RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 GHRHP01286 108 aa6.6□□□□□ -1.35
HSPG2-202ENST00000374676 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
HSPG2-202ENST00000374676 BATFQ16520 125 aa6.6□□□□□ -1.35
HSPG2-202ENST00000374676 Q8NBF4 154 aa6.6□□□□□ -1.35
HSPG2-202ENST00000374676 CLEC2BQ92478 149 aa6.6□□□□□ -1.35
HSPG2-202ENST00000374676 C9orf153Q5TBE3 101 aa6.59□□□□□ -1.35
HSPG2-202ENST00000374676 C4orf48Q5BLP8 95 aa6.58□□□□□ -1.36
HSPG2-202ENST00000374676 H3BQ85 93 aa6.56□□□□□ -1.36
HSPG2-202ENST00000374676 LST1O00453 97 aa6.56□□□□□ -1.36
HSPG2-202ENST00000374676 DNAL4O96015 105 aa6.56□□□□□ -1.36
HSPG2-202ENST00000374676 TRACP01848 142 aa6.56□□□□□ -1.36
HSPG2-202ENST00000374676 SNHG12Q9BXW3 62 aa6.56□□□□□ -1.36
HSPG2-202ENST00000374676 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
HSPG2-202ENST00000374676 IGLV8-61A0A075B6I0 122 aa6.55□□□□□ -1.36
HSPG2-202ENST00000374676 F8WEM9 126 aa6.55□□□□□ -1.36
HSPG2-202ENST00000374676 TAX1BP3O14907 124 aa6.55□□□□□ -1.36
HSPG2-202ENST00000374676 SPINK1P00995 79 aa6.55□□□□□ -1.36
HSPG2-202ENST00000374676 NAA38Q9BRA0 125 aaKnown RBP6.55□□□□□ -1.36
HSPG2-202ENST00000374676 C9orf118A6NHY6 69 aa6.54□□□□□ -1.36
HSPG2-202ENST00000374676 ORMDL1Q9P0S3 153 aa6.54□□□□□ -1.36
HSPG2-202ENST00000374676 H3BUT2 72 aa6.53□□□□□ -1.36
HSPG2-202ENST00000374676 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
HSPG2-202ENST00000374676 CD164Q04900 197 aa6.53□□□□□ -1.36
HSPG2-202ENST00000374676 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
HSPG2-202ENST00000374676 TMEM256-PLSCR3K7ERE1 68 aa6.52□□□□□ -1.37
HSPG2-202ENST00000374676 TCL1BO95988 128 aa6.52□□□□□ -1.37
HSPG2-202ENST00000374676 FABP2P12104 132 aa6.52□□□□□ -1.37
HSPG2-202ENST00000374676 NDUFV3P56181 108 aaKnown RBP6.52□□□□□ -1.37
HSPG2-202ENST00000374676 ATXN8Q156A1 80 aa6.52□□□□□ -1.37
HSPG2-202ENST00000374676 Q6JHZ5 121 aa6.52□□□□□ -1.37
HSPG2-202ENST00000374676 TRBV20-1A0A075B6N2 111 aa6.51□□□□□ -1.37
HSPG2-202ENST00000374676 PCP4L1A6NKN8 68 aa6.51□□□□□ -1.37
HSPG2-202ENST00000374676 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
HSPG2-202ENST00000374676 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
HSPG2-202ENST00000374676 UBE2V1Q13404 147 aa6.49□□□□□ -1.37
HSPG2-202ENST00000374676 A0A0G2JQZ4 141 aa6.48□□□□□ -1.37
HSPG2-202ENST00000374676 H3BMG7 143 aa6.48□□□□□ -1.37
HSPG2-202ENST00000374676 BAALC-AS2P0C853 105 aa6.48□□□□□ -1.37
HSPG2-202ENST00000374676 IGFL1Q6UW32 110 aa6.48□□□□□ -1.37
HSPG2-202ENST00000374676 Q5XG85 94 aa6.47□□□□□ -1.37
HSPG2-202ENST00000374676 HRCT1Q6UXD1 115 aa6.47□□□□□ -1.37
HSPG2-202ENST00000374676 LIMD2Q9BT23 127 aa6.46□□□□□ -1.38
HSPG2-202ENST00000374676 PRR4Q16378 134 aa6.45□□□□□ -1.38
HSPG2-202ENST00000374676 RETNLBQ9BQ08 111 aa6.45□□□□□ -1.38
HSPG2-202ENST00000374676 Q6Q795 121 aa6.44□□□□□ -1.38
HSPG2-202ENST00000374676 ANKRD29Q8N6D5 301 aa6.44□□□□□ -1.38
HSPG2-202ENST00000374676 FP248Q71RG6 208 aaPredicted RBP6.43□□□□□ -1.38
HSPG2-202ENST00000374676 TRBV7-7A0A0K0K1E9 115 aa6.42□□□□□ -1.38
HSPG2-202ENST00000374676 C9JAW5 83 aa6.42□□□□□ -1.38
HSPG2-202ENST00000374676 LRP2P98164 4655 aa6.42□□□□□ -1.38
HSPG2-202ENST00000374676 TEN1Q86WV5 123 aa6.42□□□□□ -1.38
HSPG2-202ENST00000374676 RBM3P98179 157 aaKnown RBP6.41□□□□□ -1.38
HSPG2-202ENST00000374676 SPCS1Q9Y6A9 102 aa6.41□□□□□ -1.38
HSPG2-202ENST00000374676 IGLV7-46A0A075B6I9 117 aa6.4□□□□□ -1.38
HSPG2-202ENST00000374676 ASB16-AS1Q495Z4 193 aa6.4□□□□□ -1.38
HSPG2-202ENST00000374676 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
HSPG2-202ENST00000374676 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
HSPG2-202ENST00000374676 JMJD7-PLA2G4BH0Y9G9 81 aa6.39□□□□□ -1.39
HSPG2-202ENST00000374676 H3BT86 120 aa6.39□□□□□ -1.39
HSPG2-202ENST00000374676 LPAP08519 4548 aa6.38□□□□□ -1.39
HSPG2-202ENST00000374676 DSCR8Q96T75 97 aa6.38□□□□□ -1.39
HSPG2-202ENST00000374676 A0A1B0GV72 72 aa6.37□□□□□ -1.39
HSPG2-202ENST00000374676 C1orf195Q5TG92 126 aa6.37□□□□□ -1.39
HSPG2-202ENST00000374676 K7EP34 96 aa6.36□□□□□ -1.39
HSPG2-202ENST00000374676 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
HSPG2-202ENST00000374676 OBSCN-AS1Q96MR7 158 aa6.36□□□□□ -1.39
HSPG2-202ENST00000374676 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
HSPG2-202ENST00000374676 CCKP06307 115 aa6.35□□□□□ -1.39
HSPG2-202ENST00000374676 A0A087WSZ3 146 aa6.34□□□□□ -1.39
HSPG2-202ENST00000374676 PDE6GP18545 87 aa6.34□□□□□ -1.39
HSPG2-202ENST00000374676 GTF2H5Q6ZYL4 71 aa6.34□□□□□ -1.39
HSPG2-202ENST00000374676 LOC110117498A0A087WWA1 95 aa6.33□□□□□ -1.4
HSPG2-202ENST00000374676 MTURNQ8N3F0 131 aa6.33□□□□□ -1.4
HSPG2-202ENST00000374676 SMCPP49901 116 aaPredicted RBP6.32□□□□□ -1.4
HSPG2-202ENST00000374676 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
HSPG2-202ENST00000374676 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
HSPG2-202ENST00000374676 Q6ZQT0 140 aa6.32□□□□□ -1.4
HSPG2-202ENST00000374676 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
HSPG2-202ENST00000374676 UBR4Q5T4S7 5183 aa6.32□□□□□ -1.4
HSPG2-202ENST00000374676 A0A1B0GW54 56 aa6.31□□□□□ -1.4
HSPG2-202ENST00000374676 VPS25Q9BRG1 176 aa6.3□□□□□ -1.4
HSPG2-202ENST00000374676 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
HSPG2-202ENST00000374676 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
HSPG2-202ENST00000374676 Q96NJ1 140 aa6.28□□□□□ -1.4
HSPG2-202ENST00000374676 F8W1H4 67 aa6.27□□□□□ -1.41
HSPG2-202ENST00000374676 LINC00472Q9H8W2 130 aa6.26□□□□□ -1.41
HSPG2-202ENST00000374676 MUC17Q685J3 4493 aa6.24□□□□□ -1.41
HSPG2-202ENST00000374676 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
HSPG2-202ENST00000374676 C9orf92A6NGG3 77 aa6.22□□□□□ -1.41
HSPG2-202ENST00000374676 XP32Q5T750 250 aa6.22□□□□□ -1.41
HSPG2-202ENST00000374676 IGKV4-1P06312 121 aa6.21□□□□□ -1.42
HSPG2-202ENST00000374676 A0A1B0GV90 55 aa6.19□□□□□ -1.42
HSPG2-202ENST00000374676 J3KT08 172 aa6.19□□□□□ -1.42
HSPG2-202ENST00000374676 DEFB116Q30KQ4 102 aa6.19□□□□□ -1.42
HSPG2-202ENST00000374676 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
HSPG2-202ENST00000374676 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
HSPG2-202ENST00000374676 NREPQ16612 68 aa6.18□□□□□ -1.42
HSPG2-202ENST00000374676 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.42
HSPG2-202ENST00000374676 LINC00313P59037 77 aa6.14□□□□□ -1.43
HSPG2-202ENST00000374676 A0A1B0GVX0 72 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms