RNA–Protein interactions for RNA: ENST00000396020.7

RPS29-202, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best) BASIC

Gene RPS29, Length 7,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-202ENST00000396020 CCDC168Q8NDH2 2452 aa4.33□□□□□ -1.72
RPS29-202ENST00000396020 TRANK1O15050 2925 aa4.33□□□□□ -1.72
RPS29-202ENST00000396020 LINC00472Q9H8W2 130 aa4.32□□□□□ -1.72
RPS29-202ENST00000396020 SEC61BP60468 96 aaKnown RBP4.31□□□□□ -1.72
RPS29-202ENST00000396020 Q6ZR54 194 aa4.31□□□□□ -1.72
RPS29-202ENST00000396020 ZNF462Q96JM2 2506 aa4.31□□□□□ -1.72
RPS29-202ENST00000396020 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
RPS29-202ENST00000396020 RPL37P61927 97 aaKnown RBP4.3□□□□□ -1.72
RPS29-202ENST00000396020 OXTP01178 125 aa4.29□□□□□ -1.72
RPS29-202ENST00000396020 LCE6AA0A183 80 aa4.29□□□□□ -1.72
RPS29-202ENST00000396020 SPRR1AP35321 89 aa4.29□□□□□ -1.72
RPS29-202ENST00000396020 ZFHX3Q15911 3703 aa4.28□□□□□ -1.72
RPS29-202ENST00000396020 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
RPS29-202ENST00000396020 FN1P02751 2386 aaKnown RBP4.26□□□□□ -1.73
RPS29-202ENST00000396020 ABCA12Q86UK0 2595 aa4.24□□□□□ -1.73
RPS29-202ENST00000396020 PANO1I0J062 215 aa4.24□□□□□ -1.73
RPS29-202ENST00000396020 SPTBN4Q9H254 2564 aa4.24□□□□□ -1.73
RPS29-202ENST00000396020 FREM2Q5SZK8 3169 aa4.24□□□□□ -1.73
RPS29-202ENST00000396020 DOPEY1Q5JWR5 2465 aa4.23□□□□□ -1.73
RPS29-202ENST00000396020 A8MU10 97 aa4.23□□□□□ -1.73
RPS29-202ENST00000396020 TRIOO75962 3097 aa4.23□□□□□ -1.73
RPS29-202ENST00000396020 A0A087X002 238 aa4.23□□□□□ -1.73
RPS29-202ENST00000396020 SPRR1BP22528 89 aa4.22□□□□□ -1.73
RPS29-202ENST00000396020 NOTCH2Q04721 2471 aa4.22□□□□□ -1.73
RPS29-202ENST00000396020 PKD1L2Q7Z442 2459 aa4.22□□□□□ -1.73
RPS29-202ENST00000396020 SPEGQ15772 3267 aa4.22□□□□□ -1.73
RPS29-202ENST00000396020 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
RPS29-202ENST00000396020 PIEZO1Q92508 2521 aa4.21□□□□□ -1.74
RPS29-202ENST00000396020 LAMA5O15230 3695 aa4.21□□□□□ -1.74
RPS29-202ENST00000396020 PRUNE2Q8WUY3 3088 aa4.21□□□□□ -1.74
RPS29-202ENST00000396020 LAMA2P24043 3122 aaKnown RBP4.19□□□□□ -1.74
RPS29-202ENST00000396020 A8MUU9 505 aa4.19□□□□□ -1.74
RPS29-202ENST00000396020 EYSQ5T1H1 3165 aa4.19□□□□□ -1.74
RPS29-202ENST00000396020 CSMD1Q96PZ7 3565 aa4.18□□□□□ -1.74
RPS29-202ENST00000396020 ZFHX4Q86UP3 3567 aa4.18□□□□□ -1.74
RPS29-202ENST00000396020 CACNA1AO00555 2505 aa4.18□□□□□ -1.74
RPS29-202ENST00000396020 AKAP9Q99996 3911 aa4.18□□□□□ -1.74
RPS29-202ENST00000396020 KRTAP11-1Q8IUC1 163 aa4.17□□□□□ -1.74
RPS29-202ENST00000396020 ZFYVE26Q68DK2 2539 aa4.17□□□□□ -1.74
RPS29-202ENST00000396020 DMDP11532 3685 aa4.17□□□□□ -1.74
RPS29-202ENST00000396020 C2CD3Q4AC94 2353 aa4.17□□□□□ -1.74
RPS29-202ENST00000396020 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
RPS29-202ENST00000396020 CHD8Q9HCK8 2581 aa4.16□□□□□ -1.74
RPS29-202ENST00000396020 FASNP49327 2511 aaKnown RBP4.16□□□□□ -1.74
RPS29-202ENST00000396020 TLN2Q9Y4G6 2542 aa4.16□□□□□ -1.74
RPS29-202ENST00000396020 TNRC18O15417 2968 aaPredicted RBP4.15□□□□□ -1.74
RPS29-202ENST00000396020 KRTAP16-1A8MUX0 517 aa4.15□□□□□ -1.75
RPS29-202ENST00000396020 POLQO75417 2590 aa4.15□□□□□ -1.75
RPS29-202ENST00000396020 F8P00451 2351 aa4.15□□□□□ -1.75
RPS29-202ENST00000396020 MYO18BQ8IUG5 2567 aa4.15□□□□□ -1.75
RPS29-202ENST00000396020 LAMA1P25391 3075 aa4.14□□□□□ -1.75
RPS29-202ENST00000396020 KRTAP4-16G5E9R7 235 aaPredicted RBP4.13□□□□□ -1.75
RPS29-202ENST00000396020 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
RPS29-202ENST00000396020 ACANP16112 2415 aa4.13□□□□□ -1.75
RPS29-202ENST00000396020 CFAP54Q96N23 3096 aa4.13□□□□□ -1.75
RPS29-202ENST00000396020 CEP295Q9C0D2 2601 aa4.13□□□□□ -1.75
RPS29-202ENST00000396020 USP9XQ93008 2570 aaPredicted RBP4.12□□□□□ -1.75
RPS29-202ENST00000396020 A0A0C4DFX4 3053 aa4.12□□□□□ -1.75
RPS29-202ENST00000396020 JMJD1CQ15652 2540 aa4.11□□□□□ -1.75
RPS29-202ENST00000396020 AKAP13Q12802 2813 aa4.11□□□□□ -1.75
RPS29-202ENST00000396020 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
RPS29-202ENST00000396020 MYO9AB2RTY4 2548 aa4.1□□□□□ -1.75
RPS29-202ENST00000396020 NBPF19A0A087WUL8 3843 aa4.1□□□□□ -1.75
RPS29-202ENST00000396020 SPENQ96T58 3664 aaKnown RBP4.1□□□□□ -1.75
RPS29-202ENST00000396020 WDFY4Q6ZS81 3184 aa4.1□□□□□ -1.75
RPS29-202ENST00000396020 Q6ZRN7 208 aaPredicted RBP4.09□□□□□ -1.75
RPS29-202ENST00000396020 A6NN06 94 aa4.09□□□□□ -1.76
RPS29-202ENST00000396020 MGAQ8IWI9 3026 aa4.08□□□□□ -1.76
RPS29-202ENST00000396020 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
RPS29-202ENST00000396020 A0A1B0GVY2 172 aa4.07□□□□□ -1.76
RPS29-202ENST00000396020 RELNP78509 3460 aa4.07□□□□□ -1.76
RPS29-202ENST00000396020 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
RPS29-202ENST00000396020 PRRC2CQ9Y520 2896 aaKnown RBP4.06□□□□□ -1.76
RPS29-202ENST00000396020 FLNAP21333 2647 aaKnown RBP4.06□□□□□ -1.76
RPS29-202ENST00000396020 ITPR3Q14573 2671 aa4.06□□□□□ -1.76
RPS29-202ENST00000396020 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
RPS29-202ENST00000396020 VPS13AQ96RL7 3174 aa4.04□□□□□ -1.76
RPS29-202ENST00000396020 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
RPS29-202ENST00000396020 KRTAP21-3Q3LHN1 58 aa4.03□□□□□ -1.76
RPS29-202ENST00000396020 LOC400499M0QZD8 3231 aa4.03□□□□□ -1.76
RPS29-202ENST00000396020 USP9YO00507 2555 aaPredicted RBP4.03□□□□□ -1.76
RPS29-202ENST00000396020 BSNQ9UPA5 3926 aa4.03□□□□□ -1.76
RPS29-202ENST00000396020 KRTAP13-2Q52LG2 175 aa4.03□□□□□ -1.76
RPS29-202ENST00000396020 KMT2BQ9UMN6 2715 aaPredicted RBP4.02□□□□□ -1.77
RPS29-202ENST00000396020 VPS13CQ709C8 3753 aa4.02□□□□□ -1.77
RPS29-202ENST00000396020 TNP1P09430 55 aa4.02□□□□□ -1.77
RPS29-202ENST00000396020 MTORP42345 2549 aa4.01□□□□□ -1.77
RPS29-202ENST00000396020 SMG1Q96Q15 3661 aaKnown RBP4.01□□□□□ -1.77
RPS29-202ENST00000396020 LRBAP50851 2863 aa3.99□□□□□ -1.77
RPS29-202ENST00000396020 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
RPS29-202ENST00000396020 SETD2Q9BYW2 2564 aaPredicted RBP3.98□□□□□ -1.77
RPS29-202ENST00000396020 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
RPS29-202ENST00000396020 CFAP47Q6ZTR5 3102 aa3.94□□□□□ -1.78
RPS29-202ENST00000396020 CFAP46Q8IYW2 2715 aa3.94□□□□□ -1.78
RPS29-202ENST00000396020 HECTD1Q9ULT8 2610 aa3.93□□□□□ -1.78
RPS29-202ENST00000396020 FRYQ5TBA9 3013 aa3.93□□□□□ -1.78
RPS29-202ENST00000396020 HELZ2Q9BYK8 2649 aaKnown RBP3.92□□□□□ -1.78
RPS29-202ENST00000396020 ZNF292O60281 2723 aa3.91□□□□□ -1.78
RPS29-202ENST00000396020 FRYLO94915 3013 aa3.9□□□□□ -1.78
RPS29-202ENST00000396020 ZZEF1O43149 2961 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms