RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 Q8N377 158 aa14.8□□□□□ -0.04
U2AF1-203ENST00000398137 SNCGO76070 127 aa14.79□□□□□ -0.04
U2AF1-203ENST00000398137 LAMTOR3Q9UHA4 124 aa14.79□□□□□ -0.04
U2AF1-203ENST00000398137 LINC00304Q8N9R0 145 aa14.78□□□□□ -0.04
U2AF1-203ENST00000398137 Q8NBF4 154 aa14.78□□□□□ -0.04
U2AF1-203ENST00000398137 NAA38Q9BRA0 125 aaKnown RBP14.77□□□□□ -0.05
U2AF1-203ENST00000398137 SMIM29Q86T20 159 aa14.76□□□□□ -0.05
U2AF1-203ENST00000398137 A0A1B0GX51 115 aa14.75□□□□□ -0.05
U2AF1-203ENST00000398137 SCGB1C2P0DMR2 95 aa14.74□□□□□ -0.05
U2AF1-203ENST00000398137 SSBP3-AS1Q7Z2R9 100 aa14.72□□□□□ -0.05
U2AF1-203ENST00000398137 PCP4L1A6NKN8 68 aa14.69□□□□□ -0.06
U2AF1-203ENST00000398137 SNHG12Q9BXW3 62 aa14.69□□□□□ -0.06
U2AF1-203ENST00000398137 PPDPFLQ8WWR9 84 aa14.68□□□□□ -0.06
U2AF1-203ENST00000398137 DNAL4O96015 105 aa14.67□□□□□ -0.06
U2AF1-203ENST00000398137 OCIAD2Q56VL3 154 aa14.67□□□□□ -0.06
U2AF1-203ENST00000398137 F8WEM9 126 aa14.66□□□□□ -0.06
U2AF1-203ENST00000398137 C4orf48Q5BLP8 95 aa14.65□□□□□ -0.06
U2AF1-203ENST00000398137 LST1O00453 97 aa14.64□□□□□ -0.07
U2AF1-203ENST00000398137 SPAG11AQ6PDA7 123 aa14.64□□□□□ -0.07
U2AF1-203ENST00000398137 H3BUT2 72 aa14.63□□□□□ -0.07
U2AF1-203ENST00000398137 PRR4Q16378 134 aa14.63□□□□□ -0.07
U2AF1-203ENST00000398137 TAX1BP3O14907 124 aa14.62□□□□□ -0.07
U2AF1-203ENST00000398137 TRACP01848 142 aa14.62□□□□□ -0.07
U2AF1-203ENST00000398137 ORMDL1Q9P0S3 153 aa14.6□□□□□ -0.07
U2AF1-203ENST00000398137 C9orf118A6NHY6 69 aa14.59□□□□□ -0.07
U2AF1-203ENST00000398137 FABP2P12104 132 aa14.59□□□□□ -0.07
U2AF1-203ENST00000398137 A0A0G2JQZ4 141 aa14.58□□□□□ -0.08
U2AF1-203ENST00000398137 TCL1BO95988 128 aa14.58□□□□□ -0.08
U2AF1-203ENST00000398137 GHRHP01286 108 aa14.58□□□□□ -0.08
U2AF1-203ENST00000398137 LYRM7Q5U5X0 104 aa14.58□□□□□ -0.08
U2AF1-203ENST00000398137 SPINK1P00995 79 aa14.56□□□□□ -0.08
U2AF1-203ENST00000398137 NDUFV3P56181 108 aaKnown RBP14.55□□□□□ -0.08
U2AF1-203ENST00000398137 ATXN8Q156A1 80 aa14.55□□□□□ -0.08
U2AF1-203ENST00000398137 HRCT1Q6UXD1 115 aa14.55□□□□□ -0.08
U2AF1-203ENST00000398137 IGLV8-61A0A075B6I0 122 aa14.54□□□□□ -0.08
U2AF1-203ENST00000398137 COL5A1-AS1Q5SY13 56 aa14.54□□□□□ -0.08
U2AF1-203ENST00000398137 MUC2Q02817 5179 aa14.52□□□□□ -0.09
U2AF1-203ENST00000398137 A0A1W2PPM0 123 aa14.51□□□□□ -0.09
U2AF1-203ENST00000398137 H3BQ85 93 aa14.51□□□□□ -0.09
U2AF1-203ENST00000398137 RETNLBQ9BQ08 111 aa14.51□□□□□ -0.09
U2AF1-203ENST00000398137 Q6JHZ5 121 aa14.5□□□□□ -0.09
U2AF1-203ENST00000398137 IGFL1Q6UW32 110 aa14.49□□□□□ -0.09
U2AF1-203ENST00000398137 TMEM256-PLSCR3K7ERE1 68 aa14.48□□□□□ -0.09
U2AF1-203ENST00000398137 RPS29P62273 56 aaKnown RBP14.48□□□□□ -0.09
U2AF1-203ENST00000398137 TRBV20-1A0A075B6N2 111 aa14.47□□□□□ -0.09
U2AF1-203ENST00000398137 CD164Q04900 197 aa14.47□□□□□ -0.09
U2AF1-203ENST00000398137 A0A1B0GV72 72 aa14.46□□□□□ -0.09
U2AF1-203ENST00000398137 H3BMG7 143 aa14.45□□□□□ -0.1
U2AF1-203ENST00000398137 BAALC-AS2P0C853 105 aa14.44□□□□□ -0.1
U2AF1-203ENST00000398137 UBE2V1Q13404 147 aa14.42□□□□□ -0.1
U2AF1-203ENST00000398137 LIMD2Q9BT23 127 aa14.41□□□□□ -0.1
U2AF1-203ENST00000398137 C9JAW5 83 aa14.39□□□□□ -0.11
U2AF1-203ENST00000398137 ANKRD29Q8N6D5 301 aa14.38□□□□□ -0.11
U2AF1-203ENST00000398137 SPCS1Q9Y6A9 102 aa14.37□□□□□ -0.11
U2AF1-203ENST00000398137 MUC17Q685J3 4493 aa14.34□□□□□ -0.11
U2AF1-203ENST00000398137 TRBV7-7A0A0K0K1E9 115 aa14.33□□□□□ -0.12
U2AF1-203ENST00000398137 MTURNQ8N3F0 131 aa14.31□□□□□ -0.12
U2AF1-203ENST00000398137 Q5XG85 94 aa14.3□□□□□ -0.12
U2AF1-203ENST00000398137 IGLV7-46A0A075B6I9 117 aa14.29□□□□□ -0.12
U2AF1-203ENST00000398137 FP248Q71RG6 208 aaPredicted RBP14.29□□□□□ -0.12
U2AF1-203ENST00000398137 TEN1Q86WV5 123 aa14.28□□□□□ -0.12
U2AF1-203ENST00000398137 RBM3P98179 157 aaKnown RBP14.27□□□□□ -0.13
U2AF1-203ENST00000398137 Q6Q795 121 aa14.27□□□□□ -0.13
U2AF1-203ENST00000398137 A0A1W2PNM2 257 aa14.26□□□□□ -0.13
U2AF1-203ENST00000398137 TPRXLQ17RH7 258 aa14.26□□□□□ -0.13
U2AF1-203ENST00000398137 TRBV7-4A0A0J9YYF1 115 aa14.24□□□□□ -0.13
U2AF1-203ENST00000398137 H3BT86 120 aa14.24□□□□□ -0.13
U2AF1-203ENST00000398137 K7EP34 96 aa14.24□□□□□ -0.13
U2AF1-203ENST00000398137 DSCR8Q96T75 97 aa14.23□□□□□ -0.13
U2AF1-203ENST00000398137 CCKP06307 115 aa14.21□□□□□ -0.13
U2AF1-203ENST00000398137 A0A087WSZ3 146 aa14.2□□□□□ -0.14
U2AF1-203ENST00000398137 JMJD7-PLA2G4BH0Y9G9 81 aa14.2□□□□□ -0.14
U2AF1-203ENST00000398137 C1orf195Q5TG92 126 aa14.2□□□□□ -0.14
U2AF1-203ENST00000398137 VPS25Q9BRG1 176 aa14.18□□□□□ -0.14
U2AF1-203ENST00000398137 CDIP1Q9H305 208 aa14.17□□□□□ -0.14
U2AF1-203ENST00000398137 FAT4Q6V0I7 4981 aa14.16□□□□□ -0.14
U2AF1-203ENST00000398137 ASB16-AS1Q495Z4 193 aa14.16□□□□□ -0.14
U2AF1-203ENST00000398137 SS18L2Q9UHA2 77 aa14.16□□□□□ -0.14
U2AF1-203ENST00000398137 C14orf132Q9NPU4 83 aa14.15□□□□□ -0.14
U2AF1-203ENST00000398137 OBSCN-AS1Q96MR7 158 aa14.14□□□□□ -0.15
U2AF1-203ENST00000398137 GTF2H5Q6ZYL4 71 aa14.13□□□□□ -0.15
U2AF1-203ENST00000398137 SMCPP49901 116 aaPredicted RBP14.12□□□□□ -0.15
U2AF1-203ENST00000398137 LOC110117498A0A087WWA1 95 aa14.11□□□□□ -0.15
U2AF1-203ENST00000398137 KRTAP13-3Q3SY46 172 aa14.11□□□□□ -0.15
U2AF1-203ENST00000398137 Q6ZQT0 140 aa14.11□□□□□ -0.15
U2AF1-203ENST00000398137 PRO0461Q9UI25 63 aa14.11□□□□□ -0.15
U2AF1-203ENST00000398137 LCE2AQ5TA79 106 aaPredicted RBP14.07□□□□□ -0.16
U2AF1-203ENST00000398137 A0A0U1RQV1 116 aa14.05□□□□□ -0.16
U2AF1-203ENST00000398137 PDE6GP18545 87 aa14.05□□□□□ -0.16
U2AF1-203ENST00000398137 Q96NJ1 140 aa14.01□□□□□ -0.17
U2AF1-203ENST00000398137 LCE2BO14633 110 aa13.99□□□□□ -0.17
U2AF1-203ENST00000398137 C9orf92A6NGG3 77 aa13.98□□□□□ -0.17
U2AF1-203ENST00000398137 C21orf62-AS1Q17RA5 79 aa13.95□□□□□ -0.18
U2AF1-203ENST00000398137 F8W1H4 67 aa13.94□□□□□ -0.18
U2AF1-203ENST00000398137 SIGMAR1Q99720 223 aa13.93□□□□□ -0.18
U2AF1-203ENST00000398137 A0A1B0GW54 56 aa13.91□□□□□ -0.18
U2AF1-203ENST00000398137 DEFB116Q30KQ4 102 aa13.91□□□□□ -0.18
U2AF1-203ENST00000398137 LINC00472Q9H8W2 130 aa13.91□□□□□ -0.18
U2AF1-203ENST00000398137 A0A1B0GV90 55 aa13.9□□□□□ -0.18
U2AF1-203ENST00000398137 KRTAP4-1Q9BYQ7 146 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms