RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 IGLV7-46A0A075B6I9 117 aa13.27□□□□□ -0.28
NKX3-2-201ENST00000382438 LINC01558Q9Y6Z2 57 aa13.27□□□□□ -0.28
NKX3-2-201ENST00000382438 ADM2Q7Z4H4 148 aa13.26□□□□□ -0.29
NKX3-2-201ENST00000382438 ANK3Q12955 4377 aaKnown RBP13.25□□□□□ -0.29
NKX3-2-201ENST00000382438 ACANP16112 2415 aa13.24□□□□□ -0.29
NKX3-2-201ENST00000382438 BAHCC1Q9P281 2608 aa13.24□□□□□ -0.29
NKX3-2-201ENST00000382438 SPRR1AP35321 89 aa13.23□□□□□ -0.29
NKX3-2-201ENST00000382438 ITPR3Q14573 2671 aa13.22□□□□□ -0.29
NKX3-2-201ENST00000382438 KRTAP10-9P60411 292 aa13.21□□□□□ -0.29
NKX3-2-201ENST00000382438 PLAC8Q9NZF1 115 aa13.21□□□□□ -0.29
NKX3-2-201ENST00000382438 UBR5O95071 2799 aaPredicted RBP13.21□□□□□ -0.29
NKX3-2-201ENST00000382438 KRTAP7-1Q8IUC3 87 aa13.2□□□□□ -0.3
NKX3-2-201ENST00000382438 HIVEP1P15822 2718 aa13.19□□□□□ -0.3
NKX3-2-201ENST00000382438 SPART-AS1P0CW21 52 aa13.19□□□□□ -0.3
NKX3-2-201ENST00000382438 Q8NAQ8 132 aa13.19□□□□□ -0.3
NKX3-2-201ENST00000382438 SRRM2Q9UQ35 2752 aaKnown RBP13.19□□□□□ -0.3
NKX3-2-201ENST00000382438 FLNAP21333 2647 aaKnown RBP13.18□□□□□ -0.3
NKX3-2-201ENST00000382438 CSMD3Q7Z407 3707 aa13.16□□□□□ -0.3
NKX3-2-201ENST00000382438 TRRAPQ9Y4A5 3859 aa13.15□□□□□ -0.3
NKX3-2-201ENST00000382438 IGLV5-37A0A075B6J1 123 aa13.15□□□□□ -0.3
NKX3-2-201ENST00000382438 H0Y9J4 135 aa13.13□□□□□ -0.31
NKX3-2-201ENST00000382438 MDFIQ99750 246 aa13.12□□□□□ -0.31
NKX3-2-201ENST00000382438 PRLHP81277 87 aa13.12□□□□□ -0.31
NKX3-2-201ENST00000382438 A8MWP4 228 aa13.11□□□□□ -0.31
NKX3-2-201ENST00000382438 HRES1P13985 223 aa13.11□□□□□ -0.31
NKX3-2-201ENST00000382438 LINC01554Q52M75 96 aa13.08□□□□□ -0.31
NKX3-2-201ENST00000382438 REG3GQ6UW15 175 aa13.08□□□□□ -0.32
NKX3-2-201ENST00000382438 PLA2G2DQ9UNK4 145 aa13.06□□□□□ -0.32
NKX3-2-201ENST00000382438 A0A096LNI7 61 aa13.05□□□□□ -0.32
NKX3-2-201ENST00000382438 PDZD2O15018 2839 aa13.05□□□□□ -0.32
NKX3-2-201ENST00000382438 MMP24-AS1A0A0U1RRL7 71 aa13.05□□□□□ -0.32
NKX3-2-201ENST00000382438 PRR26Q8N8Z3 221 aa13.04□□□□□ -0.32
NKX3-2-201ENST00000382438 LINC00472Q9H8W2 130 aa13.04□□□□□ -0.32
NKX3-2-201ENST00000382438 DEFB113Q30KQ7 82 aa13.02□□□□□ -0.33
NKX3-2-201ENST00000382438 CASC10Q5T4H9 136 aa13.02□□□□□ -0.33
NKX3-2-201ENST00000382438 KRTAP10-3P60369 221 aa13.01□□□□□ -0.33
NKX3-2-201ENST00000382438 TENM2Q9NT68 2774 aa13.01□□□□□ -0.33
NKX3-2-201ENST00000382438 TLX1NBP0CAT3 122 aa13.01□□□□□ -0.33
NKX3-2-201ENST00000382438 IGLV8-61A0A075B6I0 122 aa12.98□□□□□ -0.33
NKX3-2-201ENST00000382438 IGKV2-24A0A0C4DH68 120 aa12.97□□□□□ -0.33
NKX3-2-201ENST00000382438 TEP1Q99973 2627 aaKnown RBP12.95□□□□□ -0.34
NKX3-2-201ENST00000382438 PLA2G1BP04054 148 aaKnown RBP12.95□□□□□ -0.34
NKX3-2-201ENST00000382438 FBN1P35555 2871 aaKnown RBP12.95□□□□□ -0.34
NKX3-2-201ENST00000382438 KRTAP1-3Q8IUG1 177 aa12.93□□□□□ -0.34
NKX3-2-201ENST00000382438 ITPR2Q14571 2701 aa12.9□□□□□ -0.34
NKX3-2-201ENST00000382438 KMT2BQ9UMN6 2715 aaPredicted RBP12.89□□□□□ -0.35
NKX3-2-201ENST00000382438 LINC01556Q5JQF7 62 aa12.89□□□□□ -0.35
NKX3-2-201ENST00000382438 Q6ZR54 194 aa12.84□□□□□ -0.35
NKX3-2-201ENST00000382438 TENM1Q9UKZ4 2725 aa12.84□□□□□ -0.35
NKX3-2-201ENST00000382438 TP53AIP1Q9HCN2 124 aa12.84□□□□□ -0.35
NKX3-2-201ENST00000382438 FASNP49327 2511 aaKnown RBP12.82□□□□□ -0.36
NKX3-2-201ENST00000382438 K7EIL1 84 aa12.82□□□□□ -0.36
NKX3-2-201ENST00000382438 TENM4Q6N022 2769 aa12.81□□□□□ -0.36
NKX3-2-201ENST00000382438 RTL8CO15255 209 aa12.8□□□□□ -0.36
NKX3-2-201ENST00000382438 TENM3Q9P273 2699 aa12.8□□□□□ -0.36
NKX3-2-201ENST00000382438 HELZ2Q9BYK8 2649 aaKnown RBP12.79□□□□□ -0.36
NKX3-2-201ENST00000382438 IGHV6-1A0A0B4J1U7 121 aa12.78□□□□□ -0.36
NKX3-2-201ENST00000382438 C8orf17Q9NRJ1 99 aa12.78□□□□□ -0.36
NKX3-2-201ENST00000382438 NOTCH2Q04721 2471 aa12.78□□□□□ -0.36
NKX3-2-201ENST00000382438 COL7A1Q02388 2944 aa12.77□□□□□ -0.36
NKX3-2-201ENST00000382438 CSAG1Q6PB30 78 aa12.77□□□□□ -0.36
NKX3-2-201ENST00000382438 H3BNG1 76 aa12.77□□□□□ -0.37
NKX3-2-201ENST00000382438 KRTAP11-1Q8IUC1 163 aa12.76□□□□□ -0.37
NKX3-2-201ENST00000382438 DEFB131BA0A096LNP1 70 aa12.76□□□□□ -0.37
NKX3-2-201ENST00000382438 ASB16-AS1Q495Z4 193 aa12.75□□□□□ -0.37
NKX3-2-201ENST00000382438 RETNLBQ9BQ08 111 aa12.73□□□□□ -0.37
NKX3-2-201ENST00000382438 Q96NJ1 140 aa12.73□□□□□ -0.37
NKX3-2-201ENST00000382438 ATRQ13535 2644 aa12.7□□□□□ -0.38
NKX3-2-201ENST00000382438 A0A087X002 238 aa12.7□□□□□ -0.38
NKX3-2-201ENST00000382438 NOTCH2NLQ7Z3S9 236 aa12.7□□□□□ -0.38
NKX3-2-201ENST00000382438 DNAH10OSP0CZ25 163 aa12.69□□□□□ -0.38
NKX3-2-201ENST00000382438 KRTAP1-1Q07627 177 aa12.69□□□□□ -0.38
NKX3-2-201ENST00000382438 A0A1B0GU69 56 aa12.68□□□□□ -0.38
NKX3-2-201ENST00000382438 ALMS1Q8TCU4 4167 aa12.67□□□□□ -0.38
NKX3-2-201ENST00000382438 SPATA8Q6RVD6 105 aa12.66□□□□□ -0.38
NKX3-2-201ENST00000382438 IGLV9-49A0A0B4J1Y8 123 aa12.65□□□□□ -0.38
NKX3-2-201ENST00000382438 MRPL34Q9BQ48 92 aaKnown RBP12.65□□□□□ -0.38
NKX3-2-201ENST00000382438 DNAH10Q8IVF4 4471 aa12.65□□□□□ -0.38
NKX3-2-201ENST00000382438 SPRR1BP22528 89 aa12.65□□□□□ -0.38
NKX3-2-201ENST00000382438 ACYP2P14621 99 aa12.63□□□□□ -0.39
NKX3-2-201ENST00000382438 Q5W150 140 aa12.63□□□□□ -0.39
NKX3-2-201ENST00000382438 SMR3AQ99954 134 aa12.63□□□□□ -0.39
NKX3-2-201ENST00000382438 MIR22HGQ0VDD5 57 aa12.62□□□□□ -0.39
NKX3-2-201ENST00000382438 DNAH1Q9P2D7 4330 aa12.62□□□□□ -0.39
NKX3-2-201ENST00000382438 CHTF8P0CG12 524 aa12.61□□□□□ -0.39
NKX3-2-201ENST00000382438 HECTD1Q9ULT8 2610 aa12.61□□□□□ -0.39
NKX3-2-201ENST00000382438 A0A1B0GVX0 72 aa12.61□□□□□ -0.39
NKX3-2-201ENST00000382438 FLNBO75369 2602 aaKnown RBP12.58□□□□□ -0.4
NKX3-2-201ENST00000382438 ANK2Q01484 3957 aa12.57□□□□□ -0.4
NKX3-2-201ENST00000382438 CDK2AP2O75956 126 aa12.56□□□□□ -0.4
NKX3-2-201ENST00000382438 UQCR11O14957 56 aa12.53□□□□□ -0.4
NKX3-2-201ENST00000382438 C1orf134Q5TEV5 83 aa12.48□□□□□ -0.41
NKX3-2-201ENST00000382438 NBEAL1Q6ZS30 2694 aa12.46□□□□□ -0.41
NKX3-2-201ENST00000382438 LYSTQ99698 3801 aa12.46□□□□□ -0.41
NKX3-2-201ENST00000382438 SPINK6Q6UWN8 80 aa12.44□□□□□ -0.42
NKX3-2-201ENST00000382438 DMAC1Q96GE9 116 aa12.44□□□□□ -0.42
NKX3-2-201ENST00000382438 OXLD1Q5BKU9 147 aa12.44□□□□□ -0.42
NKX3-2-201ENST00000382438 KRTAP13-3Q3SY46 172 aa12.43□□□□□ -0.42
NKX3-2-201ENST00000382438 ZNF706Q9Y5V0 76 aaPredicted RBP12.43□□□□□ -0.42
NKX3-2-201ENST00000382438 J3QKU1 62 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms