RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 NOTCH1P46531 2555 aa13.44□□□□□ -0.26
VAV3-202ENST00000370056 MIR22HGQ0VDD5 57 aa13.43□□□□□ -0.26
VAV3-202ENST00000370056 LAMA1P25391 3075 aa13.42□□□□□ -0.26
VAV3-202ENST00000370056 NBEAL2Q6ZNJ1 2754 aa13.38□□□□□ -0.27
VAV3-202ENST00000370056 SZT2Q5T011 3432 aa13.37□□□□□ -0.27
VAV3-202ENST00000370056 SPRR1BP22528 89 aa13.37□□□□□ -0.27
VAV3-202ENST00000370056 Q1T7F1 81 aa13.36□□□□□ -0.27
VAV3-202ENST00000370056 CYSTM1Q9H1C7 97 aa13.34□□□□□ -0.27
VAV3-202ENST00000370056 UBR5O95071 2799 aaPredicted RBP13.34□□□□□ -0.27
VAV3-202ENST00000370056 PLAC8Q9NZF1 115 aa13.34□□□□□ -0.27
VAV3-202ENST00000370056 IGLV7-46A0A075B6I9 117 aa13.34□□□□□ -0.27
VAV3-202ENST00000370056 CELSR3Q9NYQ7 3312 aa13.33□□□□□ -0.28
VAV3-202ENST00000370056 MMP24-AS1A0A0U1RRL7 71 aa13.33□□□□□ -0.28
VAV3-202ENST00000370056 VCANP13611 3396 aa13.31□□□□□ -0.28
VAV3-202ENST00000370056 NBEAQ8NFP9 2946 aa13.3□□□□□ -0.28
VAV3-202ENST00000370056 KRTAP1-5Q9BYS1 174 aa13.3□□□□□ -0.28
VAV3-202ENST00000370056 NBEAL1Q6ZS30 2694 aa13.29□□□□□ -0.28
VAV3-202ENST00000370056 PRR26Q8N8Z3 221 aa13.28□□□□□ -0.28
VAV3-202ENST00000370056 FLNCQ14315 2725 aa13.28□□□□□ -0.28
VAV3-202ENST00000370056 FAM229BQ4G0N7 80 aa13.27□□□□□ -0.28
VAV3-202ENST00000370056 LINC00472Q9H8W2 130 aa13.27□□□□□ -0.29
VAV3-202ENST00000370056 CDC42SE1Q9NRR8 79 aa13.27□□□□□ -0.29
VAV3-202ENST00000370056 Q8N1X5 172 aa13.26□□□□□ -0.29
VAV3-202ENST00000370056 KTN1-AS1Q86SY8 53 aa13.22□□□□□ -0.29
VAV3-202ENST00000370056 KALRNO60229 2985 aa13.21□□□□□ -0.29
VAV3-202ENST00000370056 ATMQ13315 3056 aa13.21□□□□□ -0.3
VAV3-202ENST00000370056 J3QL48 77 aa13.2□□□□□ -0.3
VAV3-202ENST00000370056 HRES1P13985 223 aa13.19□□□□□ -0.3
VAV3-202ENST00000370056 DNAH14Q0VDD8 3507 aa13.18□□□□□ -0.3
VAV3-202ENST00000370056 Q5XG85 94 aa13.18□□□□□ -0.3
VAV3-202ENST00000370056 ITPR1Q14643 2758 aa13.17□□□□□ -0.3
VAV3-202ENST00000370056 ADGRG4Q8IZF6 3080 aa13.17□□□□□ -0.3
VAV3-202ENST00000370056 FP248Q71RG6 208 aaPredicted RBP13.14□□□□□ -0.31
VAV3-202ENST00000370056 KRTAP4-16G5E9R7 235 aaPredicted RBP13.14□□□□□ -0.31
VAV3-202ENST00000370056 FRYLO94915 3013 aa13.12□□□□□ -0.31
VAV3-202ENST00000370056 FREM2Q5SZK8 3169 aa13.11□□□□□ -0.31
VAV3-202ENST00000370056 BOD1L1Q8NFC6 3051 aa13.11□□□□□ -0.31
VAV3-202ENST00000370056 Q8N9P0 234 aaPredicted RBP13.1□□□□□ -0.31
VAV3-202ENST00000370056 Q75L30 129 aa13.1□□□□□ -0.31
VAV3-202ENST00000370056 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
VAV3-202ENST00000370056 LCA10Q71F78 164 aa13.06□□□□□ -0.32
VAV3-202ENST00000370056 SPINT4Q6UDR6 99 aa13.06□□□□□ -0.32
VAV3-202ENST00000370056 LINC01558Q9Y6Z2 57 aa13.06□□□□□ -0.32
VAV3-202ENST00000370056 RBM12B-AS1Q9P1G2 102 aa13.05□□□□□ -0.32
VAV3-202ENST00000370056 COX6B2Q6YFQ2 88 aa13.04□□□□□ -0.32
VAV3-202ENST00000370056 TACC2O95359 2948 aa13.03□□□□□ -0.32
VAV3-202ENST00000370056 CRIPTQ9P021 101 aa13.02□□□□□ -0.33
VAV3-202ENST00000370056 LRBAP50851 2863 aa13.01□□□□□ -0.33
VAV3-202ENST00000370056 ITPR2Q14571 2701 aa13.01□□□□□ -0.33
VAV3-202ENST00000370056 ZCCHC13Q8WW36 166 aaKnown RBP13□□□□□ -0.33
VAV3-202ENST00000370056 DMXL2Q8TDJ6 3036 aa13□□□□□ -0.33
VAV3-202ENST00000370056 Q5W150 140 aa12.99□□□□□ -0.33
VAV3-202ENST00000370056 NSD1Q96L73 2696 aaPredicted RBP12.98□□□□□ -0.33
VAV3-202ENST00000370056 LINC00483Q53H64 154 aa12.98□□□□□ -0.33
VAV3-202ENST00000370056 OXTP01178 125 aa12.96□□□□□ -0.33
VAV3-202ENST00000370056 PANO1I0J062 215 aa12.91□□□□□ -0.34
VAV3-202ENST00000370056 A0A0D9SG42 100 aa12.91□□□□□ -0.34
VAV3-202ENST00000370056 Q5VV11 94 aa12.9□□□□□ -0.34
VAV3-202ENST00000370056 BAHCC1Q9P281 2608 aa12.9□□□□□ -0.34
VAV3-202ENST00000370056 COL6A3P12111 3177 aa12.9□□□□□ -0.35
VAV3-202ENST00000370056 UTP20O75691 2785 aaKnown RBP12.89□□□□□ -0.35
VAV3-202ENST00000370056 A0A1B0GU33 70 aa12.89□□□□□ -0.35
VAV3-202ENST00000370056 KRTAP29-1A8MX34 341 aaPredicted RBP12.88□□□□□ -0.35
VAV3-202ENST00000370056 STAB2Q8WWQ8 2551 aa12.87□□□□□ -0.35
VAV3-202ENST00000370056 KRTAP10-1P60331 282 aa12.84□□□□□ -0.35
VAV3-202ENST00000370056 KRTAP10-2P60368 255 aa12.84□□□□□ -0.35
VAV3-202ENST00000370056 Q6ZR54 194 aa12.82□□□□□ -0.36
VAV3-202ENST00000370056 Q6ZSA8 131 aa12.82□□□□□ -0.36
VAV3-202ENST00000370056 ZZEF1O43149 2961 aa12.81□□□□□ -0.36
VAV3-202ENST00000370056 LINC01554Q52M75 96 aa12.78□□□□□ -0.36
VAV3-202ENST00000370056 KRTAP7-1Q8IUC3 87 aa12.74□□□□□ -0.37
VAV3-202ENST00000370056 SPINK7P58062 85 aa12.74□□□□□ -0.37
VAV3-202ENST00000370056 ASH1LQ9NR48 2969 aaKnown RBP12.73□□□□□ -0.37
VAV3-202ENST00000370056 DMAC1Q96GE9 116 aa12.72□□□□□ -0.37
VAV3-202ENST00000370056 NIPBLQ6KC79 2804 aaeCLIP12.72□□□□□ -0.37
VAV3-202ENST00000370056 HIVEP1P15822 2718 aa12.72□□□□□ -0.37
VAV3-202ENST00000370056 APCP25054 2843 aa12.71□□□□□ -0.37
VAV3-202ENST00000370056 KRTAP11-1Q8IUC1 163 aa12.71□□□□□ -0.38
VAV3-202ENST00000370056 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
VAV3-202ENST00000370056 ZANQ9Y493 2812 aa12.68□□□□□ -0.38
VAV3-202ENST00000370056 KMT2BQ9UMN6 2715 aaPredicted RBP12.68□□□□□ -0.38
VAV3-202ENST00000370056 Q6ZRN7 208 aaPredicted RBP12.68□□□□□ -0.38
VAV3-202ENST00000370056 SPTBN5Q9NRC6 3674 aaKnown RBP12.66□□□□□ -0.38
VAV3-202ENST00000370056 EYSQ5T1H1 3165 aa12.66□□□□□ -0.38
VAV3-202ENST00000370056 LCE6AA0A183 80 aa12.64□□□□□ -0.39
VAV3-202ENST00000370056 SPEGQ15772 3267 aa12.63□□□□□ -0.39
VAV3-202ENST00000370056 A0A087X002 238 aa12.63□□□□□ -0.39
VAV3-202ENST00000370056 REV3LO60673 3130 aa12.61□□□□□ -0.39
VAV3-202ENST00000370056 CFAP47Q6ZTR5 3102 aa12.6□□□□□ -0.39
VAV3-202ENST00000370056 CSAG1Q6PB30 78 aa12.59□□□□□ -0.39
VAV3-202ENST00000370056 S4R3F8 94 aa12.59□□□□□ -0.39
VAV3-202ENST00000370056 DMXL1Q9Y485 3027 aa12.58□□□□□ -0.4
VAV3-202ENST00000370056 CELSR2Q9HCU4 2923 aa12.58□□□□□ -0.4
VAV3-202ENST00000370056 HRNRQ86YZ3 2850 aaPredicted RBP12.57□□□□□ -0.4
VAV3-202ENST00000370056 NOTCH2NLQ7Z3S9 236 aa12.57□□□□□ -0.4
VAV3-202ENST00000370056 ASB16-AS1Q495Z4 193 aa12.56□□□□□ -0.4
VAV3-202ENST00000370056 DMBT1Q9UGM3 2413 aaPredicted RBP12.56□□□□□ -0.4
VAV3-202ENST00000370056 KRTAP13-1Q8IUC0 172 aa12.53□□□□□ -0.4
VAV3-202ENST00000370056 Q5VSD8 79 aa12.52□□□□□ -0.4
VAV3-202ENST00000370056 PRAC1Q96KF2 57 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms