RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
GTDC1-204ENST00000392869 PANO1I0J062 215 aa3.72□□□□□ -1.81
GTDC1-204ENST00000392869 A6NN06 94 aa3.72□□□□□ -1.81
GTDC1-204ENST00000392869 UTRNP46939 3433 aa3.72□□□□□ -1.81
GTDC1-204ENST00000392869 A0A096LNT2 108 aa3.72□□□□□ -1.81
GTDC1-204ENST00000392869 USP9YO00507 2555 aaPredicted RBP3.71□□□□□ -1.82
GTDC1-204ENST00000392869 LCE6AA0A183 80 aa3.71□□□□□ -1.82
GTDC1-204ENST00000392869 NOTCH2NLQ7Z3S9 236 aa3.7□□□□□ -1.82
GTDC1-204ENST00000392869 KRTAP26-1Q6PEX3 210 aa3.69□□□□□ -1.82
GTDC1-204ENST00000392869 KRTAP10-3P60369 221 aa3.68□□□□□ -1.82
GTDC1-204ENST00000392869 SMR3BP02814 79 aaPredicted RBP3.67□□□□□ -1.82
GTDC1-204ENST00000392869 EPG5Q9HCE0 2579 aa3.67□□□□□ -1.82
GTDC1-204ENST00000392869 KRTAP29-1A8MX34 341 aaPredicted RBP3.67□□□□□ -1.82
GTDC1-204ENST00000392869 A0A0G2JQZ4 141 aa3.65□□□□□ -1.82
GTDC1-204ENST00000392869 C20orf166-AS1Q96NR2 134 aa3.65□□□□□ -1.83
GTDC1-204ENST00000392869 POLQO75417 2590 aa3.64□□□□□ -1.83
GTDC1-204ENST00000392869 TNP1P09430 55 aa3.64□□□□□ -1.83
GTDC1-204ENST00000392869 ADM2Q7Z4H4 148 aa3.62□□□□□ -1.83
GTDC1-204ENST00000392869 CASC10Q5T4H9 136 aa3.62□□□□□ -1.83
GTDC1-204ENST00000392869 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
GTDC1-204ENST00000392869 CYSTM1Q9H1C7 97 aa3.61□□□□□ -1.83
GTDC1-204ENST00000392869 PRRC2CQ9Y520 2896 aaKnown RBP3.61□□□□□ -1.83
GTDC1-204ENST00000392869 FLNBO75369 2602 aaKnown RBP3.61□□□□□ -1.83
GTDC1-204ENST00000392869 Q8NDZ9 215 aa3.61□□□□□ -1.83
GTDC1-204ENST00000392869 KRTAP4-16G5E9R7 235 aaPredicted RBP3.61□□□□□ -1.83
GTDC1-204ENST00000392869 DNAH12Q6ZR08 3092 aa3.6□□□□□ -1.83
GTDC1-204ENST00000392869 KRTAP1-3Q8IUG1 177 aa3.6□□□□□ -1.83
GTDC1-204ENST00000392869 BPTFQ12830 3046 aa3.59□□□□□ -1.84
GTDC1-204ENST00000392869 A8MUU9 505 aa3.57□□□□□ -1.84
GTDC1-204ENST00000392869 KRTAP1-1Q07627 177 aa3.57□□□□□ -1.84
GTDC1-204ENST00000392869 KRTAP11-1Q8IUC1 163 aa3.55□□□□□ -1.84
GTDC1-204ENST00000392869 USP24Q9UPU5 2620 aa3.54□□□□□ -1.84
GTDC1-204ENST00000392869 FLNAP21333 2647 aaKnown RBP3.54□□□□□ -1.84
GTDC1-204ENST00000392869 KMT2BQ9UMN6 2715 aaPredicted RBP3.53□□□□□ -1.84
GTDC1-204ENST00000392869 DCHS1Q96JQ0 3298 aa3.53□□□□□ -1.84
GTDC1-204ENST00000392869 HELZ2Q9BYK8 2649 aaKnown RBP3.51□□□□□ -1.85
GTDC1-204ENST00000392869 SPEGQ15772 3267 aa3.51□□□□□ -1.85
GTDC1-204ENST00000392869 Q5VSD8 79 aa3.51□□□□□ -1.85
GTDC1-204ENST00000392869 ITPR3Q14573 2671 aa3.5□□□□□ -1.85
GTDC1-204ENST00000392869 CENPEQ02224 2701 aa3.5□□□□□ -1.85
GTDC1-204ENST00000392869 COL6A3P12111 3177 aa3.5□□□□□ -1.85
GTDC1-204ENST00000392869 C5orf42Q9H799 3197 aa3.5□□□□□ -1.85
GTDC1-204ENST00000392869 HTTP42858 3142 aa3.49□□□□□ -1.85
GTDC1-204ENST00000392869 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
GTDC1-204ENST00000392869 RANBP2P49792 3224 aaKnown RBP3.46□□□□□ -1.85
GTDC1-204ENST00000392869 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
GTDC1-204ENST00000392869 DMBT1Q9UGM3 2413 aaPredicted RBP3.46□□□□□ -1.86
GTDC1-204ENST00000392869 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
GTDC1-204ENST00000392869 SPTBN5Q9NRC6 3674 aaKnown RBP3.46□□□□□ -1.86
GTDC1-204ENST00000392869 HECTD1Q9ULT8 2610 aa3.45□□□□□ -1.86
GTDC1-204ENST00000392869 MGAM2Q2M2H8 2515 aa3.45□□□□□ -1.86
GTDC1-204ENST00000392869 ATRQ13535 2644 aa3.44□□□□□ -1.86
GTDC1-204ENST00000392869 MAST4O15021 2626 aa3.44□□□□□ -1.86
GTDC1-204ENST00000392869 P0C880 135 aa3.44□□□□□ -1.86
GTDC1-204ENST00000392869 XIRP2A4UGR9 3374 aa3.43□□□□□ -1.86
GTDC1-204ENST00000392869 BRCA2P51587 3418 aa3.43□□□□□ -1.86
GTDC1-204ENST00000392869 CFAP46Q8IYW2 2715 aa3.43□□□□□ -1.86
GTDC1-204ENST00000392869 NBEAL1Q6ZS30 2694 aa3.42□□□□□ -1.86
GTDC1-204ENST00000392869 GCN1Q92616 2671 aaKnown RBP3.42□□□□□ -1.86
GTDC1-204ENST00000392869 CDH23Q9H251 3354 aa3.41□□□□□ -1.86
GTDC1-204ENST00000392869 LAMA3Q16787 3333 aa3.4□□□□□ -1.86
GTDC1-204ENST00000392869 KRTAP13-1Q8IUC0 172 aa3.4□□□□□ -1.87
GTDC1-204ENST00000392869 KRTAP1-5Q9BYS1 174 aa3.39□□□□□ -1.87
GTDC1-204ENST00000392869 KRTAP10-1P60331 282 aa3.38□□□□□ -1.87
GTDC1-204ENST00000392869 A8MU10 97 aa3.37□□□□□ -1.87
GTDC1-204ENST00000392869 CEP350Q5VT06 3117 aa3.37□□□□□ -1.87
GTDC1-204ENST00000392869 KRTAP10-2P60368 255 aa3.36□□□□□ -1.87
GTDC1-204ENST00000392869 BAHCC1Q9P281 2608 aa3.36□□□□□ -1.87
GTDC1-204ENST00000392869 UNC80Q8N2C7 3258 aa3.35□□□□□ -1.87
GTDC1-204ENST00000392869 AKAP13Q12802 2813 aa3.35□□□□□ -1.87
GTDC1-204ENST00000392869 ZNF292O60281 2723 aa3.35□□□□□ -1.87
GTDC1-204ENST00000392869 CHD7Q9P2D1 2997 aa3.35□□□□□ -1.87
GTDC1-204ENST00000392869 TRANK1O15050 2925 aa3.34□□□□□ -1.88
GTDC1-204ENST00000392869 INE1O15225 51 aa3.34□□□□□ -1.88
GTDC1-204ENST00000392869 TEX15Q9BXT5 2789 aa3.33□□□□□ -1.88
GTDC1-204ENST00000392869 CHD6Q8TD26 2715 aa3.33□□□□□ -1.88
GTDC1-204ENST00000392869 NOTCH1P46531 2555 aa3.32□□□□□ -1.88
GTDC1-204ENST00000392869 SETXQ7Z333 2677 aaKnown RBP3.32□□□□□ -1.88
GTDC1-204ENST00000392869 WDFY3Q8IZQ1 3526 aa3.31□□□□□ -1.88
GTDC1-204ENST00000392869 CFAP54Q96N23 3096 aa3.3□□□□□ -1.88
GTDC1-204ENST00000392869 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
GTDC1-204ENST00000392869 DNAH14Q0VDD8 3507 aa3.3□□□□□ -1.88
GTDC1-204ENST00000392869 TEP1Q99973 2627 aaKnown RBP3.3□□□□□ -1.88
GTDC1-204ENST00000392869 ITPR2Q14571 2701 aa3.29□□□□□ -1.88
GTDC1-204ENST00000392869 H0YAA0 97 aa3.29□□□□□ -1.88
GTDC1-204ENST00000392869 STAB1Q9NY15 2570 aa3.28□□□□□ -1.88
GTDC1-204ENST00000392869 KRTAP21-3Q3LHN1 58 aa3.27□□□□□ -1.89
GTDC1-204ENST00000392869 MKI67P46013 3256 aaKnown RBP3.27□□□□□ -1.89
GTDC1-204ENST00000392869 UNC79Q9P2D8 2635 aa3.27□□□□□ -1.89
GTDC1-204ENST00000392869 CHD9Q3L8U1 2897 aa3.26□□□□□ -1.89
GTDC1-204ENST00000392869 MYO15AQ9UKN7 3530 aa3.26□□□□□ -1.89
GTDC1-204ENST00000392869 KRTAP13-2Q52LG2 175 aa3.26□□□□□ -1.89
GTDC1-204ENST00000392869 KRTAP10-8P60410 259 aa3.26□□□□□ -1.89
GTDC1-204ENST00000392869 MGAQ8IWI9 3026 aa3.26□□□□□ -1.89
GTDC1-204ENST00000392869 TRIOO75962 3097 aa3.24□□□□□ -1.89
GTDC1-204ENST00000392869 LAMA2P24043 3122 aaKnown RBP3.24□□□□□ -1.89
GTDC1-204ENST00000392869 COL6A5A8TX70 2615 aa3.24□□□□□ -1.89
GTDC1-204ENST00000392869 A0A0C4DFX4 3053 aa3.23□□□□□ -1.89
GTDC1-204ENST00000392869 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
GTDC1-204ENST00000392869 RELNP78509 3460 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms