.24□□□□□ -0.61
COL18A1-204ENST00000400337 PLAC8Q9NZF1 115 aa11.24□□□□□ -0.61
COL18A1-204ENST00000400337 CDH23Q9H251 3354 aa11.24□□□□□ -0.61
COL18A1-204ENST00000400337 IGSF10Q6WRI0 2623 aa11.22□□□□□ -0.61
COL18A1-204ENST00000400337 KRTAP1-5Q9BYS1 174 aa11.21□□□□□ -0.61
COL18A1-204ENST00000400337 NBEAL1Q6ZS30 2694 aa11.2□□□□□ -0.62
COL18A1-204ENST00000400337 KTN1-AS1Q86SY8 53 aa11.19□□□□□ -0.62
COL18A1-204ENST00000400337 A0A0D9SG42 100 aa11.19□□□□□ -0.62
COL18A1-204ENST00000400337 FRYQ5TBA9 3013 aa11.19□□□□□ -0.62
COL18A1-204ENST00000400337 CDC42SE1Q9NRR8 79 aa11.18□□□□□ -0.62
COL18A1-204ENST00000400337 FAM229BQ4G0N7 80 aa11.18□□□□□ -0.62
COL18A1-204ENST00000400337 LINC01554Q52M75 96 aa11.17□□□□□ -0.62
COL18A1-204ENST00000400337 MMP24-AS1A0A0U1RRL7 71 aa11.15□□□□□ -0.62
COL18A1-204ENST00000400337 Q1T7F1 81 aa11.15□□□□□ -0.62
COL18A1-204ENST00000400337 KRTAP26-1Q6PEX3 210 aa11.15□□□□□ -0.62
COL18A1-204ENST00000400337 IGLV7-46A0A075B6I9 117 aa11.14□□□□□ -0.63
COL18A1-204ENST00000400337 NBEAL2Q6ZNJ1 2754 aa11.14□□□□□ -0.63
COL18A1-204ENST00000400337 HRES1P13985 223 aa11.13□□□□□ -0.63
COL18A1-204ENST00000400337 UBR5O95071 2799 aaPredicted RBP11.13□□□□□ -0.63
COL18A1-204ENST00000400337 LCA10Q71F78 164 aa11.11□□□□□ -0.63
COL18A1-204ENST00000400337 Q6ZSA8 131 aa11.1□□□□□ -0.63
COL18A1-204ENST00000400337 SPRR1BP22528 89 aa11.1□□□□□ -0.63
COL18A1-204ENST00000400337 CELSR3Q9NYQ7 3312 aa11.08□□□□□ -0.64
COL18A1-204ENST00000400337 LINC00472Q9H8W2 130 aa11.06□□□□□ -0.64
COL18A1-204ENST00000400337 Q8N9P0 234 aaPredicted RBP11.05□□□□□ -0.64
COL18A1-204ENST00000400337 CYSTM1Q9H1C7 97 aa11.03□□□□□ -0.64
COL18A1-204ENST00000400337 ZCCHC13Q8WW36 166 aaKnown RBP11.01□□□□□ -0.65
COL18A1-204ENST00000400337 FREM2Q5SZK8 3169 aa11□□□□□ -0.65
COL18A1-204ENST00000400337 SZT2Q5T011 3432 aa10.98□□□□□ -0.65
COL18A1-204ENST00000400337 A0A1B0GU33 70 aa10.97□□□□□ -0.65
COL18A1-204ENST00000400337 Q75L30 129 aa10.97□□□□□ -0.65
COL18A1-204ENST00000400337 BAHCC1Q9P281 2608 aa10.96□□□□□ -0.65
COL18A1-204ENST00000400337 LCE6AA0A183 80 aa10.95□□□□□ -0.66
COL18A1-204ENST00000400337 KRTAP10-2P60368 255 aa10.95□□□□□ -0.66
COL18A1-204ENST00000400337 KRTAP10-1P60331 282 aa10.94□□□□□ -0.66
COL18A1-204ENST00000400337 Q5W150 140 aa10.94□□□□□ -0.66
COL18A1-204ENST00000400337 VCANP13611 3396 aa10.94□□□□□ -0.66
COL18A1-204ENST00000400337 LAMA1P25391 3075 aa10.93□□□□□ -0.66
COL18A1-204ENST00000400337 Q5XG85 94 aa10.92□□□□□ -0.66
COL18A1-204ENST00000400337 LINC01558Q9Y6Z2 57 aa10.92□□□□□ -0.66
COL18A1-204ENST00000400337 ATMQ13315 3056 aa10.92□□□□□ -0.66
COL18A1-204ENST00000400337 ITPR1Q14643 2758 aa10.92□□□□□ -0.66
COL18A1-204ENST00000400337 FP248Q71RG6 208 aaPredicted RBP10.91□□□□□ -0.66
COL18A1-204ENST00000400337 TACC2O95359 2948 aa10.9□□□□□ -0.66
COL18A1-204ENST00000400337 PANO1I0J062 215 aa10.89□□□□□ -0.67
COL18A1-204ENST00000400337 FLNCQ14315 2725 aa10.89□□□□□ -0.67
COL18A1-204ENST00000400337 KALRNO60229 2985 aa10.89□□□□□ -0.67
COL18A1-204ENST00000400337 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
COL18A1-204ENST00000400337 KRTAP4-16G5E9R7 235 aaPredicted RBP10.86□□□□□ -0.67
COL18A1-204ENST00000400337 SPINK7P58062 85 aa10.85□□□□□ -0.67
COL18A1-204ENST00000400337 COL12A1Q99715 3063 aa10.84□□□□□ -0.67
COL18A1-204ENST00000400337 ITPR2Q14571 2701 aa10.83□□□□□ -0.68
COL18A1-204ENST00000400337 FRYLO94915 3013 aa10.83□□□□□ -0.68
COL18A1-204ENST00000400337 DNAH14Q0VDD8 3507 aa10.83□□□□□ -0.68
COL18A1-204ENST00000400337 STAB2Q8WWQ8 2551 aa10.82□□□□□ -0.68
COL18A1-204ENST00000400337 LINC00483Q53H64 154 aa10.82□□□□□ -0.68
COL18A1-204ENST00000400337 Q5VSD8 79 aa10.82□□□□□ -0.68
COL18A1-204ENST00000400337 NBEAQ8NFP9 2946 aa10.8□□□□□ -0.68
COL18A1-204ENST00000400337 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
COL18A1-204ENST00000400337 BOD1L1Q8NFC6 3051 aa10.79□□□□□ -0.68
COL18A1-204ENST00000400337 DMXL2Q8TDJ6 3036 aa10.79□□□□□ -0.68
COL18A1-204ENST00000400337 Q5VV11 94 aa10.79□□□□□ -0.68
COL18A1-204ENST00000400337 ADGRG4Q8IZF6 3080 aa10.79□□□□□ -0.68
COL18A1-204ENST00000400337 CAMK2N1Q7Z7J9 78 aa10.79□□□□□ -0.68
COL18A1-204ENST00000400337 S4R3F8 94 aa10.79□□□□□ -0.68
COL18A1-204ENST00000400337 M0R2T5 61 aa10.78□□□□□ -0.68
COL18A1-204ENST00000400337 KRTAP21-3Q3LHN1 58 aa10.78□□□□□ -0.68
COL18A1-204ENST00000400337 Q6ZR54 194 aa10.78□□□□□ -0.68
COL18A1-204ENST00000400337 FLG2Q5D862 2391 aaPredicted RBP10.77□□□□□ -0.69
COL18A1-204ENST00000400337 DMAC1Q96GE9 116 aa10.73□□□□□ -0.69
COL18A1-204ENST00000400337 REV3LO60673 3130 aa10.7□□□□□ -0.7
COL18A1-204ENST00000400337 OXTP01178 125 aa10.69□□□□□ -0.7
COL18A1-204ENST00000400337 LRBAP50851 2863 aa10.69□□□□□ -0.7
COL18A1-204ENST00000400337 PRAC1Q96KF2 57 aa10.69□□□□□ -0.7
COL18A1-204ENST00000400337 A0A087X002 238 aa10.68□□□□□ -0.7
COL18A1-204ENST00000400337 LUZP6Q538Z0 58 aa10.68□□□□□ -0.7
COL18A1-204ENST00000400337 COL6A3P12111 3177 aa10.67□□□□□ -0.7
COL18A1-204ENST00000400337 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
COL18A1-204ENST00000400337 UTP20O75691 2785 aaKnown RBP10.65□□□□□ -0.7
COL18A1-204ENST00000400337 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.71
COL18A1-204ENST00000400337 KRTAP11-1Q8IUC1 163 aa10.64□□□□□ -0.71
COL18A1-204ENST00000400337 SEC61BP60468 96 aaKnown RBP10.64□□□□□ -0.71
COL18A1-204ENST00000400337 ASH1LQ9NR48 2969 aaKnown RBP10.62□□□□□ -0.71
COL18A1-204ENST00000400337 Q6ZRN7 208 aaPredicted RBP10.59□□□□□ -0.71
COL18A1-204ENST00000400337 R4GN34 69 aa10.59□□□□□ -0.71
COL18A1-204ENST00000400337 KRTAP7-1Q8IUC3 87 aa10.57□□□□□ -0.72
COL18A1-204ENST00000400337 HIVEP1P15822 2718 aa10.57□□□□□ -0.72
COL18A1-204ENST00000400337 NOTCH2NLQ7Z3S9 236 aa10.57□□□□□ -0.72
COL18A1-204ENST00000400337 ZZEF1O43149 2961 aa10.54□□□□□ -0.72
COL18A1-204ENST00000400337 CFAP47Q6ZTR5 3102 aa10.51□□□□□ -0.73
COL18A1-204ENST00000400337 RPL37P61927 97 aaKnown RBP10.47□□□□□ -0.73
COL18A1-204ENST00000400337 APCP25054 2843 aa10.47□□□□□ -0.73
COL18A1-204ENST00000400337 H1FX-AS1Q4G0G2 97 aa10.46□□□□□ -0.74
COL18A1-204ENST00000400337 EYSQ5T1H1 3165 aa10.45□□□□□ -0.74
COL18A1-204ENST00000400337 CELSR2Q9HCU4 2923 aa10.45□□□□□ -0.74
COL18A1-204ENST00000400337 KMT2BQ9UMN6 2715 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms