RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PZPP20742 1482 aa-1.41□□□□□ -2.63
SNORD28B-201ENST00000390993 COL5A1-AS1Q5SY13 56 aa-1.41□□□□□ -2.64
SNORD28B-201ENST00000390993 GNG8Q9UK08 70 aa-1.41□□□□□ -2.64
SNORD28B-201ENST00000390993 TRRAPQ9Y4A5 3859 aa-1.41□□□□□ -2.64
SNORD28B-201ENST00000390993 TIAM2Q8IVF5 1701 aa-1.41□□□□□ -2.64
SNORD28B-201ENST00000390993 MYO9AB2RTY4 2548 aa-1.41□□□□□ -2.64
SNORD28B-201ENST00000390993 RGPD3A6NKT7 1758 aaPredicted RBP-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 RGPD4Q7Z3J3 1758 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 EIF4G3O43432 1585 aaKnown RBP-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 NRXN1Q9ULB1 1477 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 ABCA3Q99758 1704 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 LYNX1G3V0Z9 82 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 HMGN1P05114 100 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 IAPPP10997 89 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 SMIM11AP58511 58 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 WFDC9Q8NEX5 89 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 TMEM203Q969S6 136 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 CEP295Q9C0D2 2601 aa-1.42□□□□□ -2.64
SNORD28B-201ENST00000390993 TNP1P09430 55 aa-1.43□□□□□ -2.64
SNORD28B-201ENST00000390993 DEFB130BP0DP73 79 aa-1.43□□□□□ -2.64
SNORD28B-201ENST00000390993 DEFB130AP0DP74 79 aa-1.43□□□□□ -2.64
SNORD28B-201ENST00000390993 WIZO95785 1651 aa-1.43□□□□□ -2.64
SNORD28B-201ENST00000390993 CSMD1Q96PZ7 3565 aa-1.43□□□□□ -2.64
SNORD28B-201ENST00000390993 MYH4Q9Y623 1939 aa-1.44□□□□□ -2.64
SNORD28B-201ENST00000390993 MMP24-AS1A0A0U1RRL7 71 aa-1.44□□□□□ -2.64
SNORD28B-201ENST00000390993 A0A1B0GV90 55 aa-1.44□□□□□ -2.64
SNORD28B-201ENST00000390993 DLEU1O43261 78 aa-1.44□□□□□ -2.64
SNORD28B-201ENST00000390993 MT1EP04732 61 aa-1.44□□□□□ -2.64
SNORD28B-201ENST00000390993 COL6A5A8TX70 2615 aa-1.44□□□□□ -2.64
SNORD28B-201ENST00000390993 SMR3BP02814 79 aaPredicted RBP-1.45□□□□□ -2.64
SNORD28B-201ENST00000390993 LINC00032P0C843 101 aa-1.45□□□□□ -2.64
SNORD28B-201ENST00000390993 FAUP35544 74 aaKnown RBP-1.45□□□□□ -2.64
SNORD28B-201ENST00000390993 DNAH17Q9UFH2 4485 aa-1.45□□□□□ -2.64
SNORD28B-201ENST00000390993 ATP7BP35670 1465 aa-1.45□□□□□ -2.64
SNORD28B-201ENST00000390993 EYSQ5T1H1 3165 aa-1.45□□□□□ -2.64
SNORD28B-201ENST00000390993 PLIN4Q96Q06 1357 aa-1.46□□□□□ -2.64
SNORD28B-201ENST00000390993 NWD1Q149M9 1564 aa-1.46□□□□□ -2.64
SNORD28B-201ENST00000390993 NESP48681 1621 aa-1.46□□□□□ -2.64
SNORD28B-201ENST00000390993 TRAV21A0A0B4J279 112 aa-1.46□□□□□ -2.64
SNORD28B-201ENST00000390993 NDUFB1O75438 58 aa-1.46□□□□□ -2.64
SNORD28B-201ENST00000390993 EPRSP07814 1512 aaKnown RBP-1.46□□□□□ -2.64
SNORD28B-201ENST00000390993 SPENQ96T58 3664 aaKnown RBP-1.46□□□□□ -2.64
SNORD28B-201ENST00000390993 SPTAN1Q13813 2472 aaKnown RBP-1.47□□□□□ -2.64
SNORD28B-201ENST00000390993 CLTCQ00610 1675 aaKnown RBP-1.47□□□□□ -2.64
SNORD28B-201ENST00000390993 EFCAB10A6NFE3 127 aa-1.47□□□□□ -2.64
SNORD28B-201ENST00000390993 HMGN2P05204 90 aaKnown RBP-1.47□□□□□ -2.64
SNORD28B-201ENST00000390993 SUPT6HQ7KZ85 1726 aaKnown RBP-1.47□□□□□ -2.64
SNORD28B-201ENST00000390993 SMG1Q96Q15 3661 aaKnown RBP-1.47□□□□□ -2.64
SNORD28B-201ENST00000390993 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.47□□□□□ -2.65
SNORD28B-201ENST00000390993 CFAP46Q8IYW2 2715 aa-1.48□□□□□ -2.65
SNORD28B-201ENST00000390993 LCE6AA0A183 80 aa-1.48□□□□□ -2.65
SNORD28B-201ENST00000390993 C20orf202A1L168 122 aa-1.48□□□□□ -2.65
SNORD28B-201ENST00000390993 MT-ATP8P03928 68 aa-1.48□□□□□ -2.65
SNORD28B-201ENST00000390993 ACYP1P07311 99 aa-1.48□□□□□ -2.65
SNORD28B-201ENST00000390993 PEA15Q15121 130 aa-1.48□□□□□ -2.65
SNORD28B-201ENST00000390993 MT1LQ93083 61 aa-1.48□□□□□ -2.65
SNORD28B-201ENST00000390993 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.48□□□□□ -2.65
SNORD28B-201ENST00000390993 UNC13AQ9UPW8 1703 aa-1.49□□□□□ -2.65
SNORD28B-201ENST00000390993 FYCO1Q9BQS8 1478 aa-1.49□□□□□ -2.65
SNORD28B-201ENST00000390993 RGPD1P0DJD0 1748 aa-1.49□□□□□ -2.65
SNORD28B-201ENST00000390993 FANCAO15360 1455 aa-1.5□□□□□ -2.65
SNORD28B-201ENST00000390993 IFI27P40305 119 aaPredicted RBP-1.5□□□□□ -2.65
SNORD28B-201ENST00000390993 CDC42BPAQ5VT25 1732 aa-1.5□□□□□ -2.65
SNORD28B-201ENST00000390993 TEX14Q8IWB6 1497 aa-1.5□□□□□ -2.65
SNORD28B-201ENST00000390993 ADGRG4Q8IZF6 3080 aa-1.51□□□□□ -2.65
SNORD28B-201ENST00000390993 DNAH5Q8TE73 4624 aa-1.51□□□□□ -2.65
SNORD28B-201ENST00000390993 LTN1O94822 1766 aa-1.51□□□□□ -2.65
SNORD28B-201ENST00000390993 S100PP25815 95 aa-1.51□□□□□ -2.65
SNORD28B-201ENST00000390993 KRTAP8-1Q8IUC2 63 aa-1.51□□□□□ -2.65
SNORD28B-201ENST00000390993 POLR1AO95602 1720 aaPredicted RBP-1.52□□□□□ -2.65
SNORD28B-201ENST00000390993 S100A10P60903 97 aa-1.52□□□□□ -2.65
SNORD28B-201ENST00000390993 C2orf88Q9BSF0 95 aa-1.52□□□□□ -2.65
SNORD28B-201ENST00000390993 DPY30Q9C005 99 aa-1.52□□□□□ -2.65
SNORD28B-201ENST00000390993 ATP10BO94823 1461 aa-1.52□□□□□ -2.65
SNORD28B-201ENST00000390993 ANKRD36CQ5JPF3 1778 aa-1.52□□□□□ -2.65
SNORD28B-201ENST00000390993 IGLV5-48A0A075B6I7 105 aa-1.53□□□□□ -2.65
SNORD28B-201ENST00000390993 ZFYVE16Q7Z3T8 1539 aa-1.53□□□□□ -2.65
SNORD28B-201ENST00000390993 CCNB3Q8WWL7 1395 aa-1.53□□□□□ -2.65
SNORD28B-201ENST00000390993 THOC2Q8NI27 1593 aaKnown RBP-1.54□□□□□ -2.66
SNORD28B-201ENST00000390993 ACBD7Q8N6N7 88 aa-1.54□□□□□ -2.66
SNORD28B-201ENST00000390993 TOGARAM1Q9Y4F4 1720 aa-1.54□□□□□ -2.66
SNORD28B-201ENST00000390993 ZNF831Q5JPB2 1677 aa-1.55□□□□□ -2.66
SNORD28B-201ENST00000390993 MYMXA0A1B0GTQ4 84 aa-1.55□□□□□ -2.66
SNORD28B-201ENST00000390993 MRPL33O75394 65 aaKnown RBP-1.55□□□□□ -2.66
SNORD28B-201ENST00000390993 WT1-ASQ06250 92 aa-1.55□□□□□ -2.66
SNORD28B-201ENST00000390993 NOP10Q9NPE3 64 aaKnown RBP-1.55□□□□□ -2.66
SNORD28B-201ENST00000390993 DNAH10Q8IVF4 4471 aa-1.55□□□□□ -2.66
SNORD28B-201ENST00000390993 DOT1LQ8TEK3 1739 aa-1.56□□□□□ -2.66
SNORD28B-201ENST00000390993 UMAD1C9J7I0 102 aa-1.56□□□□□ -2.66
SNORD28B-201ENST00000390993 GYPAP02724 150 aa-1.56□□□□□ -2.66
SNORD28B-201ENST00000390993 BVES-AS1Q5T3Y7 98 aa-1.56□□□□□ -2.66
SNORD28B-201ENST00000390993 MT1MQ8N339 61 aa-1.56□□□□□ -2.66
SNORD28B-201ENST00000390993 CCDC88BA6NC98 1476 aa-1.56□□□□□ -2.66
SNORD28B-201ENST00000390993 DDX60LQ5H9U9 1706 aaKnown RBP-1.57□□□□□ -2.66
SNORD28B-201ENST00000390993 MGAQ8IWI9 3026 aa-1.57□□□□□ -2.66
SNORD28B-201ENST00000390993 DMXL2Q8TDJ6 3036 aa-1.57□□□□□ -2.66
SNORD28B-201ENST00000390993 DEFB131BA0A096LNP1 70 aa-1.57□□□□□ -2.66
SNORD28B-201ENST00000390993 NDUFA4O00483 81 aa-1.57□□□□□ -2.66
SNORD28B-201ENST00000390993 MT1GP13640 62 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms