RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 Q8NDZ9 215 aa5.23□□□□□ -1.57
ABCA4-201ENST00000370225 RANBP2P49792 3224 aaKnown RBP5.22□□□□□ -1.57
ABCA4-201ENST00000370225 CSAG1Q6PB30 78 aa5.22□□□□□ -1.57
ABCA4-201ENST00000370225 Q8N9P0 234 aaPredicted RBP5.22□□□□□ -1.57
ABCA4-201ENST00000370225 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
ABCA4-201ENST00000370225 LINC00483Q53H64 154 aa5.2□□□□□ -1.58
ABCA4-201ENST00000370225 OCR1Q9BZK8 76 aa5.2□□□□□ -1.58
ABCA4-201ENST00000370225 LCE6AA0A183 80 aa5.2□□□□□ -1.58
ABCA4-201ENST00000370225 FLG2Q5D862 2391 aaPredicted RBP5.2□□□□□ -1.58
ABCA4-201ENST00000370225 PRUNE2Q8WUY3 3088 aa5.19□□□□□ -1.58
ABCA4-201ENST00000370225 LAMA2P24043 3122 aaKnown RBP5.19□□□□□ -1.58
ABCA4-201ENST00000370225 Q1T7F1 81 aa5.18□□□□□ -1.58
ABCA4-201ENST00000370225 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
ABCA4-201ENST00000370225 SPINK7P58062 85 aa5.18□□□□□ -1.58
ABCA4-201ENST00000370225 HTTP42858 3142 aa5.18□□□□□ -1.58
ABCA4-201ENST00000370225 MGAQ8IWI9 3026 aa5.17□□□□□ -1.58
ABCA4-201ENST00000370225 R4GN34 69 aa5.17□□□□□ -1.58
ABCA4-201ENST00000370225 CDH23Q9H251 3354 aa5.16□□□□□ -1.58
ABCA4-201ENST00000370225 Q5W150 140 aa5.16□□□□□ -1.58
ABCA4-201ENST00000370225 CENPEQ02224 2701 aa5.15□□□□□ -1.58
ABCA4-201ENST00000370225 TRIOO75962 3097 aa5.14□□□□□ -1.59
ABCA4-201ENST00000370225 A0A0C4DFX4 3053 aa5.14□□□□□ -1.59
ABCA4-201ENST00000370225 CELSR3Q9NYQ7 3312 aa5.14□□□□□ -1.59
ABCA4-201ENST00000370225 TEX15Q9BXT5 2789 aa5.13□□□□□ -1.59
ABCA4-201ENST00000370225 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
ABCA4-201ENST00000370225 UNC80Q8N2C7 3258 aa5.12□□□□□ -1.59
ABCA4-201ENST00000370225 WDFY4Q6ZS81 3184 aa5.12□□□□□ -1.59
ABCA4-201ENST00000370225 AKAP13Q12802 2813 aa5.12□□□□□ -1.59
ABCA4-201ENST00000370225 SPRR1AP35321 89 aa5.11□□□□□ -1.59
ABCA4-201ENST00000370225 CHD9Q3L8U1 2897 aa5.11□□□□□ -1.59
ABCA4-201ENST00000370225 PANO1I0J062 215 aa5.11□□□□□ -1.59
ABCA4-201ENST00000370225 CHD6Q8TD26 2715 aa5.1□□□□□ -1.59
ABCA4-201ENST00000370225 TEP1Q99973 2627 aaKnown RBP5.1□□□□□ -1.59
ABCA4-201ENST00000370225 M0QZ58 72 aa5.09□□□□□ -1.59
ABCA4-201ENST00000370225 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.59
ABCA4-201ENST00000370225 DNAH14Q0VDD8 3507 aa5.08□□□□□ -1.6
ABCA4-201ENST00000370225 Q5XG85 94 aa5.07□□□□□ -1.6
ABCA4-201ENST00000370225 KRTAP26-1Q6PEX3 210 aa5.07□□□□□ -1.6
ABCA4-201ENST00000370225 Q75L30 129 aa5.06□□□□□ -1.6
ABCA4-201ENST00000370225 ADM2Q7Z4H4 148 aa5.05□□□□□ -1.6
ABCA4-201ENST00000370225 A0A087X002 238 aa5.04□□□□□ -1.6
ABCA4-201ENST00000370225 STAB1Q9NY15 2570 aa5.04□□□□□ -1.6
ABCA4-201ENST00000370225 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
ABCA4-201ENST00000370225 SPRR1BP22528 89 aa5.04□□□□□ -1.6
ABCA4-201ENST00000370225 OXTP01178 125 aa5.02□□□□□ -1.61
ABCA4-201ENST00000370225 CYSTM1Q9H1C7 97 aa5.02□□□□□ -1.61
ABCA4-201ENST00000370225 SZT2Q5T011 3432 aa5.02□□□□□ -1.61
ABCA4-201ENST00000370225 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
ABCA4-201ENST00000370225 NBEAL1Q6ZS30 2694 aa5.02□□□□□ -1.61
ABCA4-201ENST00000370225 FREM2Q5SZK8 3169 aa5.01□□□□□ -1.61
ABCA4-201ENST00000370225 SETXQ7Z333 2677 aaKnown RBP5.01□□□□□ -1.61
ABCA4-201ENST00000370225 NDUFAF8A1L188 74 aa5.01□□□□□ -1.61
ABCA4-201ENST00000370225 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
ABCA4-201ENST00000370225 Q6ZR54 194 aa5□□□□□ -1.61
ABCA4-201ENST00000370225 TRANK1O15050 2925 aa5□□□□□ -1.61
ABCA4-201ENST00000370225 VPS13AQ96RL7 3174 aa4.99□□□□□ -1.61
ABCA4-201ENST00000370225 BAHCC1Q9P281 2608 aa4.98□□□□□ -1.61
ABCA4-201ENST00000370225 FP248Q71RG6 208 aaPredicted RBP4.98□□□□□ -1.61
ABCA4-201ENST00000370225 FRYQ5TBA9 3013 aa4.98□□□□□ -1.61
ABCA4-201ENST00000370225 GCN1Q92616 2671 aaKnown RBP4.97□□□□□ -1.61
ABCA4-201ENST00000370225 H1FX-AS1Q4G0G2 97 aa4.97□□□□□ -1.61
ABCA4-201ENST00000370225 DSPP15924 2871 aaKnown RBP4.97□□□□□ -1.61
ABCA4-201ENST00000370225 Q5VV11 94 aa4.97□□□□□ -1.61
ABCA4-201ENST00000370225 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.61
ABCA4-201ENST00000370225 UNC79Q9P2D8 2635 aa4.96□□□□□ -1.62
ABCA4-201ENST00000370225 COL6A3P12111 3177 aa4.96□□□□□ -1.62
ABCA4-201ENST00000370225 KRTAP11-1Q8IUC1 163 aa4.95□□□□□ -1.62
ABCA4-201ENST00000370225 COL6A5A8TX70 2615 aa4.95□□□□□ -1.62
ABCA4-201ENST00000370225 USP34Q70CQ2 3546 aa4.94□□□□□ -1.62
ABCA4-201ENST00000370225 ROMO1P60602 79 aa4.94□□□□□ -1.62
ABCA4-201ENST00000370225 NOTCH2NLQ7Z3S9 236 aa4.94□□□□□ -1.62
ABCA4-201ENST00000370225 VCANP13611 3396 aa4.94□□□□□ -1.62
ABCA4-201ENST00000370225 MAP1AP78559 2803 aaPredicted RBP4.94□□□□□ -1.62
ABCA4-201ENST00000370225 NBEAL2Q6ZNJ1 2754 aa4.92□□□□□ -1.62
ABCA4-201ENST00000370225 ZNF292O60281 2723 aa4.92□□□□□ -1.62
ABCA4-201ENST00000370225 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
ABCA4-201ENST00000370225 CRYBG3Q68DQ2 2970 aa4.9□□□□□ -1.63
ABCA4-201ENST00000370225 ITPR2Q14571 2701 aa4.88□□□□□ -1.63
ABCA4-201ENST00000370225 LAMA1P25391 3075 aa4.88□□□□□ -1.63
ABCA4-201ENST00000370225 IGSF10Q6WRI0 2623 aa4.88□□□□□ -1.63
ABCA4-201ENST00000370225 SPTBN5Q9NRC6 3674 aaKnown RBP4.88□□□□□ -1.63
ABCA4-201ENST00000370225 NOTCH1P46531 2555 aa4.87□□□□□ -1.63
ABCA4-201ENST00000370225 Q6ZRN7 208 aaPredicted RBP4.87□□□□□ -1.63
ABCA4-201ENST00000370225 CFAP47Q6ZTR5 3102 aa4.86□□□□□ -1.63
ABCA4-201ENST00000370225 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
ABCA4-201ENST00000370225 A8MUU9 505 aa4.86□□□□□ -1.63
ABCA4-201ENST00000370225 C20orf166-AS1Q96NR2 134 aa4.86□□□□□ -1.63
ABCA4-201ENST00000370225 KALRNO60229 2985 aa4.84□□□□□ -1.63
ABCA4-201ENST00000370225 KRTAP13-2Q52LG2 175 aa4.83□□□□□ -1.64
ABCA4-201ENST00000370225 LRBAP50851 2863 aa4.83□□□□□ -1.64
ABCA4-201ENST00000370225 A8MU10 97 aa4.83□□□□□ -1.64
ABCA4-201ENST00000370225 SPEGQ15772 3267 aa4.82□□□□□ -1.64
ABCA4-201ENST00000370225 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
ABCA4-201ENST00000370225 REV3LO60673 3130 aa4.82□□□□□ -1.64
ABCA4-201ENST00000370225 KRTAP7-1Q8IUC3 87 aa4.81□□□□□ -1.64
ABCA4-201ENST00000370225 BOD1L1Q8NFC6 3051 aa4.81□□□□□ -1.64
ABCA4-201ENST00000370225 UBR5O95071 2799 aaPredicted RBP4.79□□□□□ -1.64
ABCA4-201ENST00000370225 FRYLO94915 3013 aa4.79□□□□□ -1.64
ABCA4-201ENST00000370225 DMXL2Q8TDJ6 3036 aa4.79□□□□□ -1.64
ABCA4-201ENST00000370225 STAB2Q8WWQ8 2551 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms