RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 TSPAN13O95857 204 aa10.24□□□□□ -0.77
CTNS-203ENST00000399306 GHRHP01286 108 aa10.24□□□□□ -0.77
CTNS-203ENST00000399306 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
CTNS-203ENST00000399306 SMIM29Q86T20 159 aa10.24□□□□□ -0.77
CTNS-203ENST00000399306 SPINK1P00995 79 aa10.23□□□□□ -0.77
CTNS-203ENST00000399306 RPS29P62273 56 aaKnown RBP10.23□□□□□ -0.77
CTNS-203ENST00000399306 C9orf153Q5TBE3 101 aa10.23□□□□□ -0.77
CTNS-203ENST00000399306 PSMB2P49721 201 aa10.22□□□□□ -0.77
CTNS-203ENST00000399306 FAM218AQ96MZ4 157 aa10.2□□□□□ -0.78
CTNS-203ENST00000399306 H3BQ85 93 aa10.18□□□□□ -0.78
CTNS-203ENST00000399306 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
CTNS-203ENST00000399306 F8WEM9 126 aa10.16□□□□□ -0.78
CTNS-203ENST00000399306 CD164Q04900 197 aa10.16□□□□□ -0.78
CTNS-203ENST00000399306 CLEC2BQ92478 149 aa10.14□□□□□ -0.79
CTNS-203ENST00000399306 DNAL4O96015 105 aa10.13□□□□□ -0.79
CTNS-203ENST00000399306 Q6JHZ5 121 aa10.13□□□□□ -0.79
CTNS-203ENST00000399306 SNHG12Q9BXW3 62 aa10.13□□□□□ -0.79
CTNS-203ENST00000399306 TRACP01848 142 aa10.12□□□□□ -0.79
CTNS-203ENST00000399306 SCGB1C2P0DMR2 95 aa10.12□□□□□ -0.79
CTNS-203ENST00000399306 LST1O00453 97 aa10.11□□□□□ -0.79
CTNS-203ENST00000399306 ORMDL1Q9P0S3 153 aa10.09□□□□□ -0.79
CTNS-203ENST00000399306 LYRM7Q5U5X0 104 aa10.08□□□□□ -0.8
CTNS-203ENST00000399306 FP248Q71RG6 208 aaPredicted RBP10.08□□□□□ -0.8
CTNS-203ENST00000399306 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
CTNS-203ENST00000399306 TMEM256-PLSCR3K7ERE1 68 aa10.07□□□□□ -0.8
CTNS-203ENST00000399306 BATFQ16520 125 aa10.07□□□□□ -0.8
CTNS-203ENST00000399306 Q5XG85 94 aa10.07□□□□□ -0.8
CTNS-203ENST00000399306 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
CTNS-203ENST00000399306 PRR4Q16378 134 aa10.06□□□□□ -0.8
CTNS-203ENST00000399306 FABP2P12104 132 aa10.04□□□□□ -0.8
CTNS-203ENST00000399306 LRP2P98164 4655 aa10.04□□□□□ -0.8
CTNS-203ENST00000399306 LCE2BO14633 110 aa10.03□□□□□ -0.8
CTNS-203ENST00000399306 UBE2V1Q13404 147 aa10.03□□□□□ -0.8
CTNS-203ENST00000399306 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
CTNS-203ENST00000399306 ATXN8Q156A1 80 aa10.02□□□□□ -0.81
CTNS-203ENST00000399306 IGFL1Q6UW32 110 aa10.02□□□□□ -0.81
CTNS-203ENST00000399306 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
CTNS-203ENST00000399306 H3BMG7 143 aa10□□□□□ -0.81
CTNS-203ENST00000399306 Q6Q795 121 aa10□□□□□ -0.81
CTNS-203ENST00000399306 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
CTNS-203ENST00000399306 RETNLBQ9BQ08 111 aa10□□□□□ -0.81
CTNS-203ENST00000399306 TAX1BP3O14907 124 aa9.99□□□□□ -0.81
CTNS-203ENST00000399306 TCL1BO95988 128 aa9.99□□□□□ -0.81
CTNS-203ENST00000399306 NAA38Q9BRA0 125 aaKnown RBP9.99□□□□□ -0.81
CTNS-203ENST00000399306 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
CTNS-203ENST00000399306 H3BUT2 72 aa9.98□□□□□ -0.81
CTNS-203ENST00000399306 TPRXLQ17RH7 258 aa9.97□□□□□ -0.81
CTNS-203ENST00000399306 A0A0G2JQZ4 141 aa9.96□□□□□ -0.82
CTNS-203ENST00000399306 ASB16-AS1Q495Z4 193 aa9.96□□□□□ -0.82
CTNS-203ENST00000399306 TRBV7-7A0A0K0K1E9 115 aa9.95□□□□□ -0.82
CTNS-203ENST00000399306 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
CTNS-203ENST00000399306 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
CTNS-203ENST00000399306 A0A1W2PPM0 123 aa9.94□□□□□ -0.82
CTNS-203ENST00000399306 TEN1Q86WV5 123 aa9.94□□□□□ -0.82
CTNS-203ENST00000399306 LPAP08519 4548 aa9.94□□□□□ -0.82
CTNS-203ENST00000399306 ANKRD29Q8N6D5 301 aa9.91□□□□□ -0.82
CTNS-203ENST00000399306 UBR4Q5T4S7 5183 aa9.9□□□□□ -0.83
CTNS-203ENST00000399306 SS18L2Q9UHA2 77 aa9.89□□□□□ -0.83
CTNS-203ENST00000399306 TRBV7-4A0A0J9YYF1 115 aa9.88□□□□□ -0.83
CTNS-203ENST00000399306 RBM3P98179 157 aaKnown RBP9.88□□□□□ -0.83
CTNS-203ENST00000399306 C1orf195Q5TG92 126 aa9.88□□□□□ -0.83
CTNS-203ENST00000399306 JMJD7-PLA2G4BH0Y9G9 81 aa9.87□□□□□ -0.83
CTNS-203ENST00000399306 KRTAP13-3Q3SY46 172 aa9.87□□□□□ -0.83
CTNS-203ENST00000399306 A0A1W2PNM2 257 aa9.85□□□□□ -0.83
CTNS-203ENST00000399306 PCP4L1A6NKN8 68 aa9.85□□□□□ -0.83
CTNS-203ENST00000399306 DSCR8Q96T75 97 aa9.85□□□□□ -0.83
CTNS-203ENST00000399306 C9JAW5 83 aa9.84□□□□□ -0.83
CTNS-203ENST00000399306 H3BT86 120 aa9.84□□□□□ -0.83
CTNS-203ENST00000399306 C21orf62-AS1Q17RA5 79 aa9.83□□□□□ -0.84
CTNS-203ENST00000399306 CDIP1Q9H305 208 aa9.83□□□□□ -0.84
CTNS-203ENST00000399306 SPCS1Q9Y6A9 102 aa9.82□□□□□ -0.84
CTNS-203ENST00000399306 PDE6GP18545 87 aa9.81□□□□□ -0.84
CTNS-203ENST00000399306 A0A087WSZ3 146 aa9.8□□□□□ -0.84
CTNS-203ENST00000399306 CCKP06307 115 aa9.8□□□□□ -0.84
CTNS-203ENST00000399306 A0A1B0GW54 56 aa9.79□□□□□ -0.84
CTNS-203ENST00000399306 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
CTNS-203ENST00000399306 LOC110117498A0A087WWA1 95 aa9.78□□□□□ -0.84
CTNS-203ENST00000399306 A0A1B0GV72 72 aa9.77□□□□□ -0.85
CTNS-203ENST00000399306 K7EP34 96 aa9.74□□□□□ -0.85
CTNS-203ENST00000399306 Q6ZQT0 140 aa9.74□□□□□ -0.85
CTNS-203ENST00000399306 MUC17Q685J3 4493 aa9.72□□□□□ -0.85
CTNS-203ENST00000399306 XP32Q5T750 250 aa9.72□□□□□ -0.85
CTNS-203ENST00000399306 Q96NJ1 140 aa9.71□□□□□ -0.86
CTNS-203ENST00000399306 RNF213Q63HN8 5207 aa9.71□□□□□ -0.86
CTNS-203ENST00000399306 GTF2H5Q6ZYL4 71 aa9.7□□□□□ -0.86
CTNS-203ENST00000399306 VPS25Q9BRG1 176 aa9.69□□□□□ -0.86
CTNS-203ENST00000399306 C14orf132Q9NPU4 83 aa9.68□□□□□ -0.86
CTNS-203ENST00000399306 MTURNQ8N3F0 131 aa9.67□□□□□ -0.86
CTNS-203ENST00000399306 LINC00472Q9H8W2 130 aa9.67□□□□□ -0.86
CTNS-203ENST00000399306 PRO0461Q9UI25 63 aa9.67□□□□□ -0.86
CTNS-203ENST00000399306 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
CTNS-203ENST00000399306 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
CTNS-203ENST00000399306 SEC61BP60468 96 aaKnown RBP9.64□□□□□ -0.87
CTNS-203ENST00000399306 F8W1H4 67 aa9.61□□□□□ -0.87
CTNS-203ENST00000399306 J3KT08 172 aa9.61□□□□□ -0.87
CTNS-203ENST00000399306 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
CTNS-203ENST00000399306 SIGMAR1Q99720 223 aa9.59□□□□□ -0.87
CTNS-203ENST00000399306 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
CTNS-203ENST00000399306 NREPQ16612 68 aa9.53□□□□□ -0.88
CTNS-203ENST00000399306 MUC2Q02817 5179 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms