RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.33
COL11A1-203ENST00000370096 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
COL11A1-203ENST00000370096 XIRP2A4UGR9 3374 aa6.69□□□□□ -1.34
COL11A1-203ENST00000370096 PLAC8Q9NZF1 115 aa6.68□□□□□ -1.34
COL11A1-203ENST00000370096 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
COL11A1-203ENST00000370096 KRTAP1-3Q8IUG1 177 aa6.66□□□□□ -1.34
COL11A1-203ENST00000370096 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
COL11A1-203ENST00000370096 SPRR1AP35321 89 aa6.64□□□□□ -1.35
COL11A1-203ENST00000370096 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
COL11A1-203ENST00000370096 KRTAP1-1Q07627 177 aa6.61□□□□□ -1.35
COL11A1-203ENST00000370096 SEC61BP60468 96 aaKnown RBP6.6□□□□□ -1.35
COL11A1-203ENST00000370096 Q6ZR54 194 aa6.59□□□□□ -1.35
COL11A1-203ENST00000370096 Q5VSD8 79 aa6.58□□□□□ -1.36
COL11A1-203ENST00000370096 A8MU10 97 aa6.57□□□□□ -1.36
COL11A1-203ENST00000370096 SPRR1BP22528 89 aa6.55□□□□□ -1.36
COL11A1-203ENST00000370096 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
COL11A1-203ENST00000370096 NDUFAF8A1L188 74 aa6.54□□□□□ -1.36
COL11A1-203ENST00000370096 CEP295Q9C0D2 2601 aa6.53□□□□□ -1.36
COL11A1-203ENST00000370096 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.36
COL11A1-203ENST00000370096 EPG5Q9HCE0 2579 aa6.51□□□□□ -1.37
COL11A1-203ENST00000370096 KRTAP10-1P60331 282 aa6.51□□□□□ -1.37
COL11A1-203ENST00000370096 MKI67P46013 3256 aaKnown RBP6.51□□□□□ -1.37
COL11A1-203ENST00000370096 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
COL11A1-203ENST00000370096 CFAP54Q96N23 3096 aa6.5□□□□□ -1.37
COL11A1-203ENST00000370096 MGAM2Q2M2H8 2515 aa6.49□□□□□ -1.37
COL11A1-203ENST00000370096 ASB16-AS1Q495Z4 193 aa6.48□□□□□ -1.37
COL11A1-203ENST00000370096 A0A087X002 238 aa6.48□□□□□ -1.37
COL11A1-203ENST00000370096 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
COL11A1-203ENST00000370096 CELSR3Q9NYQ7 3312 aa6.48□□□□□ -1.37
COL11A1-203ENST00000370096 PANO1I0J062 215 aa6.47□□□□□ -1.37
COL11A1-203ENST00000370096 A6NN06 94 aa6.47□□□□□ -1.37
COL11A1-203ENST00000370096 CFAP46Q8IYW2 2715 aa6.46□□□□□ -1.37
COL11A1-203ENST00000370096 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
COL11A1-203ENST00000370096 BRCA2P51587 3418 aa6.42□□□□□ -1.38
COL11A1-203ENST00000370096 A8MUU9 505 aa6.42□□□□□ -1.38
COL11A1-203ENST00000370096 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
COL11A1-203ENST00000370096 HECTD1Q9ULT8 2610 aa6.4□□□□□ -1.38
COL11A1-203ENST00000370096 REV3LO60673 3130 aa6.4□□□□□ -1.38
COL11A1-203ENST00000370096 LAMA2P24043 3122 aaKnown RBP6.4□□□□□ -1.38
COL11A1-203ENST00000370096 DNAH14Q0VDD8 3507 aa6.39□□□□□ -1.39
COL11A1-203ENST00000370096 FLNBO75369 2602 aaKnown RBP6.37□□□□□ -1.39
COL11A1-203ENST00000370096 AKAP13Q12802 2813 aa6.37□□□□□ -1.39
COL11A1-203ENST00000370096 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
COL11A1-203ENST00000370096 A0A0C4DFX4 3053 aa6.35□□□□□ -1.39
COL11A1-203ENST00000370096 KRTAP4-16G5E9R7 235 aaPredicted RBP6.35□□□□□ -1.39
COL11A1-203ENST00000370096 PRUNE2Q8WUY3 3088 aa6.34□□□□□ -1.39
COL11A1-203ENST00000370096 MAST4O15021 2626 aa6.32□□□□□ -1.4
COL11A1-203ENST00000370096 ATRQ13535 2644 aa6.32□□□□□ -1.4
COL11A1-203ENST00000370096 LAMA3Q16787 3333 aa6.32□□□□□ -1.4
COL11A1-203ENST00000370096 FLNAP21333 2647 aaKnown RBP6.31□□□□□ -1.4
COL11A1-203ENST00000370096 KRTAP11-1Q8IUC1 163 aa6.3□□□□□ -1.4
COL11A1-203ENST00000370096 TRIOO75962 3097 aa6.29□□□□□ -1.4
COL11A1-203ENST00000370096 HELZ2Q9BYK8 2649 aaKnown RBP6.29□□□□□ -1.4
COL11A1-203ENST00000370096 FREM2Q5SZK8 3169 aa6.28□□□□□ -1.4
COL11A1-203ENST00000370096 LCE6AA0A183 80 aa6.28□□□□□ -1.4
COL11A1-203ENST00000370096 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
COL11A1-203ENST00000370096 TEX15Q9BXT5 2789 aa6.26□□□□□ -1.41
COL11A1-203ENST00000370096 TNP1P09430 55 aa6.25□□□□□ -1.41
COL11A1-203ENST00000370096 USP34Q70CQ2 3546 aa6.23□□□□□ -1.41
COL11A1-203ENST00000370096 RANBP2P49792 3224 aaKnown RBP6.21□□□□□ -1.42
COL11A1-203ENST00000370096 UNC80Q8N2C7 3258 aa6.2□□□□□ -1.42
COL11A1-203ENST00000370096 CRYBG3Q68DQ2 2970 aa6.19□□□□□ -1.42
COL11A1-203ENST00000370096 CDH23Q9H251 3354 aa6.19□□□□□ -1.42
COL11A1-203ENST00000370096 CHD6Q8TD26 2715 aa6.18□□□□□ -1.42
COL11A1-203ENST00000370096 STAB1Q9NY15 2570 aa6.16□□□□□ -1.42
COL11A1-203ENST00000370096 SZT2Q5T011 3432 aa6.16□□□□□ -1.42
COL11A1-203ENST00000370096 WDFY4Q6ZS81 3184 aa6.16□□□□□ -1.42
COL11A1-203ENST00000370096 VPS13AQ96RL7 3174 aa6.16□□□□□ -1.42
COL11A1-203ENST00000370096 SPEGQ15772 3267 aa6.15□□□□□ -1.43
COL11A1-203ENST00000370096 CENPEQ02224 2701 aa6.14□□□□□ -1.43
COL11A1-203ENST00000370096 MGAQ8IWI9 3026 aa6.14□□□□□ -1.43
COL11A1-203ENST00000370096 KRTAP13-2Q52LG2 175 aa6.14□□□□□ -1.43
COL11A1-203ENST00000370096 NBEAL1Q6ZS30 2694 aa6.13□□□□□ -1.43
COL11A1-203ENST00000370096 COL6A3P12111 3177 aa6.13□□□□□ -1.43
COL11A1-203ENST00000370096 KRTAP7-1Q8IUC3 87 aa6.13□□□□□ -1.43
COL11A1-203ENST00000370096 KRTAP10-8P60410 259 aa6.1□□□□□ -1.43
COL11A1-203ENST00000370096 FRYQ5TBA9 3013 aa6.1□□□□□ -1.43
COL11A1-203ENST00000370096 CHD7Q9P2D1 2997 aa6.1□□□□□ -1.43
COL11A1-203ENST00000370096 HTTP42858 3142 aa6.09□□□□□ -1.43
COL11A1-203ENST00000370096 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
COL11A1-203ENST00000370096 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.44
COL11A1-203ENST00000370096 SPTBN5Q9NRC6 3674 aaKnown RBP6.09□□□□□ -1.44
COL11A1-203ENST00000370096 TEP1Q99973 2627 aaKnown RBP6.07□□□□□ -1.44
COL11A1-203ENST00000370096 COL6A5A8TX70 2615 aa6.06□□□□□ -1.44
COL11A1-203ENST00000370096 VCANP13611 3396 aa6.06□□□□□ -1.44
COL11A1-203ENST00000370096 BAHCC1Q9P281 2608 aa6.05□□□□□ -1.44
COL11A1-203ENST00000370096 CFAP47Q6ZTR5 3102 aa6.05□□□□□ -1.44
COL11A1-203ENST00000370096 SETXQ7Z333 2677 aaKnown RBP6.05□□□□□ -1.44
COL11A1-203ENST00000370096 UNC79Q9P2D8 2635 aa6.05□□□□□ -1.44
COL11A1-203ENST00000370096 Q6ZRN7 208 aaPredicted RBP6.03□□□□□ -1.44
COL11A1-203ENST00000370096 KRTAP13-1Q8IUC0 172 aa5.99□□□□□ -1.45
COL11A1-203ENST00000370096 ITPR2Q14571 2701 aa5.98□□□□□ -1.45
COL11A1-203ENST00000370096 H0YAA0 97 aa5.98□□□□□ -1.45
COL11A1-203ENST00000370096 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
COL11A1-203ENST00000370096 P0C880 135 aa5.96□□□□□ -1.46
COL11A1-203ENST00000370096 STAB2Q8WWQ8 2551 aa5.95□□□□□ -1.46
COL11A1-203ENST00000370096 KMT2BQ9UMN6 2715 aaPredicted RBP5.94□□□□□ -1.46
COL11A1-203ENST00000370096 GCN1Q92616 2671 aaKnown RBP5.94□□□□□ -1.46
COL11A1-203ENST00000370096 WDFY3Q8IZQ1 3526 aa5.92□□□□□ -1.46
COL11A1-203ENST00000370096 ASH1LQ9NR48 2969 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms