RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 Q5XG85 94 aa5.44□□□□□ -1.54
CACNA1C-220ENST00000399655 COL4A3Q01955 1670 aa5.44□□□□□ -1.54
CACNA1C-220ENST00000399655 A0A087WTM6 91 aa5.44□□□□□ -1.54
CACNA1C-220ENST00000399655 SETXQ7Z333 2677 aaKnown RBP5.43□□□□□ -1.54
CACNA1C-220ENST00000399655 C10orf142B7Z368 130 aa5.43□□□□□ -1.54
CACNA1C-220ENST00000399655 SMR3AQ99954 134 aa5.41□□□□□ -1.54
CACNA1C-220ENST00000399655 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
CACNA1C-220ENST00000399655 Q8NDZ9 215 aa5.39□□□□□ -1.55
CACNA1C-220ENST00000399655 P0C880 135 aa5.39□□□□□ -1.55
CACNA1C-220ENST00000399655 ZNF292O60281 2723 aa5.38□□□□□ -1.55
CACNA1C-220ENST00000399655 LINC00612Q8N6U2 182 aa5.38□□□□□ -1.55
CACNA1C-220ENST00000399655 Q5W150 140 aa5.36□□□□□ -1.55
CACNA1C-220ENST00000399655 A0A087X002 238 aa5.35□□□□□ -1.55
CACNA1C-220ENST00000399655 APCP25054 2843 aa5.34□□□□□ -1.55
CACNA1C-220ENST00000399655 A0A1W2PNU3 283 aaPredicted RBP5.34□□□□□ -1.55
CACNA1C-220ENST00000399655 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
CACNA1C-220ENST00000399655 PANO1I0J062 215 aa5.34□□□□□ -1.55
CACNA1C-220ENST00000399655 COL4A1P02462 1669 aa5.33□□□□□ -1.56
CACNA1C-220ENST00000399655 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
CACNA1C-220ENST00000399655 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
CACNA1C-220ENST00000399655 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
CACNA1C-220ENST00000399655 KLK9Q2XQG4 91 aa5.31□□□□□ -1.56
CACNA1C-220ENST00000399655 MAP1AP78559 2803 aaPredicted RBP5.31□□□□□ -1.56
CACNA1C-220ENST00000399655 A0A0G2JQZ4 141 aa5.3□□□□□ -1.56
CACNA1C-220ENST00000399655 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
CACNA1C-220ENST00000399655 TNP1P09430 55 aa5.29□□□□□ -1.56
CACNA1C-220ENST00000399655 GIG44P09565 113 aaPredicted RBP5.26□□□□□ -1.57
CACNA1C-220ENST00000399655 COL4A2P08572 1712 aa5.26□□□□□ -1.57
CACNA1C-220ENST00000399655 WISP2O76076 250 aa5.23□□□□□ -1.57
CACNA1C-220ENST00000399655 TENM3Q9P273 2699 aa5.23□□□□□ -1.57
CACNA1C-220ENST00000399655 A0A1W2PPR1 153 aa5.23□□□□□ -1.57
CACNA1C-220ENST00000399655 SPRR1BP22528 89 aa5.21□□□□□ -1.58
CACNA1C-220ENST00000399655 OXTP01178 125 aa5.2□□□□□ -1.58
CACNA1C-220ENST00000399655 UBR5O95071 2799 aaPredicted RBP5.2□□□□□ -1.58
CACNA1C-220ENST00000399655 KRTAP10-9P60411 292 aa5.2□□□□□ -1.58
CACNA1C-220ENST00000399655 A6NN06 94 aa5.19□□□□□ -1.58
CACNA1C-220ENST00000399655 Q5VSD8 79 aa5.19□□□□□ -1.58
CACNA1C-220ENST00000399655 LINC00472Q9H8W2 130 aa5.19□□□□□ -1.58
CACNA1C-220ENST00000399655 CHD9Q3L8U1 2897 aa5.17□□□□□ -1.58
CACNA1C-220ENST00000399655 A8MUU9 505 aa5.17□□□□□ -1.58
CACNA1C-220ENST00000399655 K7EIL1 84 aa5.16□□□□□ -1.58
CACNA1C-220ENST00000399655 KRTAP24-1Q3LI83 254 aa5.15□□□□□ -1.59
CACNA1C-220ENST00000399655 PLAC8Q9NZF1 115 aa5.14□□□□□ -1.59
CACNA1C-220ENST00000399655 DSPP15924 2871 aaKnown RBP5.13□□□□□ -1.59
CACNA1C-220ENST00000399655 CASC10Q5T4H9 136 aa5.12□□□□□ -1.59
CACNA1C-220ENST00000399655 ITPR1Q14643 2758 aa5.1□□□□□ -1.59
CACNA1C-220ENST00000399655 SPRR1AP35321 89 aa5.08□□□□□ -1.6
CACNA1C-220ENST00000399655 KRTAP10-11P60412 298 aa5.07□□□□□ -1.6
CACNA1C-220ENST00000399655 CYSTM1Q9H1C7 97 aa5.04□□□□□ -1.6
CACNA1C-220ENST00000399655 KRTAP11-1Q8IUC1 163 aa5.04□□□□□ -1.6
CACNA1C-220ENST00000399655 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
CACNA1C-220ENST00000399655 CENPFP49454 3210 aa5.04□□□□□ -1.6
CACNA1C-220ENST00000399655 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
CACNA1C-220ENST00000399655 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
CACNA1C-220ENST00000399655 NBEAL2Q6ZNJ1 2754 aa5.01□□□□□ -1.61
CACNA1C-220ENST00000399655 HIVEP1P15822 2718 aa5.01□□□□□ -1.61
CACNA1C-220ENST00000399655 TRIOO75962 3097 aa5□□□□□ -1.61
CACNA1C-220ENST00000399655 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
CACNA1C-220ENST00000399655 A0A096LNT2 108 aa5□□□□□ -1.61
CACNA1C-220ENST00000399655 FLNCQ14315 2725 aa4.98□□□□□ -1.61
CACNA1C-220ENST00000399655 LRBAP50851 2863 aa4.98□□□□□ -1.61
CACNA1C-220ENST00000399655 KALRNO60229 2985 aa4.96□□□□□ -1.61
CACNA1C-220ENST00000399655 KRTAP4-16G5E9R7 235 aaPredicted RBP4.96□□□□□ -1.62
CACNA1C-220ENST00000399655 SRRM2Q9UQ35 2752 aaKnown RBP4.96□□□□□ -1.62
CACNA1C-220ENST00000399655 A8MU10 97 aa4.95□□□□□ -1.62
CACNA1C-220ENST00000399655 NF1P21359 2839 aa4.94□□□□□ -1.62
CACNA1C-220ENST00000399655 TENM1Q9UKZ4 2725 aa4.93□□□□□ -1.62
CACNA1C-220ENST00000399655 TRANK1O15050 2925 aa4.91□□□□□ -1.62
CACNA1C-220ENST00000399655 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
CACNA1C-220ENST00000399655 SRCAPQ6ZRS2 3230 aa4.88□□□□□ -1.63
CACNA1C-220ENST00000399655 KRTAP10-8P60410 259 aa4.87□□□□□ -1.63
CACNA1C-220ENST00000399655 EP400Q96L91 3159 aa4.86□□□□□ -1.63
CACNA1C-220ENST00000399655 PDZD2O15018 2839 aa4.84□□□□□ -1.63
CACNA1C-220ENST00000399655 TGP01266 2768 aa4.83□□□□□ -1.64
CACNA1C-220ENST00000399655 LCE6AA0A183 80 aa4.82□□□□□ -1.64
CACNA1C-220ENST00000399655 CEP350Q5VT06 3117 aa4.79□□□□□ -1.64
CACNA1C-220ENST00000399655 CELSR2Q9HCU4 2923 aa4.79□□□□□ -1.64
CACNA1C-220ENST00000399655 DNAH12Q6ZR08 3092 aa4.77□□□□□ -1.65
CACNA1C-220ENST00000399655 INE1O15225 51 aa4.76□□□□□ -1.65
CACNA1C-220ENST00000399655 NIPBLQ6KC79 2804 aaeCLIP4.76□□□□□ -1.65
CACNA1C-220ENST00000399655 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
CACNA1C-220ENST00000399655 Q6ZRN7 208 aaPredicted RBP4.73□□□□□ -1.65
CACNA1C-220ENST00000399655 CRYBG3Q68DQ2 2970 aa4.72□□□□□ -1.65
CACNA1C-220ENST00000399655 GOLGB1Q14789 3259 aaKnown RBP4.72□□□□□ -1.65
CACNA1C-220ENST00000399655 TNRC18O15417 2968 aaPredicted RBP4.72□□□□□ -1.65
CACNA1C-220ENST00000399655 CHD7Q9P2D1 2997 aa4.7□□□□□ -1.66
CACNA1C-220ENST00000399655 KRTAP10-1P60331 282 aa4.69□□□□□ -1.66
CACNA1C-220ENST00000399655 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
CACNA1C-220ENST00000399655 FRYLO94915 3013 aa4.69□□□□□ -1.66
CACNA1C-220ENST00000399655 A0A0C4DFX4 3053 aa4.65□□□□□ -1.66
CACNA1C-220ENST00000399655 LAMA2P24043 3122 aaKnown RBP4.63□□□□□ -1.67
CACNA1C-220ENST00000399655 H0YAA0 97 aa4.63□□□□□ -1.67
CACNA1C-220ENST00000399655 ASH1LQ9NR48 2969 aaKnown RBP4.62□□□□□ -1.67
CACNA1C-220ENST00000399655 KRTAP10-2P60368 255 aa4.58□□□□□ -1.68
CACNA1C-220ENST00000399655 CFAP54Q96N23 3096 aa4.58□□□□□ -1.68
CACNA1C-220ENST00000399655 KRTAP12-2P59991 146 aa4.56□□□□□ -1.68
CACNA1C-220ENST00000399655 KRTAP1-5Q9BYS1 174 aa4.55□□□□□ -1.68
CACNA1C-220ENST00000399655 FRYQ5TBA9 3013 aa4.55□□□□□ -1.68
CACNA1C-220ENST00000399655 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
CACNA1C-220ENST00000399655 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms