RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 PAPPA-AS1Q5QFB9 102 aa4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 MRPL55Q7Z7F7 128 aaKnown RBP4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 LINC00643Q86TS7 51 aa4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 LINC00167Q96N53 147 aa4.7□□□□□ -1.66
HMGB1P39-201ENST00000366304 TRAV12-1A0A0B4J245 112 aa4.69□□□□□ -1.66
HMGB1P39-201ENST00000366304 TRBV30A0A0K0K1B3 111 aa4.69□□□□□ -1.66
HMGB1P39-201ENST00000366304 TRBV10-2A0A0K0K1G8 114 aa4.69□□□□□ -1.66
HMGB1P39-201ENST00000366304 K7ERJ3 54 aa4.69□□□□□ -1.66
HMGB1P39-201ENST00000366304 SMIM2Q9BVW6 85 aa4.69□□□□□ -1.66
HMGB1P39-201ENST00000366304 K7EMI3 77 aa4.68□□□□□ -1.66
HMGB1P39-201ENST00000366304 MRPS36P82909 103 aaKnown RBP4.68□□□□□ -1.66
HMGB1P39-201ENST00000366304 ZC2HC1BQ5TFG8 222 aa4.68□□□□□ -1.66
HMGB1P39-201ENST00000366304 TIMM21Q9BVV7 248 aa4.68□□□□□ -1.66
HMGB1P39-201ENST00000366304 PRO1854Q9UHT4 67 aa4.68□□□□□ -1.66
HMGB1P39-201ENST00000366304 A0A096LNJ9 63 aa4.67□□□□□ -1.66
HMGB1P39-201ENST00000366304 TCL1BO95988 128 aa4.67□□□□□ -1.66
HMGB1P39-201ENST00000366304 COX6CP09669 75 aa4.67□□□□□ -1.66
HMGB1P39-201ENST00000366304 IFI27P40305 119 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P39-201ENST00000366304 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
HMGB1P39-201ENST00000366304 LOC389332A0A1B0GUA5 103 aa4.66□□□□□ -1.66
HMGB1P39-201ENST00000366304 Q8N8P6 123 aa4.66□□□□□ -1.66
HMGB1P39-201ENST00000366304 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
HMGB1P39-201ENST00000366304 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P39-201ENST00000366304 UBE2AP49459 152 aa4.65□□□□□ -1.67
HMGB1P39-201ENST00000366304 HERVK_113P61574 105 aa4.65□□□□□ -1.67
HMGB1P39-201ENST00000366304 PRLHP81277 87 aa4.65□□□□□ -1.67
HMGB1P39-201ENST00000366304 DAND5Q8N907 189 aa4.65□□□□□ -1.67
HMGB1P39-201ENST00000366304 A0A0B4J2C4 111 aa4.64□□□□□ -1.67
HMGB1P39-201ENST00000366304 FAM236AA0A1B0GUQ0 79 aa4.64□□□□□ -1.67
HMGB1P39-201ENST00000366304 FAM236BA0A1B0GV22 79 aa4.64□□□□□ -1.67
HMGB1P39-201ENST00000366304 M0R2T5 61 aa4.64□□□□□ -1.67
HMGB1P39-201ENST00000366304 C1orf195Q5TG92 126 aa4.64□□□□□ -1.67
HMGB1P39-201ENST00000366304 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 F8VRH5 84 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 CFC1P0CG37 223 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 ORMDL2Q53FV1 153 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 PCOTHQ58A44 107 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 Q5XG85 94 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 SPAG11AQ6PDA7 123 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 SERP2Q8N6R1 65 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 PYGO1Q9Y3Y4 419 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
HMGB1P39-201ENST00000366304 C4orf26Q17RF5 130 aa4.62□□□□□ -1.67
HMGB1P39-201ENST00000366304 HRCT1Q6UXD1 115 aa4.62□□□□□ -1.67
HMGB1P39-201ENST00000366304 SCGB1D4Q6XE38 83 aa4.62□□□□□ -1.67
HMGB1P39-201ENST00000366304 Q8NBF4 154 aa4.62□□□□□ -1.67
HMGB1P39-201ENST00000366304 IGLV8-61A0A075B6I0 122 aa4.61□□□□□ -1.67
HMGB1P39-201ENST00000366304 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
HMGB1P39-201ENST00000366304 IGKV2-28A0A075B6P5 120 aa4.61□□□□□ -1.67
HMGB1P39-201ENST00000366304 IGKV2D-28P01615 120 aa4.61□□□□□ -1.67
HMGB1P39-201ENST00000366304 PFN2P35080 140 aa4.61□□□□□ -1.67
HMGB1P39-201ENST00000366304 NPC2P61916 151 aa4.61□□□□□ -1.67
HMGB1P39-201ENST00000366304 HIST1H4AP62805 103 aaKnown RBP4.61□□□□□ -1.67
HMGB1P39-201ENST00000366304 C2orf66Q6UXQ4 117 aa4.61□□□□□ -1.67
HMGB1P39-201ENST00000366304 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
HMGB1P39-201ENST00000366304 IGLV4-3A0A075B6K6 122 aa4.6□□□□□ -1.67
HMGB1P39-201ENST00000366304 J3QQQ9 107 aa4.6□□□□□ -1.67
HMGB1P39-201ENST00000366304 ATP5EP56381 51 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P39-201ENST00000366304 Q8N377 158 aa4.6□□□□□ -1.67
HMGB1P39-201ENST00000366304 TOMM6Q96B49 74 aa4.6□□□□□ -1.67
HMGB1P39-201ENST00000366304 TMEM141Q96I45 108 aa4.6□□□□□ -1.67
HMGB1P39-201ENST00000366304 TOMM7Q9P0U1 55 aa4.6□□□□□ -1.67
HMGB1P39-201ENST00000366304 IGIPA6NJ69 53 aa4.59□□□□□ -1.67
HMGB1P39-201ENST00000366304 ZNF815PA8K554 130 aa4.59□□□□□ -1.67
HMGB1P39-201ENST00000366304 SPRR4Q96PI1 79 aa4.59□□□□□ -1.67
HMGB1P39-201ENST00000366304 M0R378 163 aa4.58□□□□□ -1.68
HMGB1P39-201ENST00000366304 FAM19A1Q7Z5A9 133 aa4.58□□□□□ -1.68
HMGB1P39-201ENST00000366304 LINC01561Q8N1V8 128 aa4.58□□□□□ -1.68
HMGB1P39-201ENST00000366304 TIMM17AQ99595 171 aa4.58□□□□□ -1.68
HMGB1P39-201ENST00000366304 TEX49A0A1B0GTD5 131 aa4.57□□□□□ -1.68
HMGB1P39-201ENST00000366304 hADV29S1A0JD25 119 aa4.57□□□□□ -1.68
HMGB1P39-201ENST00000366304 S100A7L2Q5SY68 101 aa4.57□□□□□ -1.68
HMGB1P39-201ENST00000366304 Q8IZM0 81 aa4.57□□□□□ -1.68
HMGB1P39-201ENST00000366304 Q8NDZ9 215 aa4.57□□□□□ -1.68
HMGB1P39-201ENST00000366304 SCGB3A1Q96QR1 104 aa4.57□□□□□ -1.68
HMGB1P39-201ENST00000366304 AMELXQ99217 191 aa4.57□□□□□ -1.68
HMGB1P39-201ENST00000366304 NDUFC1O43677 76 aa4.56□□□□□ -1.68
HMGB1P39-201ENST00000366304 SPINK1P00995 79 aa4.56□□□□□ -1.68
HMGB1P39-201ENST00000366304 PRSS2P07478 247 aa4.56□□□□□ -1.68
HMGB1P39-201ENST00000366304 CD164Q04900 197 aa4.56□□□□□ -1.68
HMGB1P39-201ENST00000366304 A0A0U1RRA0 63 aa4.55□□□□□ -1.68
HMGB1P39-201ENST00000366304 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
HMGB1P39-201ENST00000366304 C11orf86A6NJI1 115 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 LST1O00453 97 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 Q1RN00 199 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 Q6JHZ5 121 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 FAM19A3Q7Z5A8 133 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 HIGD2AQ9BW72 106 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 CDKN2A-AS1Q9UH64 79 aa4.54□□□□□ -1.68
HMGB1P39-201ENST00000366304 FAM236DA0A1B0GTK5 79 aa4.53□□□□□ -1.68
HMGB1P39-201ENST00000366304 TMEM223A0PJW6 202 aa4.53□□□□□ -1.68
HMGB1P39-201ENST00000366304 FAM236CP0DP71 79 aa4.53□□□□□ -1.68
HMGB1P39-201ENST00000366304 VPREB1P12018 145 aa4.53□□□□□ -1.68
HMGB1P39-201ENST00000366304 ATP5EP2Q5VTU8 51 aa4.53□□□□□ -1.68
HMGB1P39-201ENST00000366304 A0A0J9YXY3 114 aa4.52□□□□□ -1.69
HMGB1P39-201ENST00000366304 TRBV10-3A0A0K0K1G6 114 aa4.52□□□□□ -1.69
HMGB1P39-201ENST00000366304 LGALS3P17931 250 aaKnown RBP4.52□□□□□ -1.69
HMGB1P39-201ENST00000366304 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms