RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 TAL2Q16559 108 aa9.37□□□□□ -0.91
HLA-A-201ENST00000376802 SMIM29Q86T20 159 aa9.37□□□□□ -0.91
HLA-A-201ENST00000376802 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
HLA-A-201ENST00000376802 H7C2G1 150 aa9.36□□□□□ -0.91
HLA-A-201ENST00000376802 CFC1BP0CG36 223 aa9.36□□□□□ -0.91
HLA-A-201ENST00000376802 Q5XG85 94 aa9.36□□□□□ -0.91
HLA-A-201ENST00000376802 TEX49A0A1B0GTD5 131 aa9.35□□□□□ -0.91
HLA-A-201ENST00000376802 HSD52Q0P140 79 aa9.35□□□□□ -0.91
HLA-A-201ENST00000376802 KRTAP10-6P60371 365 aaPredicted RBP9.34□□□□□ -0.91
HLA-A-201ENST00000376802 C1orf195Q5TG92 126 aa9.34□□□□□ -0.91
HLA-A-201ENST00000376802 Q6ZVH6 145 aa9.34□□□□□ -0.91
HLA-A-201ENST00000376802 A0A0G2JQZ4 141 aa9.33□□□□□ -0.92
HLA-A-201ENST00000376802 TRBV7-6A0A0J9YX20 115 aa9.32□□□□□ -0.92
HLA-A-201ENST00000376802 M0R143 59 aa9.31□□□□□ -0.92
HLA-A-201ENST00000376802 IGLV5-48A0A075B6I7 105 aa9.31□□□□□ -0.92
HLA-A-201ENST00000376802 HIST1H4GQ99525 98 aa9.31□□□□□ -0.92
HLA-A-201ENST00000376802 COPS9Q8WXC6 57 aa9.3□□□□□ -0.92
HLA-A-201ENST00000376802 IFITM1P13164 125 aa9.29□□□□□ -0.92
HLA-A-201ENST00000376802 RPL37P61927 97 aaKnown RBP9.29□□□□□ -0.92
HLA-A-201ENST00000376802 A0A1B0GWB2 263 aa9.28□□□□□ -0.92
HLA-A-201ENST00000376802 BVES-AS1Q5T3Y7 98 aa9.28□□□□□ -0.92
HLA-A-201ENST00000376802 CEND1Q8N111 149 aa9.28□□□□□ -0.92
HLA-A-201ENST00000376802 FLGP20930 4061 aaPredicted RBP9.27□□□□□ -0.93
HLA-A-201ENST00000376802 TMEM238LA0A1B0GVL6 79 aa9.25□□□□□ -0.93
HLA-A-201ENST00000376802 A6NJY4 79 aa9.25□□□□□ -0.93
HLA-A-201ENST00000376802 SNHG12Q9BXW3 62 aa9.25□□□□□ -0.93
HLA-A-201ENST00000376802 A6NDN8 102 aa9.23□□□□□ -0.93
HLA-A-201ENST00000376802 FXYD2P54710 66 aa9.23□□□□□ -0.93
HLA-A-201ENST00000376802 LOC100996750A0A140TA64 210 aa9.22□□□□□ -0.93
HLA-A-201ENST00000376802 MUSTN1Q8IVN3 82 aa9.22□□□□□ -0.93
HLA-A-201ENST00000376802 KRTAP4-6Q9BYQ5 205 aa9.22□□□□□ -0.93
HLA-A-201ENST00000376802 M0R2T5 61 aa9.21□□□□□ -0.94
HLA-A-201ENST00000376802 A4D1N5 150 aa9.2□□□□□ -0.94
HLA-A-201ENST00000376802 BATFQ16520 125 aa9.19□□□□□ -0.94
HLA-A-201ENST00000376802 SMIM11BQ8TCY0 68 aa9.19□□□□□ -0.94
HLA-A-201ENST00000376802 TCL1BO95988 128 aa9.18□□□□□ -0.94
HLA-A-201ENST00000376802 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
HLA-A-201ENST00000376802 COX6B2Q6YFQ2 88 aa9.18□□□□□ -0.94
HLA-A-201ENST00000376802 A0A0B4J2C4 111 aa9.17□□□□□ -0.94
HLA-A-201ENST00000376802 NHP2Q9NX24 153 aaKnown RBP9.16□□□□□ -0.94
HLA-A-201ENST00000376802 TRAV13-2A0A0B4J235 113 aa9.15□□□□□ -0.94
HLA-A-201ENST00000376802 CFC1P0CG37 223 aa9.14□□□□□ -0.95
HLA-A-201ENST00000376802 K7ERJ3 54 aa9.11□□□□□ -0.95
HLA-A-201ENST00000376802 LINC00575Q6W349 94 aa9.11□□□□□ -0.95
HLA-A-201ENST00000376802 RAB37Q96AX2 223 aa9.11□□□□□ -0.95
HLA-A-201ENST00000376802 PRO1854Q9UHT4 67 aa9.11□□□□□ -0.95
HLA-A-201ENST00000376802 F8WEM9 126 aa9.09□□□□□ -0.95
HLA-A-201ENST00000376802 TRBV7-7A0A0K0K1E9 115 aa9.08□□□□□ -0.96
HLA-A-201ENST00000376802 TAX1BP3O14907 124 aa9.08□□□□□ -0.96
HLA-A-201ENST00000376802 IGFL1Q6UW32 110 aa9.08□□□□□ -0.96
HLA-A-201ENST00000376802 Q6JHZ5 121 aa9.07□□□□□ -0.96
HLA-A-201ENST00000376802 Q6ZQY7 126 aa9.07□□□□□ -0.96
HLA-A-201ENST00000376802 CLEC2BQ92478 149 aa9.07□□□□□ -0.96
HLA-A-201ENST00000376802 VAMP3Q15836 100 aa9.06□□□□□ -0.96
HLA-A-201ENST00000376802 OBSCN-AS1Q96MR7 158 aa9.06□□□□□ -0.96
HLA-A-201ENST00000376802 hADV29S1A0JD25 119 aa9.05□□□□□ -0.96
HLA-A-201ENST00000376802 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
HLA-A-201ENST00000376802 OCIAD2Q56VL3 154 aa9.05□□□□□ -0.96
HLA-A-201ENST00000376802 Q75L30 129 aa9.05□□□□□ -0.96
HLA-A-201ENST00000376802 ATP11AUNQ6ZP68 121 aa9.03□□□□□ -0.96
HLA-A-201ENST00000376802 Q6Q795 121 aa9.01□□□□□ -0.97
HLA-A-201ENST00000376802 H3BUT2 72 aa9□□□□□ -0.97
HLA-A-201ENST00000376802 LYRM7Q5U5X0 104 aa9□□□□□ -0.97
HLA-A-201ENST00000376802 A0A1W2PPM0 123 aa8.99□□□□□ -0.97
HLA-A-201ENST00000376802 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
HLA-A-201ENST00000376802 TRIAP1O43715 76 aa8.97□□□□□ -0.97
HLA-A-201ENST00000376802 FABP2P12104 132 aa8.97□□□□□ -0.97
HLA-A-201ENST00000376802 COX6CP09669 75 aa8.96□□□□□ -0.98
HLA-A-201ENST00000376802 PSMB2P49721 201 aa8.96□□□□□ -0.98
HLA-A-201ENST00000376802 PPDPFLQ8WWR9 84 aa8.96□□□□□ -0.98
HLA-A-201ENST00000376802 NAA38Q9BRA0 125 aaKnown RBP8.96□□□□□ -0.98
HLA-A-201ENST00000376802 KRTAP9-8Q9BYQ0 159 aa8.96□□□□□ -0.98
HLA-A-201ENST00000376802 LST1O00453 97 aa8.95□□□□□ -0.98
HLA-A-201ENST00000376802 Q96NJ1 140 aa8.95□□□□□ -0.98
HLA-A-201ENST00000376802 A0A1B0GV90 55 aa8.93□□□□□ -0.98
HLA-A-201ENST00000376802 C20orf166-AS1Q96NR2 134 aa8.93□□□□□ -0.98
HLA-A-201ENST00000376802 TRBV20-1A0A075B6N2 111 aa8.92□□□□□ -0.98
HLA-A-201ENST00000376802 H0YGX0 51 aa8.91□□□□□ -0.98
HLA-A-201ENST00000376802 SCGB1C2P0DMR2 95 aa8.91□□□□□ -0.98
HLA-A-201ENST00000376802 SPCS1Q9Y6A9 102 aa8.91□□□□□ -0.98
HLA-A-201ENST00000376802 A8MUU9 505 aa8.9□□□□□ -0.98
HLA-A-201ENST00000376802 K7EP34 96 aa8.9□□□□□ -0.98
HLA-A-201ENST00000376802 GTF2H5Q6ZYL4 71 aa8.89□□□□□ -0.99
HLA-A-201ENST00000376802 USH2AO75445 5202 aa8.87□□□□□ -0.99
HLA-A-201ENST00000376802 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.87□□□□□ -0.99
HLA-A-201ENST00000376802 SS18L2Q9UHA2 77 aa8.87□□□□□ -0.99
HLA-A-201ENST00000376802 A0A1B0GX51 115 aa8.86□□□□□ -0.99
HLA-A-201ENST00000376802 ATXN8Q156A1 80 aa8.86□□□□□ -0.99
HLA-A-201ENST00000376802 SSPOA2VEC9 5147 aa8.86□□□□□ -0.99
HLA-A-201ENST00000376802 TEN1Q86WV5 123 aa8.85□□□□□ -0.99
HLA-A-201ENST00000376802 TRACP01848 142 aa8.84□□□□□ -0.99
HLA-A-201ENST00000376802 KRTAP9-7A8MTY7 169 aa8.83□□□□□ -1
HLA-A-201ENST00000376802 UBE2V1Q13404 147 aa8.83□□□□□ -1
HLA-A-201ENST00000376802 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
HLA-A-201ENST00000376802 FAM218AQ96MZ4 157 aa8.82□□□□□ -1
HLA-A-201ENST00000376802 A0A087WSZ3 146 aa8.81□□□□□ -1
HLA-A-201ENST00000376802 H3BMG7 143 aa8.81□□□□□ -1
HLA-A-201ENST00000376802 SNCGO76070 127 aa8.81□□□□□ -1
HLA-A-201ENST00000376802 KRTAP16-1A8MUX0 517 aa8.8□□□□□ -1
HLA-A-201ENST00000376802 DSCR10P59022 87 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms