RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 LAMA1P25391 3075 aa7.08□□□□□ -1.28
RPGR-203ENST00000378505 CELSR3Q9NYQ7 3312 aa7.07□□□□□ -1.28
RPGR-203ENST00000378505 FREM2Q5SZK8 3169 aa7.06□□□□□ -1.28
RPGR-203ENST00000378505 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.05□□□□□ -1.28
RPGR-203ENST00000378505 SMR3BP02814 79 aaPredicted RBP7.05□□□□□ -1.28
RPGR-203ENST00000378505 KALRNO60229 2985 aa7.05□□□□□ -1.28
RPGR-203ENST00000378505 ITPR1Q14643 2758 aa7.05□□□□□ -1.28
RPGR-203ENST00000378505 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
RPGR-203ENST00000378505 CD164Q04900 197 aa7.04□□□□□ -1.28
RPGR-203ENST00000378505 ATMQ13315 3056 aa7.03□□□□□ -1.28
RPGR-203ENST00000378505 TNP2Q05952 138 aa7.03□□□□□ -1.28
RPGR-203ENST00000378505 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
RPGR-203ENST00000378505 KRTAP26-1Q6PEX3 210 aa7.02□□□□□ -1.29
RPGR-203ENST00000378505 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
RPGR-203ENST00000378505 TACC2O95359 2948 aa7.02□□□□□ -1.29
RPGR-203ENST00000378505 ADGRG4Q8IZF6 3080 aa7.02□□□□□ -1.29
RPGR-203ENST00000378505 FRYLO94915 3013 aa7.01□□□□□ -1.29
RPGR-203ENST00000378505 VCANP13611 3396 aa7□□□□□ -1.29
RPGR-203ENST00000378505 SPRR1BP22528 89 aa7□□□□□ -1.29
RPGR-203ENST00000378505 SZT2Q5T011 3432 aa6.99□□□□□ -1.29
RPGR-203ENST00000378505 STAB2Q8WWQ8 2551 aa6.99□□□□□ -1.29
RPGR-203ENST00000378505 Q1T7F1 81 aa6.98□□□□□ -1.29
RPGR-203ENST00000378505 IGLV7-46A0A075B6I9 117 aa6.98□□□□□ -1.29
RPGR-203ENST00000378505 COL12A1Q99715 3063 aa6.98□□□□□ -1.29
RPGR-203ENST00000378505 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
RPGR-203ENST00000378505 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
RPGR-203ENST00000378505 PLAC8Q9NZF1 115 aa6.97□□□□□ -1.29
RPGR-203ENST00000378505 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.29
RPGR-203ENST00000378505 DMXL2Q8TDJ6 3036 aa6.96□□□□□ -1.3
RPGR-203ENST00000378505 BOD1L1Q8NFC6 3051 aa6.95□□□□□ -1.3
RPGR-203ENST00000378505 ITPR2Q14571 2701 aa6.95□□□□□ -1.3
RPGR-203ENST00000378505 KRTAP1-5Q9BYS1 174 aa6.95□□□□□ -1.3
RPGR-203ENST00000378505 LINC00472Q9H8W2 130 aa6.94□□□□□ -1.3
RPGR-203ENST00000378505 FAM229BQ4G0N7 80 aa6.94□□□□□ -1.3
RPGR-203ENST00000378505 Q8N1X5 172 aa6.94□□□□□ -1.3
RPGR-203ENST00000378505 CDC42SE1Q9NRR8 79 aa6.93□□□□□ -1.3
RPGR-203ENST00000378505 BAHCC1Q9P281 2608 aa6.92□□□□□ -1.3
RPGR-203ENST00000378505 KTN1-AS1Q86SY8 53 aa6.91□□□□□ -1.3
RPGR-203ENST00000378505 J3QL48 77 aa6.9□□□□□ -1.3
RPGR-203ENST00000378505 HRES1P13985 223 aa6.9□□□□□ -1.31
RPGR-203ENST00000378505 FLG2Q5D862 2391 aaPredicted RBP6.88□□□□□ -1.31
RPGR-203ENST00000378505 Q5XG85 94 aa6.88□□□□□ -1.31
RPGR-203ENST00000378505 FP248Q71RG6 208 aaPredicted RBP6.88□□□□□ -1.31
RPGR-203ENST00000378505 DNAH14Q0VDD8 3507 aa6.87□□□□□ -1.31
RPGR-203ENST00000378505 LRBAP50851 2863 aa6.87□□□□□ -1.31
RPGR-203ENST00000378505 Q8N9P0 234 aaPredicted RBP6.87□□□□□ -1.31
RPGR-203ENST00000378505 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
RPGR-203ENST00000378505 ASH1LQ9NR48 2969 aaKnown RBP6.86□□□□□ -1.31
RPGR-203ENST00000378505 ZZEF1O43149 2961 aa6.86□□□□□ -1.31
RPGR-203ENST00000378505 UTP20O75691 2785 aaKnown RBP6.85□□□□□ -1.31
RPGR-203ENST00000378505 LCA10Q71F78 164 aa6.85□□□□□ -1.31
RPGR-203ENST00000378505 Q75L30 129 aa6.84□□□□□ -1.31
RPGR-203ENST00000378505 NIPBLQ6KC79 2804 aaeCLIP6.84□□□□□ -1.31
RPGR-203ENST00000378505 SPINT4Q6UDR6 99 aa6.84□□□□□ -1.31
RPGR-203ENST00000378505 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.32
RPGR-203ENST00000378505 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
RPGR-203ENST00000378505 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
RPGR-203ENST00000378505 RBM12B-AS1Q9P1G2 102 aa6.83□□□□□ -1.32
RPGR-203ENST00000378505 DMBT1Q9UGM3 2413 aaPredicted RBP6.81□□□□□ -1.32
RPGR-203ENST00000378505 HIVEP1P15822 2718 aa6.79□□□□□ -1.32
RPGR-203ENST00000378505 ZCCHC13Q8WW36 166 aaKnown RBP6.79□□□□□ -1.32
RPGR-203ENST00000378505 ZANQ9Y493 2812 aa6.79□□□□□ -1.32
RPGR-203ENST00000378505 Q5W150 140 aa6.79□□□□□ -1.32
RPGR-203ENST00000378505 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
RPGR-203ENST00000378505 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
RPGR-203ENST00000378505 OXTP01178 125 aa6.77□□□□□ -1.33
RPGR-203ENST00000378505 COL6A3P12111 3177 aa6.77□□□□□ -1.33
RPGR-203ENST00000378505 LINC00483Q53H64 154 aa6.76□□□□□ -1.33
RPGR-203ENST00000378505 REV3LO60673 3130 aa6.76□□□□□ -1.33
RPGR-203ENST00000378505 A0A0D9SG42 100 aa6.76□□□□□ -1.33
RPGR-203ENST00000378505 APCP25054 2843 aa6.76□□□□□ -1.33
RPGR-203ENST00000378505 A0A1B0GU33 70 aa6.75□□□□□ -1.33
RPGR-203ENST00000378505 PANO1I0J062 215 aa6.74□□□□□ -1.33
RPGR-203ENST00000378505 Q5VV11 94 aa6.74□□□□□ -1.33
RPGR-203ENST00000378505 KMT2BQ9UMN6 2715 aaPredicted RBP6.74□□□□□ -1.33
RPGR-203ENST00000378505 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
RPGR-203ENST00000378505 KRTAP10-1P60331 282 aa6.71□□□□□ -1.34
RPGR-203ENST00000378505 Q6ZSA8 131 aa6.71□□□□□ -1.34
RPGR-203ENST00000378505 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
RPGR-203ENST00000378505 EYSQ5T1H1 3165 aa6.7□□□□□ -1.34
RPGR-203ENST00000378505 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
RPGR-203ENST00000378505 Q6ZR54 194 aa6.7□□□□□ -1.34
RPGR-203ENST00000378505 DCHS2Q6V1P9 2916 aa6.68□□□□□ -1.34
RPGR-203ENST00000378505 SPINK7P58062 85 aa6.68□□□□□ -1.34
RPGR-203ENST00000378505 TENM4Q6N022 2769 aa6.66□□□□□ -1.34
RPGR-203ENST00000378505 DMAC1Q96GE9 116 aa6.65□□□□□ -1.34
RPGR-203ENST00000378505 SPEGQ15772 3267 aa6.65□□□□□ -1.34
RPGR-203ENST00000378505 KRTAP7-1Q8IUC3 87 aa6.65□□□□□ -1.35
RPGR-203ENST00000378505 DMXL1Q9Y485 3027 aa6.64□□□□□ -1.35
RPGR-203ENST00000378505 NF1P21359 2839 aa6.63□□□□□ -1.35
RPGR-203ENST00000378505 KRTAP11-1Q8IUC1 163 aa6.63□□□□□ -1.35
RPGR-203ENST00000378505 Q6ZRN7 208 aaPredicted RBP6.62□□□□□ -1.35
RPGR-203ENST00000378505 HRNRQ86YZ3 2850 aaPredicted RBP6.61□□□□□ -1.35
RPGR-203ENST00000378505 LCE6AA0A183 80 aa6.6□□□□□ -1.35
RPGR-203ENST00000378505 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
RPGR-203ENST00000378505 TNRC18O15417 2968 aaPredicted RBP6.6□□□□□ -1.35
RPGR-203ENST00000378505 A0A087X002 238 aa6.6□□□□□ -1.35
RPGR-203ENST00000378505 FBN2P35556 2912 aa6.58□□□□□ -1.36
RPGR-203ENST00000378505 LOC400499M0QZD8 3231 aa6.58□□□□□ -1.36
RPGR-203ENST00000378505 NOTCH2NLQ7Z3S9 236 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms