RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 KMT2BQ9UMN6 2715 aaPredicted RBP7.46□□□□□ -1.22
GFRA1-203ENST00000369236 NOTCH1P46531 2555 aa7.46□□□□□ -1.22
GFRA1-203ENST00000369236 LINC00472Q9H8W2 130 aa7.45□□□□□ -1.22
GFRA1-203ENST00000369236 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
GFRA1-203ENST00000369236 ITPR3Q14573 2671 aa7.44□□□□□ -1.22
GFRA1-203ENST00000369236 A6NN06 94 aa7.44□□□□□ -1.22
GFRA1-203ENST00000369236 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
GFRA1-203ENST00000369236 Q6ZR54 194 aa7.43□□□□□ -1.22
GFRA1-203ENST00000369236 HELZ2Q9BYK8 2649 aaKnown RBP7.42□□□□□ -1.22
GFRA1-203ENST00000369236 A0A087X002 238 aa7.41□□□□□ -1.22
GFRA1-203ENST00000369236 STAB2Q8WWQ8 2551 aa7.38□□□□□ -1.23
GFRA1-203ENST00000369236 UNC79Q9P2D8 2635 aa7.38□□□□□ -1.23
GFRA1-203ENST00000369236 KRTAP10-11P60412 298 aa7.38□□□□□ -1.23
GFRA1-203ENST00000369236 SPRR1AP35321 89 aa7.38□□□□□ -1.23
GFRA1-203ENST00000369236 COL6A5A8TX70 2615 aa7.37□□□□□ -1.23
GFRA1-203ENST00000369236 KRTAP24-1Q3LI83 254 aa7.35□□□□□ -1.23
GFRA1-203ENST00000369236 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
GFRA1-203ENST00000369236 SPRR1BP22528 89 aa7.34□□□□□ -1.24
GFRA1-203ENST00000369236 K7EIL1 84 aa7.33□□□□□ -1.24
GFRA1-203ENST00000369236 NDUFAF8A1L188 74 aa7.33□□□□□ -1.24
GFRA1-203ENST00000369236 M0R2T5 61 aa7.32□□□□□ -1.24
GFRA1-203ENST00000369236 CASC10Q5T4H9 136 aa7.32□□□□□ -1.24
GFRA1-203ENST00000369236 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
GFRA1-203ENST00000369236 M0QZ58 72 aa7.3□□□□□ -1.24
GFRA1-203ENST00000369236 APCP25054 2843 aa7.28□□□□□ -1.24
GFRA1-203ENST00000369236 TEX15Q9BXT5 2789 aa7.28□□□□□ -1.24
GFRA1-203ENST00000369236 KRTAP26-1Q6PEX3 210 aa7.27□□□□□ -1.25
GFRA1-203ENST00000369236 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
GFRA1-203ENST00000369236 EP400Q96L91 3159 aa7.23□□□□□ -1.25
GFRA1-203ENST00000369236 PANO1I0J062 215 aa7.23□□□□□ -1.25
GFRA1-203ENST00000369236 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
GFRA1-203ENST00000369236 Q8NDZ9 215 aa7.22□□□□□ -1.25
GFRA1-203ENST00000369236 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.26
GFRA1-203ENST00000369236 DNAH12Q6ZR08 3092 aa7.2□□□□□ -1.26
GFRA1-203ENST00000369236 KRTAP29-1A8MX34 341 aaPredicted RBP7.17□□□□□ -1.26
GFRA1-203ENST00000369236 CEP350Q5VT06 3117 aa7.16□□□□□ -1.26
GFRA1-203ENST00000369236 LCE6AA0A183 80 aa7.15□□□□□ -1.27
GFRA1-203ENST00000369236 FLNBO75369 2602 aaKnown RBP7.14□□□□□ -1.27
GFRA1-203ENST00000369236 PCNTO95613 3336 aa7.12□□□□□ -1.27
GFRA1-203ENST00000369236 ITPR1Q14643 2758 aa7.12□□□□□ -1.27
GFRA1-203ENST00000369236 KRTAP10-3P60369 221 aa7.11□□□□□ -1.27
GFRA1-203ENST00000369236 CFAP54Q96N23 3096 aa7.11□□□□□ -1.27
GFRA1-203ENST00000369236 NSD1Q96L73 2696 aaPredicted RBP7.1□□□□□ -1.27
GFRA1-203ENST00000369236 ITPR2Q14571 2701 aa7.1□□□□□ -1.27
GFRA1-203ENST00000369236 BAHCC1Q9P281 2608 aa7.1□□□□□ -1.27
GFRA1-203ENST00000369236 UTP20O75691 2785 aaKnown RBP7.09□□□□□ -1.27
GFRA1-203ENST00000369236 TEP1Q99973 2627 aaKnown RBP7.09□□□□□ -1.27
GFRA1-203ENST00000369236 A8MUU9 505 aa7.06□□□□□ -1.28
GFRA1-203ENST00000369236 MAP1AP78559 2803 aaPredicted RBP7.05□□□□□ -1.28
GFRA1-203ENST00000369236 A0A0C4DFX4 3053 aa7.03□□□□□ -1.28
GFRA1-203ENST00000369236 NBEAL2Q6ZNJ1 2754 aa7.03□□□□□ -1.28
GFRA1-203ENST00000369236 KRTAP4-16G5E9R7 235 aaPredicted RBP7.02□□□□□ -1.29
GFRA1-203ENST00000369236 PP632Q6XCG6 107 aa7.02□□□□□ -1.29
GFRA1-203ENST00000369236 UBR5O95071 2799 aaPredicted RBP7□□□□□ -1.29
GFRA1-203ENST00000369236 C5orf42Q9H799 3197 aa7□□□□□ -1.29
GFRA1-203ENST00000369236 KRTAP11-1Q8IUC1 163 aa6.99□□□□□ -1.29
GFRA1-203ENST00000369236 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
GFRA1-203ENST00000369236 ZNF292O60281 2723 aa6.98□□□□□ -1.29
GFRA1-203ENST00000369236 SETXQ7Z333 2677 aaKnown RBP6.97□□□□□ -1.29
GFRA1-203ENST00000369236 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
GFRA1-203ENST00000369236 A8MU10 97 aa6.97□□□□□ -1.29
GFRA1-203ENST00000369236 UTRNP46939 3433 aa6.96□□□□□ -1.3
GFRA1-203ENST00000369236 IGSF10Q6WRI0 2623 aa6.95□□□□□ -1.3
GFRA1-203ENST00000369236 DSPP15924 2871 aaKnown RBP6.94□□□□□ -1.3
GFRA1-203ENST00000369236 TNP1P09430 55 aa6.93□□□□□ -1.3
GFRA1-203ENST00000369236 LRBAP50851 2863 aa6.91□□□□□ -1.3
GFRA1-203ENST00000369236 GOLGB1Q14789 3259 aaKnown RBP6.89□□□□□ -1.31
GFRA1-203ENST00000369236 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
GFRA1-203ENST00000369236 LAMA2P24043 3122 aaKnown RBP6.83□□□□□ -1.32
GFRA1-203ENST00000369236 KRTAP1-3Q8IUG1 177 aa6.83□□□□□ -1.32
GFRA1-203ENST00000369236 Q5VSD8 79 aa6.81□□□□□ -1.32
GFRA1-203ENST00000369236 TRANK1O15050 2925 aa6.81□□□□□ -1.32
GFRA1-203ENST00000369236 KRTAP1-1Q07627 177 aa6.79□□□□□ -1.32
GFRA1-203ENST00000369236 KRTAP1-5Q9BYS1 174 aa6.77□□□□□ -1.33
GFRA1-203ENST00000369236 FRYQ5TBA9 3013 aa6.77□□□□□ -1.33
GFRA1-203ENST00000369236 P0C880 135 aa6.76□□□□□ -1.33
GFRA1-203ENST00000369236 KALRNO60229 2985 aa6.71□□□□□ -1.33
GFRA1-203ENST00000369236 FRYLO94915 3013 aa6.7□□□□□ -1.34
GFRA1-203ENST00000369236 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
GFRA1-203ENST00000369236 MGAQ8IWI9 3026 aa6.68□□□□□ -1.34
GFRA1-203ENST00000369236 H0YAA0 97 aa6.65□□□□□ -1.35
GFRA1-203ENST00000369236 TRIOO75962 3097 aa6.64□□□□□ -1.35
GFRA1-203ENST00000369236 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
GFRA1-203ENST00000369236 KRTAP10-2P60368 255 aa6.62□□□□□ -1.35
GFRA1-203ENST00000369236 ASH1LQ9NR48 2969 aaKnown RBP6.62□□□□□ -1.35
GFRA1-203ENST00000369236 VPS13AQ96RL7 3174 aa6.61□□□□□ -1.35
GFRA1-203ENST00000369236 CHD9Q3L8U1 2897 aa6.59□□□□□ -1.35
GFRA1-203ENST00000369236 TGP01266 2768 aa6.58□□□□□ -1.36
GFRA1-203ENST00000369236 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
GFRA1-203ENST00000369236 FREM2Q5SZK8 3169 aa6.56□□□□□ -1.36
GFRA1-203ENST00000369236 REV3LO60673 3130 aa6.55□□□□□ -1.36
GFRA1-203ENST00000369236 TENM3Q9P273 2699 aa6.55□□□□□ -1.36
GFRA1-203ENST00000369236 CHD7Q9P2D1 2997 aa6.55□□□□□ -1.36
GFRA1-203ENST00000369236 WDFY4Q6ZS81 3184 aa6.52□□□□□ -1.36
GFRA1-203ENST00000369236 RANBP2P49792 3224 aaKnown RBP6.52□□□□□ -1.37
GFRA1-203ENST00000369236 TACC2O95359 2948 aa6.52□□□□□ -1.37
GFRA1-203ENST00000369236 HIVEP1P15822 2718 aa6.51□□□□□ -1.37
GFRA1-203ENST00000369236 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
GFRA1-203ENST00000369236 COL12A1Q99715 3063 aa6.48□□□□□ -1.37
GFRA1-203ENST00000369236 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms