RNA–Protein interactions for RNA: ENST00000399591.5

CACNA1C-205, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-205ENST00000399591 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
CACNA1C-205ENST00000399591 SZT2Q5T011 3432 aa7.1□□□□□ -1.27
CACNA1C-205ENST00000399591 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
CACNA1C-205ENST00000399591 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-205ENST00000399591 M0QZ58 72 aa7.09□□□□□ -1.27
CACNA1C-205ENST00000399591 LCE6AA0A183 80 aa7.08□□□□□ -1.28
CACNA1C-205ENST00000399591 CENPEQ02224 2701 aa7.08□□□□□ -1.28
CACNA1C-205ENST00000399591 ANKRD17O75179 2603 aaKnown RBP7.08□□□□□ -1.28
CACNA1C-205ENST00000399591 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
CACNA1C-205ENST00000399591 CHD7Q9P2D1 2997 aa7.04□□□□□ -1.28
CACNA1C-205ENST00000399591 A0A0C4DFX4 3053 aa7.04□□□□□ -1.28
CACNA1C-205ENST00000399591 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
CACNA1C-205ENST00000399591 SETXQ7Z333 2677 aaKnown RBP7.03□□□□□ -1.28
CACNA1C-205ENST00000399591 A0A096LNT2 108 aa7.01□□□□□ -1.29
CACNA1C-205ENST00000399591 KRTAP1-3Q8IUG1 177 aa7.01□□□□□ -1.29
CACNA1C-205ENST00000399591 PRR34Q9NV39 138 aa7.01□□□□□ -1.29
CACNA1C-205ENST00000399591 OXTP01178 125 aa7□□□□□ -1.29
CACNA1C-205ENST00000399591 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
CACNA1C-205ENST00000399591 CHD9Q3L8U1 2897 aa6.99□□□□□ -1.29
CACNA1C-205ENST00000399591 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
CACNA1C-205ENST00000399591 KRTAP1-1Q07627 177 aa6.98□□□□□ -1.29
CACNA1C-205ENST00000399591 RPL37P61927 97 aaKnown RBP6.96□□□□□ -1.29
CACNA1C-205ENST00000399591 PRUNE2Q8WUY3 3088 aa6.96□□□□□ -1.29
CACNA1C-205ENST00000399591 GIG44P09565 113 aaPredicted RBP6.96□□□□□ -1.3
CACNA1C-205ENST00000399591 RANBP2P49792 3224 aaKnown RBP6.95□□□□□ -1.3
CACNA1C-205ENST00000399591 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
CACNA1C-205ENST00000399591 CELSR3Q9NYQ7 3312 aa6.94□□□□□ -1.3
CACNA1C-205ENST00000399591 MMP24-AS1A0A0U1RRL7 71 aa6.93□□□□□ -1.3
CACNA1C-205ENST00000399591 Q5W150 140 aa6.91□□□□□ -1.3
CACNA1C-205ENST00000399591 PCSK5Q92824 1860 aa6.91□□□□□ -1.3
CACNA1C-205ENST00000399591 ASB16-AS1Q495Z4 193 aa6.9□□□□□ -1.3
CACNA1C-205ENST00000399591 TRANK1O15050 2925 aa6.9□□□□□ -1.31
CACNA1C-205ENST00000399591 USP34Q70CQ2 3546 aa6.89□□□□□ -1.31
CACNA1C-205ENST00000399591 Q8NDZ9 215 aa6.89□□□□□ -1.31
CACNA1C-205ENST00000399591 STAB1Q9NY15 2570 aa6.89□□□□□ -1.31
CACNA1C-205ENST00000399591 AKAP13Q12802 2813 aa6.88□□□□□ -1.31
CACNA1C-205ENST00000399591 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
CACNA1C-205ENST00000399591 MYO15AQ9UKN7 3530 aa6.87□□□□□ -1.31
CACNA1C-205ENST00000399591 ITPR3Q14573 2671 aa6.87□□□□□ -1.31
CACNA1C-205ENST00000399591 TEP1Q99973 2627 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-205ENST00000399591 SPEGQ15772 3267 aa6.86□□□□□ -1.31
CACNA1C-205ENST00000399591 NDUFAF8A1L188 74 aa6.86□□□□□ -1.31
CACNA1C-205ENST00000399591 VCANP13611 3396 aa6.85□□□□□ -1.31
CACNA1C-205ENST00000399591 HELZ2Q9BYK8 2649 aaKnown RBP6.85□□□□□ -1.31
CACNA1C-205ENST00000399591 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
CACNA1C-205ENST00000399591 SPTBN5Q9NRC6 3674 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-205ENST00000399591 CFAP54Q96N23 3096 aa6.83□□□□□ -1.32
CACNA1C-205ENST00000399591 CFAP46Q8IYW2 2715 aa6.82□□□□□ -1.32
CACNA1C-205ENST00000399591 PLAC8Q9NZF1 115 aa6.8□□□□□ -1.32
CACNA1C-205ENST00000399591 TRIOO75962 3097 aa6.8□□□□□ -1.32
CACNA1C-205ENST00000399591 EYSQ5T1H1 3165 aa6.79□□□□□ -1.32
CACNA1C-205ENST00000399591 FLNAP21333 2647 aaKnown RBP6.78□□□□□ -1.32
CACNA1C-205ENST00000399591 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
CACNA1C-205ENST00000399591 MAP1AP78559 2803 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-205ENST00000399591 REV3LO60673 3130 aa6.77□□□□□ -1.33
CACNA1C-205ENST00000399591 A6NN06 94 aa6.76□□□□□ -1.33
CACNA1C-205ENST00000399591 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
CACNA1C-205ENST00000399591 LAMA1P25391 3075 aa6.75□□□□□ -1.33
CACNA1C-205ENST00000399591 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
CACNA1C-205ENST00000399591 P0C880 135 aa6.72□□□□□ -1.33
CACNA1C-205ENST00000399591 Q6ZR54 194 aa6.72□□□□□ -1.33
CACNA1C-205ENST00000399591 VPS13AQ96RL7 3174 aa6.72□□□□□ -1.33
CACNA1C-205ENST00000399591 A8MU10 97 aa6.71□□□□□ -1.33
CACNA1C-205ENST00000399591 ZNF292O60281 2723 aa6.71□□□□□ -1.33
CACNA1C-205ENST00000399591 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
CACNA1C-205ENST00000399591 CR1P17927 2039 aa6.69□□□□□ -1.34
CACNA1C-205ENST00000399591 CHD6Q8TD26 2715 aa6.68□□□□□ -1.34
CACNA1C-205ENST00000399591 TEX15Q9BXT5 2789 aa6.68□□□□□ -1.34
CACNA1C-205ENST00000399591 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
CACNA1C-205ENST00000399591 TNRC18O15417 2968 aaPredicted RBP6.66□□□□□ -1.34
CACNA1C-205ENST00000399591 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
CACNA1C-205ENST00000399591 COL6A3P12111 3177 aa6.66□□□□□ -1.34
CACNA1C-205ENST00000399591 NBEAL1Q6ZS30 2694 aa6.66□□□□□ -1.34
CACNA1C-205ENST00000399591 COL6A5A8TX70 2615 aa6.64□□□□□ -1.35
CACNA1C-205ENST00000399591 FREM2Q5SZK8 3169 aa6.63□□□□□ -1.35
CACNA1C-205ENST00000399591 WDFY4Q6ZS81 3184 aa6.6□□□□□ -1.35
CACNA1C-205ENST00000399591 WDFY3Q8IZQ1 3526 aa6.6□□□□□ -1.35
CACNA1C-205ENST00000399591 A8MUU9 505 aa6.59□□□□□ -1.35
CACNA1C-205ENST00000399591 PANO1I0J062 215 aa6.59□□□□□ -1.35
CACNA1C-205ENST00000399591 MGAQ8IWI9 3026 aa6.58□□□□□ -1.36
CACNA1C-205ENST00000399591 SPRR1BP22528 89 aa6.58□□□□□ -1.36
CACNA1C-205ENST00000399591 SPRR1AP35321 89 aa6.57□□□□□ -1.36
CACNA1C-205ENST00000399591 KRTAP21-3Q3LHN1 58 aa6.56□□□□□ -1.36
CACNA1C-205ENST00000399591 UNC79Q9P2D8 2635 aa6.55□□□□□ -1.36
CACNA1C-205ENST00000399591 FLG2Q5D862 2391 aaPredicted RBP6.55□□□□□ -1.36
CACNA1C-205ENST00000399591 KRTAP1-5Q9BYS1 174 aa6.53□□□□□ -1.36
CACNA1C-205ENST00000399591 FRYLO94915 3013 aa6.52□□□□□ -1.37
CACNA1C-205ENST00000399591 DSPP15924 2871 aaKnown RBP6.52□□□□□ -1.37
CACNA1C-205ENST00000399591 TNP1P09430 55 aa6.49□□□□□ -1.37
CACNA1C-205ENST00000399591 UBR5O95071 2799 aaPredicted RBP6.49□□□□□ -1.37
CACNA1C-205ENST00000399591 A0A1B0GVY2 172 aa6.48□□□□□ -1.37
CACNA1C-205ENST00000399591 KRTAP10-8P60410 259 aa6.46□□□□□ -1.38
CACNA1C-205ENST00000399591 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-205ENST00000399591 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
CACNA1C-205ENST00000399591 DMBT1Q9UGM3 2413 aaPredicted RBP6.45□□□□□ -1.38
CACNA1C-205ENST00000399591 STAB2Q8WWQ8 2551 aa6.45□□□□□ -1.38
CACNA1C-205ENST00000399591 FRYQ5TBA9 3013 aa6.42□□□□□ -1.38
CACNA1C-205ENST00000399591 GCN1Q92616 2671 aaKnown RBP6.42□□□□□ -1.38
CACNA1C-205ENST00000399591 A0A087X002 238 aa6.41□□□□□ -1.38
CACNA1C-205ENST00000399591 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms