RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 KRTAP10-3P60369 221 aa4.61□□□□□ -1.67
SYNE2-205ENST00000394768 LINC01558Q9Y6Z2 57 aa4.61□□□□□ -1.67
SYNE2-205ENST00000394768 TEP1Q99973 2627 aaKnown RBP4.61□□□□□ -1.67
SYNE2-205ENST00000394768 A0A0G2JQZ4 141 aa4.61□□□□□ -1.67
SYNE2-205ENST00000394768 ROMO1P60602 79 aa4.61□□□□□ -1.67
SYNE2-205ENST00000394768 Q5VSD8 79 aa4.61□□□□□ -1.67
SYNE2-205ENST00000394768 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
SYNE2-205ENST00000394768 ASB16-AS1Q495Z4 193 aa4.59□□□□□ -1.67
SYNE2-205ENST00000394768 COL6A5A8TX70 2615 aa4.59□□□□□ -1.67
SYNE2-205ENST00000394768 CHD6Q8TD26 2715 aa4.59□□□□□ -1.67
SYNE2-205ENST00000394768 M0QZ58 72 aa4.58□□□□□ -1.68
SYNE2-205ENST00000394768 Q8N9P0 234 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-205ENST00000394768 EIF4EBP3O60516 100 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-205ENST00000394768 MMP24-AS1A0A0U1RRL7 71 aa4.57□□□□□ -1.68
SYNE2-205ENST00000394768 SPRR1BP22528 89 aa4.57□□□□□ -1.68
SYNE2-205ENST00000394768 Q5W150 140 aa4.56□□□□□ -1.68
SYNE2-205ENST00000394768 GCN1Q92616 2671 aaKnown RBP4.56□□□□□ -1.68
SYNE2-205ENST00000394768 SPRR1AP35321 89 aa4.55□□□□□ -1.68
SYNE2-205ENST00000394768 EP400Q96L91 3159 aa4.54□□□□□ -1.68
SYNE2-205ENST00000394768 LCE6AA0A183 80 aa4.54□□□□□ -1.68
SYNE2-205ENST00000394768 BAHCC1Q9P281 2608 aa4.54□□□□□ -1.68
SYNE2-205ENST00000394768 KRTAP1-3Q8IUG1 177 aa4.53□□□□□ -1.68
SYNE2-205ENST00000394768 ITPR2Q14571 2701 aa4.52□□□□□ -1.69
SYNE2-205ENST00000394768 LINC00472Q9H8W2 130 aa4.52□□□□□ -1.69
SYNE2-205ENST00000394768 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
SYNE2-205ENST00000394768 KRTAP1-1Q07627 177 aa4.51□□□□□ -1.69
SYNE2-205ENST00000394768 PANO1I0J062 215 aa4.49□□□□□ -1.69
SYNE2-205ENST00000394768 ADM2Q7Z4H4 148 aa4.47□□□□□ -1.69
SYNE2-205ENST00000394768 NSD1Q96L73 2696 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-205ENST00000394768 ZNF292O60281 2723 aa4.46□□□□□ -1.7
SYNE2-205ENST00000394768 Q5VV11 94 aa4.45□□□□□ -1.7
SYNE2-205ENST00000394768 Q6ZR54 194 aa4.45□□□□□ -1.7
SYNE2-205ENST00000394768 H3BS24 57 aa4.44□□□□□ -1.7
SYNE2-205ENST00000394768 IGSF10Q6WRI0 2623 aa4.43□□□□□ -1.7
SYNE2-205ENST00000394768 KRTAP26-1Q6PEX3 210 aa4.4□□□□□ -1.71
SYNE2-205ENST00000394768 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
SYNE2-205ENST00000394768 MAP1AP78559 2803 aaPredicted RBP4.38□□□□□ -1.71
SYNE2-205ENST00000394768 C20orf166-AS1Q96NR2 134 aa4.37□□□□□ -1.71
SYNE2-205ENST00000394768 KRTAP10-1P60331 282 aa4.37□□□□□ -1.71
SYNE2-205ENST00000394768 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
SYNE2-205ENST00000394768 A8MUU9 505 aa4.36□□□□□ -1.71
SYNE2-205ENST00000394768 Q8NDZ9 215 aa4.36□□□□□ -1.71
SYNE2-205ENST00000394768 TNP1P09430 55 aa4.35□□□□□ -1.71
SYNE2-205ENST00000394768 CEP350Q5VT06 3117 aa4.35□□□□□ -1.71
SYNE2-205ENST00000394768 SPATA8Q6RVD6 105 aa4.34□□□□□ -1.71
SYNE2-205ENST00000394768 SRCAPQ6ZRS2 3230 aa4.34□□□□□ -1.71
SYNE2-205ENST00000394768 Q5XG85 94 aa4.34□□□□□ -1.71
SYNE2-205ENST00000394768 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
SYNE2-205ENST00000394768 APCP25054 2843 aa4.32□□□□□ -1.72
SYNE2-205ENST00000394768 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
SYNE2-205ENST00000394768 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
SYNE2-205ENST00000394768 A0A087X002 238 aa4.27□□□□□ -1.73
SYNE2-205ENST00000394768 KRTAP4-16G5E9R7 235 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-205ENST00000394768 KRTAP21-3Q3LHN1 58 aa4.27□□□□□ -1.73
SYNE2-205ENST00000394768 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
SYNE2-205ENST00000394768 UTP20O75691 2785 aaKnown RBP4.26□□□□□ -1.73
SYNE2-205ENST00000394768 KRTAP29-1A8MX34 341 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-205ENST00000394768 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
SYNE2-205ENST00000394768 NBEAL2Q6ZNJ1 2754 aa4.24□□□□□ -1.73
SYNE2-205ENST00000394768 UBR5O95071 2799 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-205ENST00000394768 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
SYNE2-205ENST00000394768 Q6ZRN7 208 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-205ENST00000394768 FLNCQ14315 2725 aa4.19□□□□□ -1.74
SYNE2-205ENST00000394768 C5orf42Q9H799 3197 aa4.19□□□□□ -1.74
SYNE2-205ENST00000394768 DNAH12Q6ZR08 3092 aa4.18□□□□□ -1.74
SYNE2-205ENST00000394768 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
SYNE2-205ENST00000394768 CYSTM1Q9H1C7 97 aa4.16□□□□□ -1.74
SYNE2-205ENST00000394768 ITPR1Q14643 2758 aa4.16□□□□□ -1.74
SYNE2-205ENST00000394768 A0A0C4DFX4 3053 aa4.13□□□□□ -1.75
SYNE2-205ENST00000394768 PCNTO95613 3336 aa4.13□□□□□ -1.75
SYNE2-205ENST00000394768 DSPP15924 2871 aaKnown RBP4.12□□□□□ -1.75
SYNE2-205ENST00000394768 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
SYNE2-205ENST00000394768 A6NN06 94 aa4.12□□□□□ -1.75
SYNE2-205ENST00000394768 P0C880 135 aa4.12□□□□□ -1.75
SYNE2-205ENST00000394768 HIVEP1P15822 2718 aa4.11□□□□□ -1.75
SYNE2-205ENST00000394768 KRTAP10-8P60410 259 aa4.11□□□□□ -1.75
SYNE2-205ENST00000394768 MGAQ8IWI9 3026 aa4.11□□□□□ -1.75
SYNE2-205ENST00000394768 CHD9Q3L8U1 2897 aa4.11□□□□□ -1.75
SYNE2-205ENST00000394768 A8MU10 97 aa4.09□□□□□ -1.75
SYNE2-205ENST00000394768 FRYQ5TBA9 3013 aa4.09□□□□□ -1.76
SYNE2-205ENST00000394768 TENM1Q9UKZ4 2725 aa4.09□□□□□ -1.76
SYNE2-205ENST00000394768 KRTAP13-1Q8IUC0 172 aa4.08□□□□□ -1.76
SYNE2-205ENST00000394768 TPRXLQ17RH7 258 aa4.08□□□□□ -1.76
SYNE2-205ENST00000394768 GOLGB1Q14789 3259 aaKnown RBP4.08□□□□□ -1.76
SYNE2-205ENST00000394768 CFAP54Q96N23 3096 aa4.08□□□□□ -1.76
SYNE2-205ENST00000394768 KRTAP13-2Q52LG2 175 aa4.08□□□□□ -1.76
SYNE2-205ENST00000394768 TENM3Q9P273 2699 aa4.07□□□□□ -1.76
SYNE2-205ENST00000394768 KRTAP11-1Q8IUC1 163 aa4.07□□□□□ -1.76
SYNE2-205ENST00000394768 NIPBLQ6KC79 2804 aaeCLIP4.06□□□□□ -1.76
SYNE2-205ENST00000394768 TRANK1O15050 2925 aa4.06□□□□□ -1.76
SYNE2-205ENST00000394768 LAMA2P24043 3122 aaKnown RBP4.06□□□□□ -1.76
SYNE2-205ENST00000394768 KALRNO60229 2985 aa4.04□□□□□ -1.76
SYNE2-205ENST00000394768 NF1P21359 2839 aa4.02□□□□□ -1.77
SYNE2-205ENST00000394768 XP32Q5T750 250 aa4.01□□□□□ -1.77
SYNE2-205ENST00000394768 TENM4Q6N022 2769 aa4□□□□□ -1.77
SYNE2-205ENST00000394768 UTRNP46939 3433 aa4□□□□□ -1.77
SYNE2-205ENST00000394768 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
SYNE2-205ENST00000394768 CRYBG3Q68DQ2 2970 aa3.99□□□□□ -1.77
SYNE2-205ENST00000394768 FRYLO94915 3013 aa3.98□□□□□ -1.77
SYNE2-205ENST00000394768 LRBAP50851 2863 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms