RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 SPRR1BP22528 89 aa7.8□□□□□ -1.16
NLRC3-202ENST00000359128 ATRQ13535 2644 aa7.8□□□□□ -1.16
NLRC3-202ENST00000359128 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
NLRC3-202ENST00000359128 Q8NDZ9 215 aa7.77□□□□□ -1.17
NLRC3-202ENST00000359128 FLNAP21333 2647 aaKnown RBP7.77□□□□□ -1.17
NLRC3-202ENST00000359128 CFAP46Q8IYW2 2715 aa7.76□□□□□ -1.17
NLRC3-202ENST00000359128 LINC00472Q9H8W2 130 aa7.76□□□□□ -1.17
NLRC3-202ENST00000359128 M0QZ58 72 aa7.75□□□□□ -1.17
NLRC3-202ENST00000359128 Q75L30 129 aa7.74□□□□□ -1.17
NLRC3-202ENST00000359128 ITPR3Q14573 2671 aa7.74□□□□□ -1.17
NLRC3-202ENST00000359128 CENPEQ02224 2701 aa7.72□□□□□ -1.17
NLRC3-202ENST00000359128 CHD7Q9P2D1 2997 aa7.71□□□□□ -1.17
NLRC3-202ENST00000359128 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.18
NLRC3-202ENST00000359128 KRTAP26-1Q6PEX3 210 aa7.71□□□□□ -1.18
NLRC3-202ENST00000359128 ZNF292O60281 2723 aa7.67□□□□□ -1.18
NLRC3-202ENST00000359128 Q6ZR54 194 aa7.67□□□□□ -1.18
NLRC3-202ENST00000359128 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
NLRC3-202ENST00000359128 CHD9Q3L8U1 2897 aa7.66□□□□□ -1.18
NLRC3-202ENST00000359128 MKI67P46013 3256 aaKnown RBP7.64□□□□□ -1.19
NLRC3-202ENST00000359128 SETXQ7Z333 2677 aaKnown RBP7.64□□□□□ -1.19
NLRC3-202ENST00000359128 RANBP2P49792 3224 aaKnown RBP7.62□□□□□ -1.19
NLRC3-202ENST00000359128 PANO1I0J062 215 aa7.61□□□□□ -1.19
NLRC3-202ENST00000359128 RPL37P61927 97 aaKnown RBP7.61□□□□□ -1.19
NLRC3-202ENST00000359128 H1FX-AS1Q4G0G2 97 aa7.6□□□□□ -1.19
NLRC3-202ENST00000359128 TEP1Q99973 2627 aaKnown RBP7.6□□□□□ -1.19
NLRC3-202ENST00000359128 A0A087X002 238 aa7.58□□□□□ -1.2
NLRC3-202ENST00000359128 HTTP42858 3142 aa7.58□□□□□ -1.2
NLRC3-202ENST00000359128 BRCA2P51587 3418 aa7.57□□□□□ -1.2
NLRC3-202ENST00000359128 ROMO1P60602 79 aa7.57□□□□□ -1.2
NLRC3-202ENST00000359128 LAMA3Q16787 3333 aa7.57□□□□□ -1.2
NLRC3-202ENST00000359128 STAB1Q9NY15 2570 aa7.55□□□□□ -1.2
NLRC3-202ENST00000359128 BPTFQ12830 3046 aa7.53□□□□□ -1.2
NLRC3-202ENST00000359128 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
NLRC3-202ENST00000359128 A0A0A0MQY5 61 aa7.51□□□□□ -1.21
NLRC3-202ENST00000359128 TRANK1O15050 2925 aa7.5□□□□□ -1.21
NLRC3-202ENST00000359128 Q5VV11 94 aa7.49□□□□□ -1.21
NLRC3-202ENST00000359128 BAHCC1Q9P281 2608 aa7.49□□□□□ -1.21
NLRC3-202ENST00000359128 UNC79Q9P2D8 2635 aa7.48□□□□□ -1.21
NLRC3-202ENST00000359128 PRAC1Q96KF2 57 aa7.48□□□□□ -1.21
NLRC3-202ENST00000359128 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
NLRC3-202ENST00000359128 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
NLRC3-202ENST00000359128 SPATA8Q6RVD6 105 aa7.47□□□□□ -1.21
NLRC3-202ENST00000359128 COL6A5A8TX70 2615 aa7.47□□□□□ -1.21
NLRC3-202ENST00000359128 Q6ZRN7 208 aaPredicted RBP7.43□□□□□ -1.22
NLRC3-202ENST00000359128 IGSF10Q6WRI0 2623 aa7.41□□□□□ -1.22
NLRC3-202ENST00000359128 A8MUU9 505 aa7.41□□□□□ -1.22
NLRC3-202ENST00000359128 ASB16-AS1Q495Z4 193 aa7.41□□□□□ -1.22
NLRC3-202ENST00000359128 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
NLRC3-202ENST00000359128 PRUNE2Q8WUY3 3088 aa7.4□□□□□ -1.22
NLRC3-202ENST00000359128 TEX15Q9BXT5 2789 aa7.4□□□□□ -1.22
NLRC3-202ENST00000359128 MGAQ8IWI9 3026 aa7.39□□□□□ -1.23
NLRC3-202ENST00000359128 XIRP2A4UGR9 3374 aa7.39□□□□□ -1.23
NLRC3-202ENST00000359128 CDH23Q9H251 3354 aa7.38□□□□□ -1.23
NLRC3-202ENST00000359128 CHD6Q8TD26 2715 aa7.38□□□□□ -1.23
NLRC3-202ENST00000359128 DSPP15924 2871 aaKnown RBP7.37□□□□□ -1.23
NLRC3-202ENST00000359128 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
NLRC3-202ENST00000359128 Q5XG85 94 aa7.37□□□□□ -1.23
NLRC3-202ENST00000359128 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
NLRC3-202ENST00000359128 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
NLRC3-202ENST00000359128 A0A0C4DFX4 3053 aa7.35□□□□□ -1.23
NLRC3-202ENST00000359128 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.23
NLRC3-202ENST00000359128 UNC80Q8N2C7 3258 aa7.33□□□□□ -1.24
NLRC3-202ENST00000359128 KRTAP13-2Q52LG2 175 aa7.31□□□□□ -1.24
NLRC3-202ENST00000359128 AKAP13Q12802 2813 aa7.31□□□□□ -1.24
NLRC3-202ENST00000359128 NOTCH1P46531 2555 aa7.29□□□□□ -1.24
NLRC3-202ENST00000359128 CFAP54Q96N23 3096 aa7.29□□□□□ -1.24
NLRC3-202ENST00000359128 GCN1Q92616 2671 aaKnown RBP7.29□□□□□ -1.24
NLRC3-202ENST00000359128 LAMA2P24043 3122 aaKnown RBP7.24□□□□□ -1.25
NLRC3-202ENST00000359128 WDFY4Q6ZS81 3184 aa7.24□□□□□ -1.25
NLRC3-202ENST00000359128 CELSR3Q9NYQ7 3312 aa7.24□□□□□ -1.25
NLRC3-202ENST00000359128 KRTAP7-1Q8IUC3 87 aa7.21□□□□□ -1.25
NLRC3-202ENST00000359128 NBEAL1Q6ZS30 2694 aa7.2□□□□□ -1.26
NLRC3-202ENST00000359128 KRTAP13-1Q8IUC0 172 aa7.2□□□□□ -1.26
NLRC3-202ENST00000359128 SZT2Q5T011 3432 aa7.19□□□□□ -1.26
NLRC3-202ENST00000359128 UBR5O95071 2799 aaPredicted RBP7.19□□□□□ -1.26
NLRC3-202ENST00000359128 A8MU10 97 aa7.19□□□□□ -1.26
NLRC3-202ENST00000359128 TRIOO75962 3097 aa7.17□□□□□ -1.26
NLRC3-202ENST00000359128 TNP1P09430 55 aa7.17□□□□□ -1.26
NLRC3-202ENST00000359128 MAP1AP78559 2803 aaPredicted RBP7.17□□□□□ -1.26
NLRC3-202ENST00000359128 DNAH14Q0VDD8 3507 aa7.16□□□□□ -1.26
NLRC3-202ENST00000359128 FLNCQ14315 2725 aa7.13□□□□□ -1.27
NLRC3-202ENST00000359128 H3BS24 57 aa7.12□□□□□ -1.27
NLRC3-202ENST00000359128 A0A1B0GVY2 172 aa7.09□□□□□ -1.27
NLRC3-202ENST00000359128 NSD1Q96L73 2696 aaPredicted RBP7.07□□□□□ -1.28
NLRC3-202ENST00000359128 FREM2Q5SZK8 3169 aa7.07□□□□□ -1.28
NLRC3-202ENST00000359128 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
NLRC3-202ENST00000359128 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
NLRC3-202ENST00000359128 ITPR2Q14571 2701 aa7.04□□□□□ -1.28
NLRC3-202ENST00000359128 XP32Q5T750 250 aa7.03□□□□□ -1.28
NLRC3-202ENST00000359128 ITPR1Q14643 2758 aa7.02□□□□□ -1.28
NLRC3-202ENST00000359128 VCANP13611 3396 aa7.01□□□□□ -1.29
NLRC3-202ENST00000359128 VPS13AQ96RL7 3174 aa7□□□□□ -1.29
NLRC3-202ENST00000359128 FLG2Q5D862 2391 aaPredicted RBP6.99□□□□□ -1.29
NLRC3-202ENST00000359128 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
NLRC3-202ENST00000359128 SPTBN5Q9NRC6 3674 aaKnown RBP6.98□□□□□ -1.29
NLRC3-202ENST00000359128 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
NLRC3-202ENST00000359128 COL6A3P12111 3177 aa6.97□□□□□ -1.29
NLRC3-202ENST00000359128 HIVEP1P15822 2718 aa6.97□□□□□ -1.29
NLRC3-202ENST00000359128 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
NLRC3-202ENST00000359128 TPRXLQ17RH7 258 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms