RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 A0A096LNT2 108 aa8.46□□□□□ -1.06
LDLRAD4-203ENST00000399848 KRTAP10-3P60369 221 aa8.44□□□□□ -1.06
LDLRAD4-203ENST00000399848 Q5VSD8 79 aa8.44□□□□□ -1.06
LDLRAD4-203ENST00000399848 STAB2Q8WWQ8 2551 aa8.43□□□□□ -1.06
LDLRAD4-203ENST00000399848 A0A0A0MQY5 61 aa8.43□□□□□ -1.06
LDLRAD4-203ENST00000399848 FAM229BQ4G0N7 80 aa8.43□□□□□ -1.06
LDLRAD4-203ENST00000399848 UTRNP46939 3433 aa8.43□□□□□ -1.06
LDLRAD4-203ENST00000399848 PLAC4Q8WY50 150 aa8.41□□□□□ -1.06
LDLRAD4-203ENST00000399848 LCE6AA0A183 80 aa8.4□□□□□ -1.06
LDLRAD4-203ENST00000399848 LINC01558Q9Y6Z2 57 aa8.39□□□□□ -1.07
LDLRAD4-203ENST00000399848 S4R3F8 94 aa8.38□□□□□ -1.07
LDLRAD4-203ENST00000399848 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
LDLRAD4-203ENST00000399848 Q8N9P0 234 aaPredicted RBP8.37□□□□□ -1.07
LDLRAD4-203ENST00000399848 TNP2Q05952 138 aa8.36□□□□□ -1.07
LDLRAD4-203ENST00000399848 ZCCHC13Q8WW36 166 aaKnown RBP8.36□□□□□ -1.07
LDLRAD4-203ENST00000399848 MAP1AP78559 2803 aaPredicted RBP8.34□□□□□ -1.07
LDLRAD4-203ENST00000399848 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
LDLRAD4-203ENST00000399848 H3BS24 57 aa8.31□□□□□ -1.08
LDLRAD4-203ENST00000399848 LAMA2P24043 3122 aaKnown RBP8.31□□□□□ -1.08
LDLRAD4-203ENST00000399848 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
LDLRAD4-203ENST00000399848 Q5XG85 94 aa8.29□□□□□ -1.08
LDLRAD4-203ENST00000399848 R4GN34 69 aa8.28□□□□□ -1.08
LDLRAD4-203ENST00000399848 Q5VV11 94 aa8.28□□□□□ -1.08
LDLRAD4-203ENST00000399848 A0A0C4DFX4 3053 aa8.27□□□□□ -1.09
LDLRAD4-203ENST00000399848 ZNF292O60281 2723 aa8.26□□□□□ -1.09
LDLRAD4-203ENST00000399848 Q5W150 140 aa8.25□□□□□ -1.09
LDLRAD4-203ENST00000399848 FP248Q71RG6 208 aaPredicted RBP8.25□□□□□ -1.09
LDLRAD4-203ENST00000399848 PLAC8Q9NZF1 115 aa8.25□□□□□ -1.09
LDLRAD4-203ENST00000399848 SPINK7P58062 85 aa8.24□□□□□ -1.09
LDLRAD4-203ENST00000399848 SPRR1AP35321 89 aa8.23□□□□□ -1.09
LDLRAD4-203ENST00000399848 PRAC1Q96KF2 57 aa8.23□□□□□ -1.09
LDLRAD4-203ENST00000399848 IGSF10Q6WRI0 2623 aa8.22□□□□□ -1.09
LDLRAD4-203ENST00000399848 KRTAP1-3Q8IUG1 177 aa8.22□□□□□ -1.09
LDLRAD4-203ENST00000399848 LINC00472Q9H8W2 130 aa8.22□□□□□ -1.09
LDLRAD4-203ENST00000399848 ROMO1P60602 79 aa8.21□□□□□ -1.1
LDLRAD4-203ENST00000399848 UTP20O75691 2785 aaKnown RBP8.2□□□□□ -1.1
LDLRAD4-203ENST00000399848 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
LDLRAD4-203ENST00000399848 APCP25054 2843 aa8.18□□□□□ -1.1
LDLRAD4-203ENST00000399848 MGAQ8IWI9 3026 aa8.18□□□□□ -1.1
LDLRAD4-203ENST00000399848 NBEAL2Q6ZNJ1 2754 aa8.17□□□□□ -1.1
LDLRAD4-203ENST00000399848 KRTAP21-3Q3LHN1 58 aa8.17□□□□□ -1.1
LDLRAD4-203ENST00000399848 KRTAP1-1Q07627 177 aa8.16□□□□□ -1.1
LDLRAD4-203ENST00000399848 SPRR1BP22528 89 aa8.16□□□□□ -1.1
LDLRAD4-203ENST00000399848 CYSTM1Q9H1C7 97 aa8.14□□□□□ -1.11
LDLRAD4-203ENST00000399848 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
LDLRAD4-203ENST00000399848 CHD7Q9P2D1 2997 aa8.11□□□□□ -1.11
LDLRAD4-203ENST00000399848 H1FX-AS1Q4G0G2 97 aa8.09□□□□□ -1.11
LDLRAD4-203ENST00000399848 Q8NDZ9 215 aa8.09□□□□□ -1.11
LDLRAD4-203ENST00000399848 FLNCQ14315 2725 aa8.08□□□□□ -1.12
LDLRAD4-203ENST00000399848 M0QZ58 72 aa8.06□□□□□ -1.12
LDLRAD4-203ENST00000399848 NSD1Q96L73 2696 aaPredicted RBP8.05□□□□□ -1.12
LDLRAD4-203ENST00000399848 Q6ZR54 194 aa8.04□□□□□ -1.12
LDLRAD4-203ENST00000399848 VPS13AQ96RL7 3174 aa8.03□□□□□ -1.12
LDLRAD4-203ENST00000399848 FRYQ5TBA9 3013 aa8.03□□□□□ -1.12
LDLRAD4-203ENST00000399848 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
LDLRAD4-203ENST00000399848 TRANK1O15050 2925 aa8□□□□□ -1.13
LDLRAD4-203ENST00000399848 ITPR1Q14643 2758 aa7.98□□□□□ -1.13
LDLRAD4-203ENST00000399848 TRIOO75962 3097 aa7.98□□□□□ -1.13
LDLRAD4-203ENST00000399848 UBR5O95071 2799 aaPredicted RBP7.97□□□□□ -1.13
LDLRAD4-203ENST00000399848 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
LDLRAD4-203ENST00000399848 MKI67P46013 3256 aaKnown RBP7.95□□□□□ -1.14
LDLRAD4-203ENST00000399848 DSPP15924 2871 aaKnown RBP7.94□□□□□ -1.14
LDLRAD4-203ENST00000399848 FREM2Q5SZK8 3169 aa7.93□□□□□ -1.14
LDLRAD4-203ENST00000399848 PANO1I0J062 215 aa7.93□□□□□ -1.14
LDLRAD4-203ENST00000399848 XIRP2A4UGR9 3374 aa7.92□□□□□ -1.14
LDLRAD4-203ENST00000399848 WDFY4Q6ZS81 3184 aa7.92□□□□□ -1.14
LDLRAD4-203ENST00000399848 KRTAP16-1A8MUX0 517 aa7.91□□□□□ -1.14
LDLRAD4-203ENST00000399848 KALRNO60229 2985 aa7.9□□□□□ -1.15
LDLRAD4-203ENST00000399848 KRTAP1-5Q9BYS1 174 aa7.89□□□□□ -1.15
LDLRAD4-203ENST00000399848 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
LDLRAD4-203ENST00000399848 PRUNE2Q8WUY3 3088 aa7.89□□□□□ -1.15
LDLRAD4-203ENST00000399848 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
LDLRAD4-203ENST00000399848 FRYLO94915 3013 aa7.86□□□□□ -1.15
LDLRAD4-203ENST00000399848 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
LDLRAD4-203ENST00000399848 KRTAP4-16G5E9R7 235 aaPredicted RBP7.85□□□□□ -1.15
LDLRAD4-203ENST00000399848 RANBP2P49792 3224 aaKnown RBP7.84□□□□□ -1.15
LDLRAD4-203ENST00000399848 KRTAP10-1P60331 282 aa7.83□□□□□ -1.16
LDLRAD4-203ENST00000399848 CELSR3Q9NYQ7 3312 aa7.8□□□□□ -1.16
LDLRAD4-203ENST00000399848 ASH1LQ9NR48 2969 aaKnown RBP7.8□□□□□ -1.16
LDLRAD4-203ENST00000399848 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
LDLRAD4-203ENST00000399848 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
LDLRAD4-203ENST00000399848 LAMA3Q16787 3333 aa7.78□□□□□ -1.16
LDLRAD4-203ENST00000399848 CHD9Q3L8U1 2897 aa7.78□□□□□ -1.16
LDLRAD4-203ENST00000399848 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
LDLRAD4-203ENST00000399848 LRBAP50851 2863 aa7.76□□□□□ -1.17
LDLRAD4-203ENST00000399848 A0A087X002 238 aa7.74□□□□□ -1.17
LDLRAD4-203ENST00000399848 C20orf166-AS1Q96NR2 134 aa7.73□□□□□ -1.17
LDLRAD4-203ENST00000399848 TENM1Q9UKZ4 2725 aa7.73□□□□□ -1.17
LDLRAD4-203ENST00000399848 REV3LO60673 3130 aa7.73□□□□□ -1.17
LDLRAD4-203ENST00000399848 DMXL2Q8TDJ6 3036 aa7.72□□□□□ -1.17
LDLRAD4-203ENST00000399848 A6NN06 94 aa7.72□□□□□ -1.17
LDLRAD4-203ENST00000399848 UNC80Q8N2C7 3258 aa7.72□□□□□ -1.17
LDLRAD4-203ENST00000399848 A8MUU9 505 aa7.71□□□□□ -1.17
LDLRAD4-203ENST00000399848 BRCA2P51587 3418 aa7.66□□□□□ -1.18
LDLRAD4-203ENST00000399848 HIVEP1P15822 2718 aa7.66□□□□□ -1.18
LDLRAD4-203ENST00000399848 NOTCH2NLQ7Z3S9 236 aa7.66□□□□□ -1.18
LDLRAD4-203ENST00000399848 COL12A1Q99715 3063 aa7.63□□□□□ -1.19
LDLRAD4-203ENST00000399848 HTTP42858 3142 aa7.61□□□□□ -1.19
LDLRAD4-203ENST00000399848 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
LDLRAD4-203ENST00000399848 A8MU10 97 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms