RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 NCOR2Q9Y618 2525 aa4.42□□□□□ -1.7
DDX58-202ENST00000379883 ITPR1Q14643 2758 aa4.42□□□□□ -1.7
DDX58-202ENST00000379883 KRTAP1-1Q07627 177 aa4.42□□□□□ -1.7
DDX58-202ENST00000379883 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
DDX58-202ENST00000379883 PTPN13Q12923 2485 aa4.41□□□□□ -1.7
DDX58-202ENST00000379883 ZFYVE26Q68DK2 2539 aa4.4□□□□□ -1.7
DDX58-202ENST00000379883 SETXQ7Z333 2677 aaKnown RBP4.4□□□□□ -1.71
DDX58-202ENST00000379883 HIVEP2P31629 2446 aa4.4□□□□□ -1.71
DDX58-202ENST00000379883 ADM2Q7Z4H4 148 aa4.4□□□□□ -1.71
DDX58-202ENST00000379883 UBE2DNLQ8IWF7 75 aa4.4□□□□□ -1.71
DDX58-202ENST00000379883 ACACBO00763 2458 aa4.4□□□□□ -1.71
DDX58-202ENST00000379883 FAM229AH3BQW9 127 aa4.39□□□□□ -1.71
DDX58-202ENST00000379883 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
DDX58-202ENST00000379883 Q96NJ1 140 aa4.39□□□□□ -1.71
DDX58-202ENST00000379883 EPG5Q9HCE0 2579 aa4.39□□□□□ -1.71
DDX58-202ENST00000379883 RELNP78509 3460 aa4.37□□□□□ -1.71
DDX58-202ENST00000379883 SONP18583 2426 aaKnown RBP4.37□□□□□ -1.71
DDX58-202ENST00000379883 SPINK6Q6UWN8 80 aa4.37□□□□□ -1.71
DDX58-202ENST00000379883 LRRK2Q5S007 2527 aa4.36□□□□□ -1.71
DDX58-202ENST00000379883 FAM208BQ5VWN6 2430 aa4.36□□□□□ -1.71
DDX58-202ENST00000379883 COL12A1Q99715 3063 aa4.36□□□□□ -1.71
DDX58-202ENST00000379883 MUC3AQ02505 3323 aa4.35□□□□□ -1.71
DDX58-202ENST00000379883 POLQO75417 2590 aa4.35□□□□□ -1.71
DDX58-202ENST00000379883 GCN1Q92616 2671 aaKnown RBP4.35□□□□□ -1.71
DDX58-202ENST00000379883 LINC00483Q53H64 154 aa4.35□□□□□ -1.71
DDX58-202ENST00000379883 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
DDX58-202ENST00000379883 UTP20O75691 2785 aaKnown RBP4.33□□□□□ -1.72
DDX58-202ENST00000379883 SETD2Q9BYW2 2564 aaPredicted RBP4.33□□□□□ -1.72
DDX58-202ENST00000379883 K7ERS5 55 aa4.33□□□□□ -1.72
DDX58-202ENST00000379883 C1orf134Q5TEV5 83 aa4.33□□□□□ -1.72
DDX58-202ENST00000379883 MXRA5Q9NR99 2828 aa4.33□□□□□ -1.72
DDX58-202ENST00000379883 CRYBG3Q68DQ2 2970 aa4.32□□□□□ -1.72
DDX58-202ENST00000379883 NBEAL2Q6ZNJ1 2754 aa4.32□□□□□ -1.72
DDX58-202ENST00000379883 TEX15Q9BXT5 2789 aa4.31□□□□□ -1.72
DDX58-202ENST00000379883 Q5W150 140 aa4.31□□□□□ -1.72
DDX58-202ENST00000379883 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
DDX58-202ENST00000379883 K7EIL1 84 aa4.31□□□□□ -1.72
DDX58-202ENST00000379883 KRTAP10-11P60412 298 aa4.3□□□□□ -1.72
DDX58-202ENST00000379883 INAFM1C9JVW0 142 aa4.3□□□□□ -1.72
DDX58-202ENST00000379883 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
DDX58-202ENST00000379883 SMR3AQ99954 134 aa4.3□□□□□ -1.72
DDX58-202ENST00000379883 PKD1L2Q7Z442 2459 aa4.3□□□□□ -1.72
DDX58-202ENST00000379883 IGLV7-43P04211 117 aa4.3□□□□□ -1.72
DDX58-202ENST00000379883 ABCA12Q86UK0 2595 aa4.29□□□□□ -1.72
DDX58-202ENST00000379883 KRTAP11-1Q8IUC1 163 aa4.29□□□□□ -1.72
DDX58-202ENST00000379883 APCP25054 2843 aa4.29□□□□□ -1.72
DDX58-202ENST00000379883 ZNF861PO60384 105 aa4.29□□□□□ -1.72
DDX58-202ENST00000379883 CCDC168Q8NDH2 2452 aa4.29□□□□□ -1.72
DDX58-202ENST00000379883 CIRBP-AS1Q8TBR5 109 aa4.28□□□□□ -1.72
DDX58-202ENST00000379883 WWC2-AS2Q96NR7 200 aa4.28□□□□□ -1.72
DDX58-202ENST00000379883 MYO18BQ8IUG5 2567 aa4.28□□□□□ -1.72
DDX58-202ENST00000379883 ZANQ9Y493 2812 aa4.28□□□□□ -1.72
DDX58-202ENST00000379883 KRTAP13-3Q3SY46 172 aa4.28□□□□□ -1.72
DDX58-202ENST00000379883 NOTCH2NLQ7Z3S9 236 aa4.28□□□□□ -1.72
DDX58-202ENST00000379883 CHD8Q9HCK8 2581 aa4.28□□□□□ -1.72
DDX58-202ENST00000379883 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
DDX58-202ENST00000379883 SSBP3-AS1Q7Z2R9 100 aa4.27□□□□□ -1.73
DDX58-202ENST00000379883 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
DDX58-202ENST00000379883 NBPF19A0A087WUL8 3843 aa4.26□□□□□ -1.73
DDX58-202ENST00000379883 CACNA1AO00555 2505 aa4.26□□□□□ -1.73
DDX58-202ENST00000379883 LY6G6CO95867 125 aa4.25□□□□□ -1.73
DDX58-202ENST00000379883 F8P00451 2351 aa4.25□□□□□ -1.73
DDX58-202ENST00000379883 ROMO1P60602 79 aa4.25□□□□□ -1.73
DDX58-202ENST00000379883 CELSR2Q9HCU4 2923 aa4.24□□□□□ -1.73
DDX58-202ENST00000379883 VPS13CQ709C8 3753 aa4.24□□□□□ -1.73
DDX58-202ENST00000379883 ITPR3Q14573 2671 aa4.24□□□□□ -1.73
DDX58-202ENST00000379883 MTORP42345 2549 aa4.24□□□□□ -1.73
DDX58-202ENST00000379883 SPINK1P00995 79 aa4.24□□□□□ -1.73
DDX58-202ENST00000379883 FBN2P35556 2912 aa4.24□□□□□ -1.73
DDX58-202ENST00000379883 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
DDX58-202ENST00000379883 SPACA4Q8TDM5 124 aa4.23□□□□□ -1.73
DDX58-202ENST00000379883 UNC79Q9P2D8 2635 aa4.23□□□□□ -1.73
DDX58-202ENST00000379883 CFAP46Q8IYW2 2715 aa4.22□□□□□ -1.73
DDX58-202ENST00000379883 PSORS1C2Q9UIG4 136 aa4.22□□□□□ -1.73
DDX58-202ENST00000379883 AKAP9Q99996 3911 aa4.22□□□□□ -1.73
DDX58-202ENST00000379883 FLNAP21333 2647 aaKnown RBP4.22□□□□□ -1.73
DDX58-202ENST00000379883 KRTAP1-5Q9BYS1 174 aa4.21□□□□□ -1.74
DDX58-202ENST00000379883 SPTBN4Q9H254 2564 aa4.21□□□□□ -1.74
DDX58-202ENST00000379883 J3QKU1 62 aa4.21□□□□□ -1.74
DDX58-202ENST00000379883 ANAPC11Q9NYG5 84 aa4.2□□□□□ -1.74
DDX58-202ENST00000379883 ZNF462Q96JM2 2506 aa4.2□□□□□ -1.74
DDX58-202ENST00000379883 NBDYA0A0U1RRE5 68 aa4.2□□□□□ -1.74
DDX58-202ENST00000379883 A8MUU9 505 aa4.19□□□□□ -1.74
DDX58-202ENST00000379883 FLNCQ14315 2725 aa4.19□□□□□ -1.74
DDX58-202ENST00000379883 A0A1B0GU33 70 aa4.18□□□□□ -1.74
DDX58-202ENST00000379883 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.18□□□□□ -1.74
DDX58-202ENST00000379883 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
DDX58-202ENST00000379883 NF1P21359 2839 aa4.16□□□□□ -1.74
DDX58-202ENST00000379883 NIPBLQ6KC79 2804 aaeCLIP4.16□□□□□ -1.74
DDX58-202ENST00000379883 PANO1I0J062 215 aa4.16□□□□□ -1.74
DDX58-202ENST00000379883 LINC00304Q8N9R0 145 aa4.16□□□□□ -1.74
DDX58-202ENST00000379883 ACANP16112 2415 aa4.16□□□□□ -1.74
DDX58-202ENST00000379883 NOTCH2Q04721 2471 aa4.15□□□□□ -1.74
DDX58-202ENST00000379883 CSMD2Q7Z408 3487 aa4.15□□□□□ -1.74
DDX58-202ENST00000379883 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
DDX58-202ENST00000379883 CENPEQ02224 2701 aa4.14□□□□□ -1.75
DDX58-202ENST00000379883 PIEZO1Q92508 2521 aa4.14□□□□□ -1.75
DDX58-202ENST00000379883 NUPR2A6NF83 97 aa4.14□□□□□ -1.75
DDX58-202ENST00000379883 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
DDX58-202ENST00000379883 IGSF10Q6WRI0 2623 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms