RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 Q5XG85 94 aa7.86□□□□□ -1.15
HCFC1-202ENST00000369984 R4GN34 69 aa7.86□□□□□ -1.15
HCFC1-202ENST00000369984 CENPEQ02224 2701 aa7.86□□□□□ -1.15
HCFC1-202ENST00000369984 CHD6Q8TD26 2715 aa7.85□□□□□ -1.15
HCFC1-202ENST00000369984 MKI67P46013 3256 aaKnown RBP7.84□□□□□ -1.16
HCFC1-202ENST00000369984 Q5VV11 94 aa7.8□□□□□ -1.16
HCFC1-202ENST00000369984 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
HCFC1-202ENST00000369984 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.79□□□□□ -1.16
HCFC1-202ENST00000369984 A0A096LNT2 108 aa7.78□□□□□ -1.16
HCFC1-202ENST00000369984 TNP2Q05952 138 aa7.78□□□□□ -1.16
HCFC1-202ENST00000369984 FP248Q71RG6 208 aaPredicted RBP7.78□□□□□ -1.16
HCFC1-202ENST00000369984 ROMO1P60602 79 aa7.77□□□□□ -1.17
HCFC1-202ENST00000369984 SEC61BP60468 96 aaKnown RBP7.73□□□□□ -1.17
HCFC1-202ENST00000369984 STAB2Q8WWQ8 2551 aa7.73□□□□□ -1.17
HCFC1-202ENST00000369984 CELSR3Q9NYQ7 3312 aa7.73□□□□□ -1.17
HCFC1-202ENST00000369984 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
HCFC1-202ENST00000369984 BAHCC1Q9P281 2608 aa7.71□□□□□ -1.17
HCFC1-202ENST00000369984 TEX15Q9BXT5 2789 aa7.71□□□□□ -1.17
HCFC1-202ENST00000369984 TRIOO75962 3097 aa7.71□□□□□ -1.18
HCFC1-202ENST00000369984 REV3LO60673 3130 aa7.7□□□□□ -1.18
HCFC1-202ENST00000369984 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
HCFC1-202ENST00000369984 FLNBO75369 2602 aaKnown RBP7.69□□□□□ -1.18
HCFC1-202ENST00000369984 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
HCFC1-202ENST00000369984 DNAH14Q0VDD8 3507 aa7.68□□□□□ -1.18
HCFC1-202ENST00000369984 RPL37P61927 97 aaKnown RBP7.67□□□□□ -1.18
HCFC1-202ENST00000369984 HELZ2Q9BYK8 2649 aaKnown RBP7.67□□□□□ -1.18
HCFC1-202ENST00000369984 GCN1Q92616 2671 aaKnown RBP7.66□□□□□ -1.18
HCFC1-202ENST00000369984 FREM2Q5SZK8 3169 aa7.66□□□□□ -1.18
HCFC1-202ENST00000369984 Q5W150 140 aa7.66□□□□□ -1.18
HCFC1-202ENST00000369984 RANBP2P49792 3224 aaKnown RBP7.65□□□□□ -1.18
HCFC1-202ENST00000369984 VPS13AQ96RL7 3174 aa7.64□□□□□ -1.19
HCFC1-202ENST00000369984 CHD7Q9P2D1 2997 aa7.63□□□□□ -1.19
HCFC1-202ENST00000369984 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
HCFC1-202ENST00000369984 M0QZ58 72 aa7.61□□□□□ -1.19
HCFC1-202ENST00000369984 KRTAP1-3Q8IUG1 177 aa7.61□□□□□ -1.19
HCFC1-202ENST00000369984 COL6A5A8TX70 2615 aa7.61□□□□□ -1.19
HCFC1-202ENST00000369984 MGAQ8IWI9 3026 aa7.59□□□□□ -1.19
HCFC1-202ENST00000369984 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
HCFC1-202ENST00000369984 UNC79Q9P2D8 2635 aa7.58□□□□□ -1.2
HCFC1-202ENST00000369984 LINC00472Q9H8W2 130 aa7.58□□□□□ -1.2
HCFC1-202ENST00000369984 MAP1AP78559 2803 aaPredicted RBP7.57□□□□□ -1.2
HCFC1-202ENST00000369984 Q8NDZ9 215 aa7.56□□□□□ -1.2
HCFC1-202ENST00000369984 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
HCFC1-202ENST00000369984 SPRR1AP35321 89 aa7.55□□□□□ -1.2
HCFC1-202ENST00000369984 Q5VSD8 79 aa7.55□□□□□ -1.2
HCFC1-202ENST00000369984 FRYQ5TBA9 3013 aa7.54□□□□□ -1.2
HCFC1-202ENST00000369984 ASB16-AS1Q495Z4 193 aa7.54□□□□□ -1.2
HCFC1-202ENST00000369984 BRCA2P51587 3418 aa7.54□□□□□ -1.2
HCFC1-202ENST00000369984 KMT2BQ9UMN6 2715 aaPredicted RBP7.54□□□□□ -1.2
HCFC1-202ENST00000369984 NDUFAF8A1L188 74 aa7.54□□□□□ -1.2
HCFC1-202ENST00000369984 KRTAP1-1Q07627 177 aa7.53□□□□□ -1.2
HCFC1-202ENST00000369984 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
HCFC1-202ENST00000369984 PRUNE2Q8WUY3 3088 aa7.52□□□□□ -1.21
HCFC1-202ENST00000369984 OXTP01178 125 aa7.51□□□□□ -1.21
HCFC1-202ENST00000369984 LAMA3Q16787 3333 aa7.51□□□□□ -1.21
HCFC1-202ENST00000369984 APCP25054 2843 aa7.49□□□□□ -1.21
HCFC1-202ENST00000369984 KRTAP26-1Q6PEX3 210 aa7.47□□□□□ -1.21
HCFC1-202ENST00000369984 TRANK1O15050 2925 aa7.46□□□□□ -1.21
HCFC1-202ENST00000369984 ADM2Q7Z4H4 148 aa7.46□□□□□ -1.22
HCFC1-202ENST00000369984 ITPR2Q14571 2701 aa7.45□□□□□ -1.22
HCFC1-202ENST00000369984 WDFY4Q6ZS81 3184 aa7.45□□□□□ -1.22
HCFC1-202ENST00000369984 CDH23Q9H251 3354 aa7.44□□□□□ -1.22
HCFC1-202ENST00000369984 SPRR1BP22528 89 aa7.44□□□□□ -1.22
HCFC1-202ENST00000369984 KALRNO60229 2985 aa7.44□□□□□ -1.22
HCFC1-202ENST00000369984 UNC80Q8N2C7 3258 aa7.44□□□□□ -1.22
HCFC1-202ENST00000369984 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
HCFC1-202ENST00000369984 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
HCFC1-202ENST00000369984 DSPP15924 2871 aaKnown RBP7.41□□□□□ -1.22
HCFC1-202ENST00000369984 Q6ZR54 194 aa7.41□□□□□ -1.22
HCFC1-202ENST00000369984 TEP1Q99973 2627 aaKnown RBP7.4□□□□□ -1.23
HCFC1-202ENST00000369984 LRBAP50851 2863 aa7.36□□□□□ -1.23
HCFC1-202ENST00000369984 NSD1Q96L73 2696 aaPredicted RBP7.35□□□□□ -1.23
HCFC1-202ENST00000369984 LAMA1P25391 3075 aa7.35□□□□□ -1.23
HCFC1-202ENST00000369984 KRTAP1-5Q9BYS1 174 aa7.33□□□□□ -1.24
HCFC1-202ENST00000369984 PANO1I0J062 215 aa7.32□□□□□ -1.24
HCFC1-202ENST00000369984 ZNF292O60281 2723 aa7.32□□□□□ -1.24
HCFC1-202ENST00000369984 SETXQ7Z333 2677 aaKnown RBP7.3□□□□□ -1.24
HCFC1-202ENST00000369984 A6NN06 94 aa7.29□□□□□ -1.24
HCFC1-202ENST00000369984 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
HCFC1-202ENST00000369984 USP34Q70CQ2 3546 aa7.29□□□□□ -1.24
HCFC1-202ENST00000369984 SZT2Q5T011 3432 aa7.29□□□□□ -1.24
HCFC1-202ENST00000369984 VCANP13611 3396 aa7.29□□□□□ -1.24
HCFC1-202ENST00000369984 KRTAP10-1P60331 282 aa7.28□□□□□ -1.24
HCFC1-202ENST00000369984 HTTP42858 3142 aa7.27□□□□□ -1.25
HCFC1-202ENST00000369984 KRTAP10-2P60368 255 aa7.27□□□□□ -1.25
HCFC1-202ENST00000369984 COL6A3P12111 3177 aa7.26□□□□□ -1.25
HCFC1-202ENST00000369984 IGSF10Q6WRI0 2623 aa7.26□□□□□ -1.25
HCFC1-202ENST00000369984 A8MU10 97 aa7.26□□□□□ -1.25
HCFC1-202ENST00000369984 LCE6AA0A183 80 aa7.26□□□□□ -1.25
HCFC1-202ENST00000369984 FRYLO94915 3013 aa7.25□□□□□ -1.25
HCFC1-202ENST00000369984 ASH1LQ9NR48 2969 aaKnown RBP7.24□□□□□ -1.25
HCFC1-202ENST00000369984 ITPR1Q14643 2758 aa7.24□□□□□ -1.25
HCFC1-202ENST00000369984 KRTAP29-1A8MX34 341 aaPredicted RBP7.23□□□□□ -1.25
HCFC1-202ENST00000369984 KRTAP4-16G5E9R7 235 aaPredicted RBP7.23□□□□□ -1.25
HCFC1-202ENST00000369984 CHD9Q3L8U1 2897 aa7.23□□□□□ -1.25
HCFC1-202ENST00000369984 A8MUU9 505 aa7.21□□□□□ -1.25
HCFC1-202ENST00000369984 A0A087X002 238 aa7.21□□□□□ -1.26
HCFC1-202ENST00000369984 UTP20O75691 2785 aaKnown RBP7.21□□□□□ -1.26
HCFC1-202ENST00000369984 TNP1P09430 55 aa7.19□□□□□ -1.26
HCFC1-202ENST00000369984 SPEGQ15772 3267 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 351.3 ms