RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 KRTAP1-5Q9BYS1 174 aa11.67□□□□□ -0.54
KDM2A-202ENST00000398645 CEP295Q9C0D2 2601 aa11.66□□□□□ -0.54
KDM2A-202ENST00000398645 Q5VSD8 79 aa11.64□□□□□ -0.55
KDM2A-202ENST00000398645 PIEZO1Q92508 2521 aa11.61□□□□□ -0.55
KDM2A-202ENST00000398645 KRTAP10-2P60368 255 aa11.61□□□□□ -0.55
KDM2A-202ENST00000398645 SPRR1AP35321 89 aa11.6□□□□□ -0.55
KDM2A-202ENST00000398645 A8MU10 97 aa11.59□□□□□ -0.55
KDM2A-202ENST00000398645 FASNP49327 2511 aaKnown RBP11.58□□□□□ -0.56
KDM2A-202ENST00000398645 KRTAP10-1P60331 282 aa11.58□□□□□ -0.56
KDM2A-202ENST00000398645 CFAP54Q96N23 3096 aa11.57□□□□□ -0.56
KDM2A-202ENST00000398645 PRRC2CQ9Y520 2896 aaKnown RBP11.56□□□□□ -0.56
KDM2A-202ENST00000398645 Q6ZR54 194 aa11.55□□□□□ -0.56
KDM2A-202ENST00000398645 PANO1I0J062 215 aa11.53□□□□□ -0.56
KDM2A-202ENST00000398645 MKI67P46013 3256 aaKnown RBP11.53□□□□□ -0.56
KDM2A-202ENST00000398645 A0A087X002 238 aa11.52□□□□□ -0.57
KDM2A-202ENST00000398645 NOTCH2NLQ7Z3S9 236 aa11.52□□□□□ -0.57
KDM2A-202ENST00000398645 XIRP2A4UGR9 3374 aa11.5□□□□□ -0.57
KDM2A-202ENST00000398645 PLAC4Q8WY50 150 aa11.5□□□□□ -0.57
KDM2A-202ENST00000398645 USP24Q9UPU5 2620 aa11.5□□□□□ -0.57
KDM2A-202ENST00000398645 C20orf166-AS1Q96NR2 134 aa11.48□□□□□ -0.57
KDM2A-202ENST00000398645 KRTAP16-1A8MUX0 517 aa11.43□□□□□ -0.58
KDM2A-202ENST00000398645 SEC61BP60468 96 aaKnown RBP11.43□□□□□ -0.58
KDM2A-202ENST00000398645 A0A0C4DFX4 3053 aa11.4□□□□□ -0.58
KDM2A-202ENST00000398645 SPRR1BP22528 89 aa11.38□□□□□ -0.59
KDM2A-202ENST00000398645 FREM2Q5SZK8 3169 aa11.36□□□□□ -0.59
KDM2A-202ENST00000398645 NDUFAF8A1L188 74 aa11.35□□□□□ -0.59
KDM2A-202ENST00000398645 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.59
KDM2A-202ENST00000398645 KRTAP25-1Q3LHN0 102 aa11.32□□□□□ -0.6
KDM2A-202ENST00000398645 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
KDM2A-202ENST00000398645 DNAH14Q0VDD8 3507 aa11.25□□□□□ -0.61
KDM2A-202ENST00000398645 KRTAP29-1A8MX34 341 aaPredicted RBP11.24□□□□□ -0.61
KDM2A-202ENST00000398645 TRIOO75962 3097 aa11.24□□□□□ -0.61
KDM2A-202ENST00000398645 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
KDM2A-202ENST00000398645 A6NN06 94 aa11.22□□□□□ -0.61
KDM2A-202ENST00000398645 LAMA2P24043 3122 aaKnown RBP11.21□□□□□ -0.61
KDM2A-202ENST00000398645 A8MUU9 505 aa11.19□□□□□ -0.62
KDM2A-202ENST00000398645 BRCA2P51587 3418 aa11.18□□□□□ -0.62
KDM2A-202ENST00000398645 C10orf95Q9H7T3 257 aa11.18□□□□□ -0.62
KDM2A-202ENST00000398645 KRTAP4-16G5E9R7 235 aaPredicted RBP11.17□□□□□ -0.62
KDM2A-202ENST00000398645 HECTD1Q9ULT8 2610 aa11.15□□□□□ -0.62
KDM2A-202ENST00000398645 RANBP2P49792 3224 aaKnown RBP11.13□□□□□ -0.63
KDM2A-202ENST00000398645 CHD7Q9P2D1 2997 aa11.1□□□□□ -0.63
KDM2A-202ENST00000398645 LCE6AA0A183 80 aa11.08□□□□□ -0.64
KDM2A-202ENST00000398645 FLNAP21333 2647 aaKnown RBP11.06□□□□□ -0.64
KDM2A-202ENST00000398645 FLG2Q5D862 2391 aaPredicted RBP11.04□□□□□ -0.64
KDM2A-202ENST00000398645 SZT2Q5T011 3432 aa11.04□□□□□ -0.64
KDM2A-202ENST00000398645 LAMA3Q16787 3333 aa11.03□□□□□ -0.64
KDM2A-202ENST00000398645 ITPR3Q14573 2671 aa11.01□□□□□ -0.65
KDM2A-202ENST00000398645 UNC80Q8N2C7 3258 aa10.98□□□□□ -0.65
KDM2A-202ENST00000398645 REV3LO60673 3130 aa10.98□□□□□ -0.65
KDM2A-202ENST00000398645 EPG5Q9HCE0 2579 aa10.98□□□□□ -0.65
KDM2A-202ENST00000398645 CDH23Q9H251 3354 aa10.97□□□□□ -0.65
KDM2A-202ENST00000398645 ASB16-AS1Q495Z4 193 aa10.96□□□□□ -0.66
KDM2A-202ENST00000398645 KRTAP7-1Q8IUC3 87 aa10.95□□□□□ -0.66
KDM2A-202ENST00000398645 VPS13AQ96RL7 3174 aa10.94□□□□□ -0.66
KDM2A-202ENST00000398645 ATRQ13535 2644 aa10.9□□□□□ -0.67
KDM2A-202ENST00000398645 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
KDM2A-202ENST00000398645 A0A1B0GVY2 172 aa10.87□□□□□ -0.67
KDM2A-202ENST00000398645 PRUNE2Q8WUY3 3088 aa10.87□□□□□ -0.67
KDM2A-202ENST00000398645 MGAQ8IWI9 3026 aa10.86□□□□□ -0.67
KDM2A-202ENST00000398645 CHD6Q8TD26 2715 aa10.86□□□□□ -0.67
KDM2A-202ENST00000398645 AKAP13Q12802 2813 aa10.86□□□□□ -0.67
KDM2A-202ENST00000398645 COL6A3P12111 3177 aa10.83□□□□□ -0.68
KDM2A-202ENST00000398645 DMBT1Q9UGM3 2413 aaPredicted RBP10.81□□□□□ -0.68
KDM2A-202ENST00000398645 WDFY4Q6ZS81 3184 aa10.79□□□□□ -0.68
KDM2A-202ENST00000398645 TNP1P09430 55 aa10.77□□□□□ -0.68
KDM2A-202ENST00000398645 CFAP46Q8IYW2 2715 aa10.74□□□□□ -0.69
KDM2A-202ENST00000398645 NBEAL1Q6ZS30 2694 aa10.74□□□□□ -0.69
KDM2A-202ENST00000398645 HTTP42858 3142 aa10.72□□□□□ -0.69
KDM2A-202ENST00000398645 MAST4O15021 2626 aa10.72□□□□□ -0.69
KDM2A-202ENST00000398645 FRYQ5TBA9 3013 aa10.69□□□□□ -0.7
KDM2A-202ENST00000398645 Q6ZRN7 208 aaPredicted RBP10.68□□□□□ -0.7
KDM2A-202ENST00000398645 FLNBO75369 2602 aaKnown RBP10.67□□□□□ -0.7
KDM2A-202ENST00000398645 KRTAP10-8P60410 259 aa10.67□□□□□ -0.7
KDM2A-202ENST00000398645 CFAP47Q6ZTR5 3102 aa10.67□□□□□ -0.7
KDM2A-202ENST00000398645 VCANP13611 3396 aa10.66□□□□□ -0.7
KDM2A-202ENST00000398645 NBEAL2Q6ZNJ1 2754 aa10.64□□□□□ -0.71
KDM2A-202ENST00000398645 TEX15Q9BXT5 2789 aa10.62□□□□□ -0.71
KDM2A-202ENST00000398645 GCN1Q92616 2671 aaKnown RBP10.62□□□□□ -0.71
KDM2A-202ENST00000398645 KALRNO60229 2985 aa10.6□□□□□ -0.71
KDM2A-202ENST00000398645 KRTAP13-1Q8IUC0 172 aa10.56□□□□□ -0.72
KDM2A-202ENST00000398645 CHD9Q3L8U1 2897 aa10.53□□□□□ -0.72
KDM2A-202ENST00000398645 CENPEQ02224 2701 aa10.5□□□□□ -0.73
KDM2A-202ENST00000398645 HELZ2Q9BYK8 2649 aaKnown RBP10.5□□□□□ -0.73
KDM2A-202ENST00000398645 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
KDM2A-202ENST00000398645 SPEGQ15772 3267 aa10.49□□□□□ -0.73
KDM2A-202ENST00000398645 H0YAA0 97 aa10.49□□□□□ -0.73
KDM2A-202ENST00000398645 UNC79Q9P2D8 2635 aa10.47□□□□□ -0.73
KDM2A-202ENST00000398645 LAMA1P25391 3075 aa10.43□□□□□ -0.74
KDM2A-202ENST00000398645 TRANK1O15050 2925 aa10.39□□□□□ -0.75
KDM2A-202ENST00000398645 LRBAP50851 2863 aa10.39□□□□□ -0.75
KDM2A-202ENST00000398645 COL6A5A8TX70 2615 aa10.37□□□□□ -0.75
KDM2A-202ENST00000398645 STAB1Q9NY15 2570 aa10.36□□□□□ -0.75
KDM2A-202ENST00000398645 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
KDM2A-202ENST00000398645 CRYBG3Q68DQ2 2970 aa10.34□□□□□ -0.75
KDM2A-202ENST00000398645 SPTBN5Q9NRC6 3674 aaKnown RBP10.31□□□□□ -0.76
KDM2A-202ENST00000398645 USP34Q70CQ2 3546 aa10.3□□□□□ -0.76
KDM2A-202ENST00000398645 P0C880 135 aa10.3□□□□□ -0.76
KDM2A-202ENST00000398645 XP32Q5T750 250 aa10.3□□□□□ -0.76
KDM2A-202ENST00000398645 DMXL2Q8TDJ6 3036 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms