RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CDH23Q9H251 3354 aa8.75□□□□□ -1.01
PCDHA11-201ENST00000398640 KTN1-AS1Q86SY8 53 aa8.75□□□□□ -1.01
PCDHA11-201ENST00000398640 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
PCDHA11-201ENST00000398640 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
PCDHA11-201ENST00000398640 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
PCDHA11-201ENST00000398640 S4R3F8 94 aa8.73□□□□□ -1.01
PCDHA11-201ENST00000398640 A0A1B0GU33 70 aa8.73□□□□□ -1.01
PCDHA11-201ENST00000398640 DSPP15924 2871 aaKnown RBP8.72□□□□□ -1.01
PCDHA11-201ENST00000398640 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
PCDHA11-201ENST00000398640 Q8NDZ9 215 aa8.72□□□□□ -1.01
PCDHA11-201ENST00000398640 CENPEQ02224 2701 aa8.71□□□□□ -1.01
PCDHA11-201ENST00000398640 LUZP6Q538Z0 58 aa8.71□□□□□ -1.01
PCDHA11-201ENST00000398640 LCA10Q71F78 164 aa8.71□□□□□ -1.01
PCDHA11-201ENST00000398640 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
PCDHA11-201ENST00000398640 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
PCDHA11-201ENST00000398640 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
PCDHA11-201ENST00000398640 Q1T7F1 81 aa8.68□□□□□ -1.02
PCDHA11-201ENST00000398640 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
PCDHA11-201ENST00000398640 Q6ZR54 194 aa8.67□□□□□ -1.02
PCDHA11-201ENST00000398640 LINC00483Q53H64 154 aa8.66□□□□□ -1.02
PCDHA11-201ENST00000398640 WDFY4Q6ZS81 3184 aa8.65□□□□□ -1.03
PCDHA11-201ENST00000398640 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
PCDHA11-201ENST00000398640 SZT2Q5T011 3432 aa8.63□□□□□ -1.03
PCDHA11-201ENST00000398640 UNC80Q8N2C7 3258 aa8.62□□□□□ -1.03
PCDHA11-201ENST00000398640 SETXQ7Z333 2677 aaKnown RBP8.62□□□□□ -1.03
PCDHA11-201ENST00000398640 GCN1Q92616 2671 aaKnown RBP8.61□□□□□ -1.03
PCDHA11-201ENST00000398640 TEX15Q9BXT5 2789 aa8.6□□□□□ -1.03
PCDHA11-201ENST00000398640 SPRR1AP35321 89 aa8.6□□□□□ -1.03
PCDHA11-201ENST00000398640 COL6A5A8TX70 2615 aa8.6□□□□□ -1.03
PCDHA11-201ENST00000398640 CHD6Q8TD26 2715 aa8.59□□□□□ -1.03
PCDHA11-201ENST00000398640 SPINK7P58062 85 aa8.58□□□□□ -1.04
PCDHA11-201ENST00000398640 Q5W150 140 aa8.58□□□□□ -1.04
PCDHA11-201ENST00000398640 A0A0C4DFX4 3053 aa8.57□□□□□ -1.04
PCDHA11-201ENST00000398640 R4GN34 69 aa8.56□□□□□ -1.04
PCDHA11-201ENST00000398640 OXTP01178 125 aa8.55□□□□□ -1.04
PCDHA11-201ENST00000398640 KRTAP26-1Q6PEX3 210 aa8.54□□□□□ -1.04
PCDHA11-201ENST00000398640 XIRP2A4UGR9 3374 aa8.54□□□□□ -1.04
PCDHA11-201ENST00000398640 SPRR1BP22528 89 aa8.53□□□□□ -1.04
PCDHA11-201ENST00000398640 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
PCDHA11-201ENST00000398640 CYSTM1Q9H1C7 97 aa8.52□□□□□ -1.04
PCDHA11-201ENST00000398640 COL6A3P12111 3177 aa8.51□□□□□ -1.05
PCDHA11-201ENST00000398640 Q75L30 129 aa8.51□□□□□ -1.05
PCDHA11-201ENST00000398640 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
PCDHA11-201ENST00000398640 STAB1Q9NY15 2570 aa8.48□□□□□ -1.05
PCDHA11-201ENST00000398640 TRIOO75962 3097 aa8.47□□□□□ -1.05
PCDHA11-201ENST00000398640 LINC01558Q9Y6Z2 57 aa8.46□□□□□ -1.06
PCDHA11-201ENST00000398640 CFAP54Q96N23 3096 aa8.46□□□□□ -1.06
PCDHA11-201ENST00000398640 PRAC1Q96KF2 57 aa8.46□□□□□ -1.06
PCDHA11-201ENST00000398640 LAMA2P24043 3122 aaKnown RBP8.45□□□□□ -1.06
PCDHA11-201ENST00000398640 ITPR2Q14571 2701 aa8.44□□□□□ -1.06
PCDHA11-201ENST00000398640 PANO1I0J062 215 aa8.42□□□□□ -1.06
PCDHA11-201ENST00000398640 M0QZ58 72 aa8.42□□□□□ -1.06
PCDHA11-201ENST00000398640 SPTBN5Q9NRC6 3674 aaKnown RBP8.4□□□□□ -1.06
PCDHA11-201ENST00000398640 PLAC4Q8WY50 150 aa8.4□□□□□ -1.06
PCDHA11-201ENST00000398640 Q6ZRN7 208 aaPredicted RBP8.4□□□□□ -1.07
PCDHA11-201ENST00000398640 Q5XG85 94 aa8.39□□□□□ -1.07
PCDHA11-201ENST00000398640 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
PCDHA11-201ENST00000398640 KMT2BQ9UMN6 2715 aaPredicted RBP8.37□□□□□ -1.07
PCDHA11-201ENST00000398640 Q5VV11 94 aa8.34□□□□□ -1.07
PCDHA11-201ENST00000398640 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
PCDHA11-201ENST00000398640 A0A087X002 238 aa8.33□□□□□ -1.08
PCDHA11-201ENST00000398640 EYSQ5T1H1 3165 aa8.32□□□□□ -1.08
PCDHA11-201ENST00000398640 HIVEP1P15822 2718 aa8.32□□□□□ -1.08
PCDHA11-201ENST00000398640 RPL37P61927 97 aaKnown RBP8.3□□□□□ -1.08
PCDHA11-201ENST00000398640 VPS13AQ96RL7 3174 aa8.3□□□□□ -1.08
PCDHA11-201ENST00000398640 FRYQ5TBA9 3013 aa8.29□□□□□ -1.08
PCDHA11-201ENST00000398640 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
PCDHA11-201ENST00000398640 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
PCDHA11-201ENST00000398640 DMXL2Q8TDJ6 3036 aa8.27□□□□□ -1.09
PCDHA11-201ENST00000398640 NOTCH1P46531 2555 aa8.26□□□□□ -1.09
PCDHA11-201ENST00000398640 ROMO1P60602 79 aa8.26□□□□□ -1.09
PCDHA11-201ENST00000398640 FRYLO94915 3013 aa8.26□□□□□ -1.09
PCDHA11-201ENST00000398640 FLNCQ14315 2725 aa8.26□□□□□ -1.09
PCDHA11-201ENST00000398640 DNAH14Q0VDD8 3507 aa8.24□□□□□ -1.09
PCDHA11-201ENST00000398640 UTP20O75691 2785 aaKnown RBP8.24□□□□□ -1.09
PCDHA11-201ENST00000398640 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
PCDHA11-201ENST00000398640 LAMA1P25391 3075 aa8.23□□□□□ -1.09
PCDHA11-201ENST00000398640 ATMQ13315 3056 aa8.21□□□□□ -1.1
PCDHA11-201ENST00000398640 UBR5O95071 2799 aaPredicted RBP8.2□□□□□ -1.1
PCDHA11-201ENST00000398640 FLG2Q5D862 2391 aaPredicted RBP8.19□□□□□ -1.1
PCDHA11-201ENST00000398640 NOTCH2NLQ7Z3S9 236 aa8.19□□□□□ -1.1
PCDHA11-201ENST00000398640 A0A0A0MQY5 61 aa8.19□□□□□ -1.1
PCDHA11-201ENST00000398640 COL12A1Q99715 3063 aa8.19□□□□□ -1.1
PCDHA11-201ENST00000398640 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
PCDHA11-201ENST00000398640 ITPR1Q14643 2758 aa8.18□□□□□ -1.1
PCDHA11-201ENST00000398640 APCP25054 2843 aa8.18□□□□□ -1.1
PCDHA11-201ENST00000398640 CELSR3Q9NYQ7 3312 aa8.18□□□□□ -1.1
PCDHA11-201ENST00000398640 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
PCDHA11-201ENST00000398640 DMXL1Q9Y485 3027 aa8.16□□□□□ -1.1
PCDHA11-201ENST00000398640 VCANP13611 3396 aa8.15□□□□□ -1.1
PCDHA11-201ENST00000398640 NSD1Q96L73 2696 aaPredicted RBP8.15□□□□□ -1.11
PCDHA11-201ENST00000398640 KRTAP29-1A8MX34 341 aaPredicted RBP8.14□□□□□ -1.11
PCDHA11-201ENST00000398640 TENM4Q6N022 2769 aa8.13□□□□□ -1.11
PCDHA11-201ENST00000398640 USP34Q70CQ2 3546 aa8.12□□□□□ -1.11
PCDHA11-201ENST00000398640 RPS29P62273 56 aaKnown RBP8.11□□□□□ -1.11
PCDHA11-201ENST00000398640 MAP1AP78559 2803 aaPredicted RBP8.1□□□□□ -1.11
PCDHA11-201ENST00000398640 H3BS24 57 aa8.09□□□□□ -1.11
PCDHA11-201ENST00000398640 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.12
PCDHA11-201ENST00000398640 BOD1L1Q8NFC6 3051 aa8.06□□□□□ -1.12
PCDHA11-201ENST00000398640 REV3LO60673 3130 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms