RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 LAMA1P25391 3075 aa12.28□□□□□ -0.44
TGFBR1-201ENST00000374990 NSD1Q96L73 2696 aaPredicted RBP12.28□□□□□ -0.44
TGFBR1-201ENST00000374990 CD164Q04900 197 aa12.24□□□□□ -0.45
TGFBR1-201ENST00000374990 ATMQ13315 3056 aa12.23□□□□□ -0.45
TGFBR1-201ENST00000374990 IGLV8-61A0A075B6I0 122 aa12.22□□□□□ -0.45
TGFBR1-201ENST00000374990 ADGRG4Q8IZF6 3080 aa12.2□□□□□ -0.46
TGFBR1-201ENST00000374990 KALRNO60229 2985 aa12.2□□□□□ -0.46
TGFBR1-201ENST00000374990 KRTAP26-1Q6PEX3 210 aa12.2□□□□□ -0.46
TGFBR1-201ENST00000374990 FRYLO94915 3013 aa12.2□□□□□ -0.46
TGFBR1-201ENST00000374990 SPRR1BP22528 89 aa12.18□□□□□ -0.46
TGFBR1-201ENST00000374990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.18□□□□□ -0.46
TGFBR1-201ENST00000374990 TACC2O95359 2948 aa12.17□□□□□ -0.46
TGFBR1-201ENST00000374990 STAB2Q8WWQ8 2551 aa12.16□□□□□ -0.46
TGFBR1-201ENST00000374990 CELSR3Q9NYQ7 3312 aa12.14□□□□□ -0.47
TGFBR1-201ENST00000374990 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
TGFBR1-201ENST00000374990 TNP2Q05952 138 aa12.13□□□□□ -0.47
TGFBR1-201ENST00000374990 VCANP13611 3396 aa12.13□□□□□ -0.47
TGFBR1-201ENST00000374990 ITPR2Q14571 2701 aa12.12□□□□□ -0.47
TGFBR1-201ENST00000374990 SZT2Q5T011 3432 aa12.11□□□□□ -0.47
TGFBR1-201ENST00000374990 MIR22HGQ0VDD5 57 aa12.11□□□□□ -0.47
TGFBR1-201ENST00000374990 Q1T7F1 81 aa12.11□□□□□ -0.47
TGFBR1-201ENST00000374990 FREM2Q5SZK8 3169 aa12.1□□□□□ -0.47
TGFBR1-201ENST00000374990 IGLV7-46A0A075B6I9 117 aa12.1□□□□□ -0.47
TGFBR1-201ENST00000374990 PLAC8Q9NZF1 115 aa12.09□□□□□ -0.47
TGFBR1-201ENST00000374990 SMR3BP02814 79 aaPredicted RBP12.08□□□□□ -0.48
TGFBR1-201ENST00000374990 FAM229BQ4G0N7 80 aa12.07□□□□□ -0.48
TGFBR1-201ENST00000374990 MMP24-AS1A0A0U1RRL7 71 aa12.06□□□□□ -0.48
TGFBR1-201ENST00000374990 BOD1L1Q8NFC6 3051 aa12.06□□□□□ -0.48
TGFBR1-201ENST00000374990 LINC00472Q9H8W2 130 aa12.04□□□□□ -0.48
TGFBR1-201ENST00000374990 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
TGFBR1-201ENST00000374990 C9orf92A6NGG3 77 aa12.03□□□□□ -0.48
TGFBR1-201ENST00000374990 CYSTM1Q9H1C7 97 aa12.02□□□□□ -0.48
TGFBR1-201ENST00000374990 DMXL2Q8TDJ6 3036 aa12.02□□□□□ -0.49
TGFBR1-201ENST00000374990 KRTAP1-5Q9BYS1 174 aa12.02□□□□□ -0.49
TGFBR1-201ENST00000374990 PRR26Q8N8Z3 221 aa12.01□□□□□ -0.49
TGFBR1-201ENST00000374990 CDC42SE1Q9NRR8 79 aa12□□□□□ -0.49
TGFBR1-201ENST00000374990 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.49
TGFBR1-201ENST00000374990 ZZEF1O43149 2961 aa11.95□□□□□ -0.5
TGFBR1-201ENST00000374990 KRTAP4-16G5E9R7 235 aaPredicted RBP11.95□□□□□ -0.5
TGFBR1-201ENST00000374990 KTN1-AS1Q86SY8 53 aa11.94□□□□□ -0.5
TGFBR1-201ENST00000374990 UTP20O75691 2785 aaKnown RBP11.93□□□□□ -0.5
TGFBR1-201ENST00000374990 LRBAP50851 2863 aa11.92□□□□□ -0.5
TGFBR1-201ENST00000374990 HRES1P13985 223 aa11.91□□□□□ -0.5
TGFBR1-201ENST00000374990 Q8N1X5 172 aa11.91□□□□□ -0.5
TGFBR1-201ENST00000374990 Q5XG85 94 aa11.9□□□□□ -0.5
TGFBR1-201ENST00000374990 FP248Q71RG6 208 aaPredicted RBP11.9□□□□□ -0.5
TGFBR1-201ENST00000374990 Q8N9P0 234 aaPredicted RBP11.89□□□□□ -0.51
TGFBR1-201ENST00000374990 ASH1LQ9NR48 2969 aaKnown RBP11.87□□□□□ -0.51
TGFBR1-201ENST00000374990 HIVEP1P15822 2718 aa11.86□□□□□ -0.51
TGFBR1-201ENST00000374990 FLG2Q5D862 2391 aaPredicted RBP11.86□□□□□ -0.51
TGFBR1-201ENST00000374990 ZANQ9Y493 2812 aa11.86□□□□□ -0.51
TGFBR1-201ENST00000374990 Q75L30 129 aa11.85□□□□□ -0.51
TGFBR1-201ENST00000374990 J3QL48 77 aa11.85□□□□□ -0.51
TGFBR1-201ENST00000374990 LINC01558Q9Y6Z2 57 aa11.84□□□□□ -0.51
TGFBR1-201ENST00000374990 DNAH14Q0VDD8 3507 aa11.83□□□□□ -0.52
TGFBR1-201ENST00000374990 LCA10Q71F78 164 aa11.82□□□□□ -0.52
TGFBR1-201ENST00000374990 APCP25054 2843 aa11.81□□□□□ -0.52
TGFBR1-201ENST00000374990 KMT2BQ9UMN6 2715 aaPredicted RBP11.79□□□□□ -0.52
TGFBR1-201ENST00000374990 CELSR2Q9HCU4 2923 aa11.78□□□□□ -0.52
TGFBR1-201ENST00000374990 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
TGFBR1-201ENST00000374990 DMBT1Q9UGM3 2413 aaPredicted RBP11.77□□□□□ -0.53
TGFBR1-201ENST00000374990 LINC00483Q53H64 154 aa11.76□□□□□ -0.53
TGFBR1-201ENST00000374990 ZCCHC13Q8WW36 166 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-201ENST00000374990 CRIPTQ9P021 101 aa11.75□□□□□ -0.53
TGFBR1-201ENST00000374990 Q5W150 140 aa11.73□□□□□ -0.53
TGFBR1-201ENST00000374990 COX6B2Q6YFQ2 88 aa11.71□□□□□ -0.53
TGFBR1-201ENST00000374990 KRTAP29-1A8MX34 341 aaPredicted RBP11.71□□□□□ -0.54
TGFBR1-201ENST00000374990 SPINT4Q6UDR6 99 aa11.7□□□□□ -0.54
TGFBR1-201ENST00000374990 CFAP47Q6ZTR5 3102 aa11.7□□□□□ -0.54
TGFBR1-201ENST00000374990 OXTP01178 125 aa11.7□□□□□ -0.54
TGFBR1-201ENST00000374990 COL6A3P12111 3177 aa11.7□□□□□ -0.54
TGFBR1-201ENST00000374990 REV3LO60673 3130 aa11.68□□□□□ -0.54
TGFBR1-201ENST00000374990 Q5VV11 94 aa11.65□□□□□ -0.54
TGFBR1-201ENST00000374990 A0A1B0GU33 70 aa11.65□□□□□ -0.54
TGFBR1-201ENST00000374990 Q6ZR54 194 aa11.65□□□□□ -0.54
TGFBR1-201ENST00000374990 PANO1I0J062 215 aa11.64□□□□□ -0.55
TGFBR1-201ENST00000374990 DCHS2Q6V1P9 2916 aa11.62□□□□□ -0.55
TGFBR1-201ENST00000374990 EYSQ5T1H1 3165 aa11.6□□□□□ -0.55
TGFBR1-201ENST00000374990 TENM4Q6N022 2769 aa11.59□□□□□ -0.55
TGFBR1-201ENST00000374990 NF1P21359 2839 aa11.59□□□□□ -0.55
TGFBR1-201ENST00000374990 KRTAP10-1P60331 282 aa11.58□□□□□ -0.56
TGFBR1-201ENST00000374990 Q6ZSA8 131 aa11.56□□□□□ -0.56
TGFBR1-201ENST00000374990 KRTAP10-2P60368 255 aa11.56□□□□□ -0.56
TGFBR1-201ENST00000374990 A0A0D9SG42 100 aa11.56□□□□□ -0.56
TGFBR1-201ENST00000374990 HRNRQ86YZ3 2850 aaPredicted RBP11.55□□□□□ -0.56
TGFBR1-201ENST00000374990 DMXL1Q9Y485 3027 aa11.55□□□□□ -0.56
TGFBR1-201ENST00000374990 TNRC18O15417 2968 aaPredicted RBP11.54□□□□□ -0.56
TGFBR1-201ENST00000374990 DMAC1Q96GE9 116 aa11.54□□□□□ -0.56
TGFBR1-201ENST00000374990 SPINK7P58062 85 aa11.53□□□□□ -0.56
TGFBR1-201ENST00000374990 KRTAP7-1Q8IUC3 87 aa11.53□□□□□ -0.56
TGFBR1-201ENST00000374990 Q6ZRN7 208 aaPredicted RBP11.5□□□□□ -0.57
TGFBR1-201ENST00000374990 LCE6AA0A183 80 aa11.47□□□□□ -0.57
TGFBR1-201ENST00000374990 ASB16-AS1Q495Z4 193 aa11.45□□□□□ -0.58
TGFBR1-201ENST00000374990 KRTAP11-1Q8IUC1 163 aa11.45□□□□□ -0.58
TGFBR1-201ENST00000374990 FBN2P35556 2912 aa11.45□□□□□ -0.58
TGFBR1-201ENST00000374990 LINC01554Q52M75 96 aa11.45□□□□□ -0.58
TGFBR1-201ENST00000374990 SPEGQ15772 3267 aa11.45□□□□□ -0.58
TGFBR1-201ENST00000374990 LOC400499M0QZD8 3231 aa11.41□□□□□ -0.58
TGFBR1-201ENST00000374990 A0A087X002 238 aa11.4□□□□□ -0.58
TGFBR1-201ENST00000374990 CSAG1Q6PB30 78 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms