RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 VAMP3Q15836 100 aa7.28□□□□□ -1.24
HLA-DQB1-203ENST00000399082 IGLV5-48A0A075B6I7 105 aa7.27□□□□□ -1.25
HLA-DQB1-203ENST00000399082 hADV29S1A0JD25 119 aa7.26□□□□□ -1.25
HLA-DQB1-203ENST00000399082 TYMSOSQ8TAI1 123 aa7.26□□□□□ -1.25
HLA-DQB1-203ENST00000399082 KRTAP4-9Q9BYQ8 210 aa7.26□□□□□ -1.25
HLA-DQB1-203ENST00000399082 Q6ZQY7 126 aa7.25□□□□□ -1.25
HLA-DQB1-203ENST00000399082 SMIM29Q86T20 159 aa7.25□□□□□ -1.25
HLA-DQB1-203ENST00000399082 H0YGX0 51 aa7.24□□□□□ -1.25
HLA-DQB1-203ENST00000399082 Q8N377 158 aa7.24□□□□□ -1.25
HLA-DQB1-203ENST00000399082 DEFB105AQ8NG35 78 aa7.24□□□□□ -1.25
HLA-DQB1-203ENST00000399082 CLEC2BQ92478 149 aa7.24□□□□□ -1.25
HLA-DQB1-203ENST00000399082 SLC25A20O43772 301 aa7.23□□□□□ -1.25
HLA-DQB1-203ENST00000399082 BATFQ16520 125 aa7.23□□□□□ -1.25
HLA-DQB1-203ENST00000399082 NAA38Q9BRA0 125 aaKnown RBP7.23□□□□□ -1.25
HLA-DQB1-203ENST00000399082 IGLV9-49A0A0B4J1Y8 123 aa7.22□□□□□ -1.25
HLA-DQB1-203ENST00000399082 TEX49A0A1B0GTD5 131 aa7.22□□□□□ -1.25
HLA-DQB1-203ENST00000399082 PSMB2P49721 201 aa7.22□□□□□ -1.25
HLA-DQB1-203ENST00000399082 MOBPQ13875 183 aa7.22□□□□□ -1.25
HLA-DQB1-203ENST00000399082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.21□□□□□ -1.26
HLA-DQB1-203ENST00000399082 SNHG12Q9BXW3 62 aa7.21□□□□□ -1.26
HLA-DQB1-203ENST00000399082 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
HLA-DQB1-203ENST00000399082 A0A1B0GX51 115 aa7.19□□□□□ -1.26
HLA-DQB1-203ENST00000399082 Q8NBF4 154 aa7.19□□□□□ -1.26
HLA-DQB1-203ENST00000399082 TAX1BP3O14907 124 aa7.18□□□□□ -1.26
HLA-DQB1-203ENST00000399082 LINC00304Q8N9R0 145 aa7.18□□□□□ -1.26
HLA-DQB1-203ENST00000399082 COX6CP09669 75 aa7.17□□□□□ -1.26
HLA-DQB1-203ENST00000399082 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
HLA-DQB1-203ENST00000399082 SSBP3-AS1Q7Z2R9 100 aa7.17□□□□□ -1.26
HLA-DQB1-203ENST00000399082 LAMTOR3Q9UHA4 124 aa7.17□□□□□ -1.26
HLA-DQB1-203ENST00000399082 PCP4L1A6NKN8 68 aa7.16□□□□□ -1.26
HLA-DQB1-203ENST00000399082 LST1O00453 97 aa7.16□□□□□ -1.26
HLA-DQB1-203ENST00000399082 KRTAP4-2Q9BYR5 136 aa7.16□□□□□ -1.26
HLA-DQB1-203ENST00000399082 PPDPFLQ8WWR9 84 aa7.15□□□□□ -1.26
HLA-DQB1-203ENST00000399082 A0A0G2JQZ4 141 aa7.14□□□□□ -1.27
HLA-DQB1-203ENST00000399082 SCGB1C2P0DMR2 95 aa7.14□□□□□ -1.27
HLA-DQB1-203ENST00000399082 C9orf118A6NHY6 69 aa7.13□□□□□ -1.27
HLA-DQB1-203ENST00000399082 H3BUT2 72 aa7.13□□□□□ -1.27
HLA-DQB1-203ENST00000399082 TCL1BO95988 128 aa7.13□□□□□ -1.27
HLA-DQB1-203ENST00000399082 TRACP01848 142 aa7.13□□□□□ -1.27
HLA-DQB1-203ENST00000399082 OCIAD2Q56VL3 154 aa7.13□□□□□ -1.27
HLA-DQB1-203ENST00000399082 IGLV8-61A0A075B6I0 122 aa7.12□□□□□ -1.27
HLA-DQB1-203ENST00000399082 SNCGO76070 127 aa7.11□□□□□ -1.27
HLA-DQB1-203ENST00000399082 DNAL4O96015 105 aa7.1□□□□□ -1.27
HLA-DQB1-203ENST00000399082 SPAG11AQ6PDA7 123 aa7.1□□□□□ -1.27
HLA-DQB1-203ENST00000399082 A0A1W2PPM0 123 aa7.09□□□□□ -1.27
HLA-DQB1-203ENST00000399082 NDUFV3P56181 108 aaKnown RBP7.09□□□□□ -1.27
HLA-DQB1-203ENST00000399082 COL5A1-AS1Q5SY13 56 aa7.09□□□□□ -1.27
HLA-DQB1-203ENST00000399082 ORMDL1Q9P0S3 153 aa7.09□□□□□ -1.27
HLA-DQB1-203ENST00000399082 SPINK1P00995 79 aa7.08□□□□□ -1.28
HLA-DQB1-203ENST00000399082 FABP2P12104 132 aa7.08□□□□□ -1.28
HLA-DQB1-203ENST00000399082 ATXN8Q156A1 80 aa7.08□□□□□ -1.28
HLA-DQB1-203ENST00000399082 LCE4AQ5TA78 99 aa7.08□□□□□ -1.28
HLA-DQB1-203ENST00000399082 IGFL1Q6UW32 110 aa7.08□□□□□ -1.28
HLA-DQB1-203ENST00000399082 F8WEM9 126 aa7.07□□□□□ -1.28
HLA-DQB1-203ENST00000399082 HRCT1Q6UXD1 115 aa7.07□□□□□ -1.28
HLA-DQB1-203ENST00000399082 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
HLA-DQB1-203ENST00000399082 RETNLBQ9BQ08 111 aa7.06□□□□□ -1.28
HLA-DQB1-203ENST00000399082 TRBV20-1A0A075B6N2 111 aa7.05□□□□□ -1.28
HLA-DQB1-203ENST00000399082 LYRM7Q5U5X0 104 aa7.05□□□□□ -1.28
HLA-DQB1-203ENST00000399082 TMEM256-PLSCR3K7ERE1 68 aa7.04□□□□□ -1.28
HLA-DQB1-203ENST00000399082 CD164Q04900 197 aa7.04□□□□□ -1.28
HLA-DQB1-203ENST00000399082 UBE2V1Q13404 147 aa7.04□□□□□ -1.28
HLA-DQB1-203ENST00000399082 Q6JHZ5 121 aa7.04□□□□□ -1.28
HLA-DQB1-203ENST00000399082 H3BMG7 143 aa7.03□□□□□ -1.28
HLA-DQB1-203ENST00000399082 H3BQ85 93 aa7.03□□□□□ -1.28
HLA-DQB1-203ENST00000399082 BAALC-AS2P0C853 105 aa7.03□□□□□ -1.28
HLA-DQB1-203ENST00000399082 A0A1B0GV72 72 aa7.02□□□□□ -1.29
HLA-DQB1-203ENST00000399082 LPAP08519 4548 aa7□□□□□ -1.29
HLA-DQB1-203ENST00000399082 C9JAW5 83 aa7□□□□□ -1.29
HLA-DQB1-203ENST00000399082 PRR4Q16378 134 aa7□□□□□ -1.29
HLA-DQB1-203ENST00000399082 Q5XG85 94 aa7□□□□□ -1.29
HLA-DQB1-203ENST00000399082 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
HLA-DQB1-203ENST00000399082 SPCS1Q9Y6A9 102 aa7□□□□□ -1.29
HLA-DQB1-203ENST00000399082 LRP2P98164 4655 aa7□□□□□ -1.29
HLA-DQB1-203ENST00000399082 A0A1W2PNM2 257 aa6.99□□□□□ -1.29
HLA-DQB1-203ENST00000399082 MTURNQ8N3F0 131 aa6.99□□□□□ -1.29
HLA-DQB1-203ENST00000399082 TRBV7-7A0A0K0K1E9 115 aa6.98□□□□□ -1.29
HLA-DQB1-203ENST00000399082 Q6Q795 121 aa6.98□□□□□ -1.29
HLA-DQB1-203ENST00000399082 TRBV7-4A0A0J9YYF1 115 aa6.97□□□□□ -1.29
HLA-DQB1-203ENST00000399082 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
HLA-DQB1-203ENST00000399082 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
HLA-DQB1-203ENST00000399082 UBR4Q5T4S7 5183 aa6.97□□□□□ -1.29
HLA-DQB1-203ENST00000399082 K7EP34 96 aa6.96□□□□□ -1.3
HLA-DQB1-203ENST00000399082 H3BT86 120 aa6.95□□□□□ -1.3
HLA-DQB1-203ENST00000399082 FP248Q71RG6 208 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQB1-203ENST00000399082 TEN1Q86WV5 123 aa6.95□□□□□ -1.3
HLA-DQB1-203ENST00000399082 OBSCN-AS1Q96MR7 158 aa6.95□□□□□ -1.3
HLA-DQB1-203ENST00000399082 PRO0461Q9UI25 63 aa6.95□□□□□ -1.3
HLA-DQB1-203ENST00000399082 IGLV7-46A0A075B6I9 117 aa6.94□□□□□ -1.3
HLA-DQB1-203ENST00000399082 RBM3P98179 157 aaKnown RBP6.94□□□□□ -1.3
HLA-DQB1-203ENST00000399082 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
HLA-DQB1-203ENST00000399082 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
HLA-DQB1-203ENST00000399082 A0A087WSZ3 146 aa6.91□□□□□ -1.3
HLA-DQB1-203ENST00000399082 CCKP06307 115 aa6.91□□□□□ -1.3
HLA-DQB1-203ENST00000399082 JMJD7-PLA2G4BH0Y9G9 81 aa6.9□□□□□ -1.3
HLA-DQB1-203ENST00000399082 TPRXLQ17RH7 258 aa6.9□□□□□ -1.3
HLA-DQB1-203ENST00000399082 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
HLA-DQB1-203ENST00000399082 Q6ZQT0 140 aa6.9□□□□□ -1.3
HLA-DQB1-203ENST00000399082 LOC110117498A0A087WWA1 95 aa6.89□□□□□ -1.31
HLA-DQB1-203ENST00000399082 DSCR8Q96T75 97 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms