RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 VPS13AQ96RL7 3174 aa6.9□□□□□ -1.3
MDC1-201ENST00000376406 LCE6AA0A183 80 aa6.89□□□□□ -1.31
MDC1-201ENST00000376406 BRCA2P51587 3418 aa6.89□□□□□ -1.31
MDC1-201ENST00000376406 Q6ZSA8 131 aa6.88□□□□□ -1.31
MDC1-201ENST00000376406 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
MDC1-201ENST00000376406 WDFY4Q6ZS81 3184 aa6.87□□□□□ -1.31
MDC1-201ENST00000376406 NSD1Q96L73 2696 aaPredicted RBP6.86□□□□□ -1.31
MDC1-201ENST00000376406 Q1T7F1 81 aa6.86□□□□□ -1.31
MDC1-201ENST00000376406 NOTCH1P46531 2555 aa6.85□□□□□ -1.31
MDC1-201ENST00000376406 TRIOO75962 3097 aa6.84□□□□□ -1.31
MDC1-201ENST00000376406 Q8NDZ9 215 aa6.84□□□□□ -1.31
MDC1-201ENST00000376406 MAP1AP78559 2803 aaPredicted RBP6.84□□□□□ -1.32
MDC1-201ENST00000376406 SPRR1AP35321 89 aa6.83□□□□□ -1.32
MDC1-201ENST00000376406 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
MDC1-201ENST00000376406 FRYLO94915 3013 aa6.81□□□□□ -1.32
MDC1-201ENST00000376406 CDC42SE1Q9NRR8 79 aa6.81□□□□□ -1.32
MDC1-201ENST00000376406 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
MDC1-201ENST00000376406 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
MDC1-201ENST00000376406 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
MDC1-201ENST00000376406 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
MDC1-201ENST00000376406 STAB2Q8WWQ8 2551 aa6.78□□□□□ -1.32
MDC1-201ENST00000376406 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.33
MDC1-201ENST00000376406 OXTP01178 125 aa6.77□□□□□ -1.33
MDC1-201ENST00000376406 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
MDC1-201ENST00000376406 UTP20O75691 2785 aaKnown RBP6.75□□□□□ -1.33
MDC1-201ENST00000376406 MMP24-AS1A0A0U1RRL7 71 aa6.74□□□□□ -1.33
MDC1-201ENST00000376406 Q8N1X5 172 aa6.74□□□□□ -1.33
MDC1-201ENST00000376406 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
MDC1-201ENST00000376406 SPRR1BP22528 89 aa6.74□□□□□ -1.33
MDC1-201ENST00000376406 Q5VSD8 79 aa6.73□□□□□ -1.33
MDC1-201ENST00000376406 FP248Q71RG6 208 aaPredicted RBP6.72□□□□□ -1.33
MDC1-201ENST00000376406 Q75L30 129 aa6.72□□□□□ -1.33
MDC1-201ENST00000376406 FRYQ5TBA9 3013 aa6.72□□□□□ -1.33
MDC1-201ENST00000376406 M0R2T5 61 aa6.72□□□□□ -1.33
MDC1-201ENST00000376406 CDH23Q9H251 3354 aa6.72□□□□□ -1.33
MDC1-201ENST00000376406 LCA10Q71F78 164 aa6.72□□□□□ -1.33
MDC1-201ENST00000376406 UBR5O95071 2799 aaPredicted RBP6.71□□□□□ -1.33
MDC1-201ENST00000376406 Q5XG85 94 aa6.7□□□□□ -1.34
MDC1-201ENST00000376406 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
MDC1-201ENST00000376406 HRES1P13985 223 aa6.7□□□□□ -1.34
MDC1-201ENST00000376406 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
MDC1-201ENST00000376406 FLNCQ14315 2725 aa6.68□□□□□ -1.34
MDC1-201ENST00000376406 DNAH14Q0VDD8 3507 aa6.68□□□□□ -1.34
MDC1-201ENST00000376406 TNRC18O15417 2968 aaPredicted RBP6.66□□□□□ -1.34
MDC1-201ENST00000376406 ITPR1Q14643 2758 aa6.65□□□□□ -1.34
MDC1-201ENST00000376406 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.34
MDC1-201ENST00000376406 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
MDC1-201ENST00000376406 LAMA1P25391 3075 aa6.64□□□□□ -1.35
MDC1-201ENST00000376406 KRTAP1-5Q9BYS1 174 aa6.64□□□□□ -1.35
MDC1-201ENST00000376406 Q6ZR54 194 aa6.64□□□□□ -1.35
MDC1-201ENST00000376406 CSAG1Q6PB30 78 aa6.63□□□□□ -1.35
MDC1-201ENST00000376406 LINC00483Q53H64 154 aa6.63□□□□□ -1.35
MDC1-201ENST00000376406 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
MDC1-201ENST00000376406 APCP25054 2843 aa6.62□□□□□ -1.35
MDC1-201ENST00000376406 A0A0D9SG42 100 aa6.61□□□□□ -1.35
MDC1-201ENST00000376406 NBEAL2Q6ZNJ1 2754 aa6.61□□□□□ -1.35
MDC1-201ENST00000376406 LUZP6Q538Z0 58 aa6.61□□□□□ -1.35
MDC1-201ENST00000376406 KRTAP4-16G5E9R7 235 aaPredicted RBP6.6□□□□□ -1.35
MDC1-201ENST00000376406 KRTAP10-1P60331 282 aa6.6□□□□□ -1.35
MDC1-201ENST00000376406 Q5W150 140 aa6.6□□□□□ -1.35
MDC1-201ENST00000376406 CELSR3Q9NYQ7 3312 aa6.6□□□□□ -1.35
MDC1-201ENST00000376406 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
MDC1-201ENST00000376406 USP34Q70CQ2 3546 aa6.59□□□□□ -1.35
MDC1-201ENST00000376406 A0A1B0GU33 70 aa6.59□□□□□ -1.35
MDC1-201ENST00000376406 UNC80Q8N2C7 3258 aa6.58□□□□□ -1.36
MDC1-201ENST00000376406 S4R3F8 94 aa6.58□□□□□ -1.36
MDC1-201ENST00000376406 LRBAP50851 2863 aa6.57□□□□□ -1.36
MDC1-201ENST00000376406 HIVEP1P15822 2718 aa6.57□□□□□ -1.36
MDC1-201ENST00000376406 RPS29P62273 56 aaKnown RBP6.57□□□□□ -1.36
MDC1-201ENST00000376406 Q5VV11 94 aa6.57□□□□□ -1.36
MDC1-201ENST00000376406 DMXL2Q8TDJ6 3036 aa6.56□□□□□ -1.36
MDC1-201ENST00000376406 KRTAP10-2P60368 255 aa6.55□□□□□ -1.36
MDC1-201ENST00000376406 SPTBN5Q9NRC6 3674 aaKnown RBP6.54□□□□□ -1.36
MDC1-201ENST00000376406 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
MDC1-201ENST00000376406 COL6A3P12111 3177 aa6.53□□□□□ -1.36
MDC1-201ENST00000376406 SZT2Q5T011 3432 aa6.52□□□□□ -1.37
MDC1-201ENST00000376406 KALRNO60229 2985 aa6.52□□□□□ -1.37
MDC1-201ENST00000376406 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
MDC1-201ENST00000376406 COL12A1Q99715 3063 aa6.5□□□□□ -1.37
MDC1-201ENST00000376406 NBEAQ8NFP9 2946 aa6.5□□□□□ -1.37
MDC1-201ENST00000376406 ZZEF1O43149 2961 aa6.5□□□□□ -1.37
MDC1-201ENST00000376406 SPINK7P58062 85 aa6.49□□□□□ -1.37
MDC1-201ENST00000376406 CRYBG3Q68DQ2 2970 aa6.48□□□□□ -1.37
MDC1-201ENST00000376406 ASB16-AS1Q495Z4 193 aa6.48□□□□□ -1.37
MDC1-201ENST00000376406 KRTAP29-1A8MX34 341 aaPredicted RBP6.48□□□□□ -1.37
MDC1-201ENST00000376406 VCANP13611 3396 aa6.46□□□□□ -1.38
MDC1-201ENST00000376406 PANO1I0J062 215 aa6.45□□□□□ -1.38
MDC1-201ENST00000376406 BOD1L1Q8NFC6 3051 aa6.44□□□□□ -1.38
MDC1-201ENST00000376406 NIPBLQ6KC79 2804 aaeCLIP6.43□□□□□ -1.383e-8■■□□□ 11.9
MDC1-201ENST00000376406 ADGRG4Q8IZF6 3080 aa6.43□□□□□ -1.38
MDC1-201ENST00000376406 R4GN34 69 aa6.43□□□□□ -1.38
MDC1-201ENST00000376406 ATMQ13315 3056 aa6.42□□□□□ -1.38
MDC1-201ENST00000376406 H3BS24 57 aa6.42□□□□□ -1.38
MDC1-201ENST00000376406 Q6ZRN7 208 aaPredicted RBP6.41□□□□□ -1.38
MDC1-201ENST00000376406 DMXL1Q9Y485 3027 aa6.37□□□□□ -1.39
MDC1-201ENST00000376406 TENM4Q6N022 2769 aa6.37□□□□□ -1.39
MDC1-201ENST00000376406 KRTAP7-1Q8IUC3 87 aa6.36□□□□□ -1.39
MDC1-201ENST00000376406 TACC2O95359 2948 aa6.36□□□□□ -1.39
MDC1-201ENST00000376406 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
MDC1-201ENST00000376406 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms