RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 FASNP49327 2511 aaKnown RBP10.03□□□□□ -0.8
NID1-202ENST00000366595 DNAH12Q6ZR08 3092 aa10.03□□□□□ -0.8
NID1-202ENST00000366595 KRTAP1-3Q8IUG1 177 aa10.02□□□□□ -0.81
NID1-202ENST00000366595 PRRC2CQ9Y520 2896 aaKnown RBP10.01□□□□□ -0.81
NID1-202ENST00000366595 KRTAP1-1Q07627 177 aa10.01□□□□□ -0.81
NID1-202ENST00000366595 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
NID1-202ENST00000366595 KRTAP29-1A8MX34 341 aaPredicted RBP9.96□□□□□ -0.82
NID1-202ENST00000366595 KRTAP25-1Q3LHN0 102 aa9.96□□□□□ -0.82
NID1-202ENST00000366595 USP24Q9UPU5 2620 aa9.96□□□□□ -0.82
NID1-202ENST00000366595 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
NID1-202ENST00000366595 MGAM2Q2M2H8 2515 aa9.93□□□□□ -0.82
NID1-202ENST00000366595 PANO1I0J062 215 aa9.93□□□□□ -0.82
NID1-202ENST00000366595 BPTFQ12830 3046 aa9.92□□□□□ -0.82
NID1-202ENST00000366595 A6NN06 94 aa9.9□□□□□ -0.82
NID1-202ENST00000366595 CEP350Q5VT06 3117 aa9.86□□□□□ -0.83
NID1-202ENST00000366595 KRTAP4-16G5E9R7 235 aaPredicted RBP9.8□□□□□ -0.84
NID1-202ENST00000366595 A0A087X002 238 aa9.79□□□□□ -0.84
NID1-202ENST00000366595 Q5VSD8 79 aa9.78□□□□□ -0.84
NID1-202ENST00000366595 C20orf166-AS1Q96NR2 134 aa9.78□□□□□ -0.84
NID1-202ENST00000366595 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
NID1-202ENST00000366595 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
NID1-202ENST00000366595 NDUFAF8A1L188 74 aa9.73□□□□□ -0.85
NID1-202ENST00000366595 PCNTO95613 3336 aa9.72□□□□□ -0.85
NID1-202ENST00000366595 EPG5Q9HCE0 2579 aa9.71□□□□□ -0.85
NID1-202ENST00000366595 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
NID1-202ENST00000366595 LCE6AA0A183 80 aa9.7□□□□□ -0.86
NID1-202ENST00000366595 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
NID1-202ENST00000366595 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
NID1-202ENST00000366595 A8MUU9 505 aa9.63□□□□□ -0.87
NID1-202ENST00000366595 A8MU10 97 aa9.62□□□□□ -0.87
NID1-202ENST00000366595 STAB1Q9NY15 2570 aa9.59□□□□□ -0.87
NID1-202ENST00000366595 KRTAP10-2P60368 255 aa9.59□□□□□ -0.87
NID1-202ENST00000366595 NOTCH2NLQ7Z3S9 236 aa9.59□□□□□ -0.87
NID1-202ENST00000366595 ATRQ13535 2644 aa9.58□□□□□ -0.88
NID1-202ENST00000366595 UTRNP46939 3433 aa9.56□□□□□ -0.88
NID1-202ENST00000366595 C5orf42Q9H799 3197 aa9.56□□□□□ -0.88
NID1-202ENST00000366595 TNP1P09430 55 aa9.55□□□□□ -0.88
NID1-202ENST00000366595 FLNBO75369 2602 aaKnown RBP9.54□□□□□ -0.88
NID1-202ENST00000366595 MAST4O15021 2626 aa9.54□□□□□ -0.88
NID1-202ENST00000366595 HECTD1Q9ULT8 2610 aa9.53□□□□□ -0.88
NID1-202ENST00000366595 CHD7Q9P2D1 2997 aa9.5□□□□□ -0.89
NID1-202ENST00000366595 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
NID1-202ENST00000366595 PP632Q6XCG6 107 aa9.47□□□□□ -0.89
NID1-202ENST00000366595 CFAP54Q96N23 3096 aa9.45□□□□□ -0.9
NID1-202ENST00000366595 FLNAP21333 2647 aaKnown RBP9.44□□□□□ -0.9
NID1-202ENST00000366595 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
NID1-202ENST00000366595 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
NID1-202ENST00000366595 ITPR3Q14573 2671 aa9.33□□□□□ -0.92
NID1-202ENST00000366595 STAB2Q8WWQ8 2551 aa9.32□□□□□ -0.92
NID1-202ENST00000366595 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
NID1-202ENST00000366595 KRTAP13-1Q8IUC0 172 aa9.28□□□□□ -0.92
NID1-202ENST00000366595 CHD9Q3L8U1 2897 aa9.28□□□□□ -0.92
NID1-202ENST00000366595 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
NID1-202ENST00000366595 LAMA2P24043 3122 aaKnown RBP9.25□□□□□ -0.93
NID1-202ENST00000366595 HTTP42858 3142 aa9.2□□□□□ -0.94
NID1-202ENST00000366595 KRTAP7-1Q8IUC3 87 aa9.2□□□□□ -0.94
NID1-202ENST00000366595 AKAP13Q12802 2813 aa9.19□□□□□ -0.94
NID1-202ENST00000366595 CENPEQ02224 2701 aa9.16□□□□□ -0.94
NID1-202ENST00000366595 P0C880 135 aa9.16□□□□□ -0.94
NID1-202ENST00000366595 HELZ2Q9BYK8 2649 aaKnown RBP9.15□□□□□ -0.94
NID1-202ENST00000366595 CHD6Q8TD26 2715 aa9.15□□□□□ -0.95
NID1-202ENST00000366595 MKI67P46013 3256 aaKnown RBP9.14□□□□□ -0.95
NID1-202ENST00000366595 CFAP46Q8IYW2 2715 aa9.12□□□□□ -0.95
NID1-202ENST00000366595 GCN1Q92616 2671 aaKnown RBP9.08□□□□□ -0.96
NID1-202ENST00000366595 RANBP2P49792 3224 aaKnown RBP9.07□□□□□ -0.96
NID1-202ENST00000366595 MGAQ8IWI9 3026 aa9.07□□□□□ -0.96
NID1-202ENST00000366595 NOTCH1P46531 2555 aa9.07□□□□□ -0.96
NID1-202ENST00000366595 UNC79Q9P2D8 2635 aa9.06□□□□□ -0.96
NID1-202ENST00000366595 TRANK1O15050 2925 aa9.06□□□□□ -0.96
NID1-202ENST00000366595 TRIOO75962 3097 aa9.04□□□□□ -0.96
NID1-202ENST00000366595 KRTAP10-8P60410 259 aa9□□□□□ -0.97
NID1-202ENST00000366595 FREM2Q5SZK8 3169 aa8.98□□□□□ -0.97
NID1-202ENST00000366595 LAMA3Q16787 3333 aa8.97□□□□□ -0.97
NID1-202ENST00000366595 FRYQ5TBA9 3013 aa8.97□□□□□ -0.97
NID1-202ENST00000366595 H0YAA0 97 aa8.96□□□□□ -0.97
NID1-202ENST00000366595 TEP1Q99973 2627 aaKnown RBP8.94□□□□□ -0.98
NID1-202ENST00000366595 NBEAL2Q6ZNJ1 2754 aa8.93□□□□□ -0.98
NID1-202ENST00000366595 WDFY4Q6ZS81 3184 aa8.93□□□□□ -0.98
NID1-202ENST00000366595 BRCA2P51587 3418 aa8.91□□□□□ -0.98
NID1-202ENST00000366595 UNC80Q8N2C7 3258 aa8.9□□□□□ -0.98
NID1-202ENST00000366595 VPS13AQ96RL7 3174 aa8.89□□□□□ -0.99
NID1-202ENST00000366595 NBEAQ8NFP9 2946 aa8.88□□□□□ -0.99
NID1-202ENST00000366595 TEX15Q9BXT5 2789 aa8.88□□□□□ -0.99
NID1-202ENST00000366595 DSPP15924 2871 aaKnown RBP8.87□□□□□ -0.99
NID1-202ENST00000366595 MAP1AP78559 2803 aaPredicted RBP8.86□□□□□ -0.99
NID1-202ENST00000366595 PRO2289Q9P1D8 64 aa8.83□□□□□ -1
NID1-202ENST00000366595 COL6A5A8TX70 2615 aa8.82□□□□□ -1
NID1-202ENST00000366595 XP32Q5T750 250 aa8.82□□□□□ -1
NID1-202ENST00000366595 XIRP2A4UGR9 3374 aa8.81□□□□□ -1
NID1-202ENST00000366595 KALRNO60229 2985 aa8.81□□□□□ -1
NID1-202ENST00000366595 CELSR3Q9NYQ7 3312 aa8.78□□□□□ -1
NID1-202ENST00000366595 SETXQ7Z333 2677 aaKnown RBP8.76□□□□□ -1.01
NID1-202ENST00000366595 ZNF292O60281 2723 aa8.75□□□□□ -1.01
NID1-202ENST00000366595 PRUNE2Q8WUY3 3088 aa8.74□□□□□ -1.01
NID1-202ENST00000366595 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
NID1-202ENST00000366595 ITPR1Q14643 2758 aa8.7□□□□□ -1.02
NID1-202ENST00000366595 TPRXLQ17RH7 258 aa8.68□□□□□ -1.02
NID1-202ENST00000366595 DNAH14Q0VDD8 3507 aa8.68□□□□□ -1.02
NID1-202ENST00000366595 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
NID1-202ENST00000366595 BAHCC1Q9P281 2608 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms