RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 SPRR1AP35321 89 aa5.28□□□□□ -1.56
CTNND1-201ENST00000358694 SPRR1BP22528 89 aa5.27□□□□□ -1.57
CTNND1-201ENST00000358694 KRTAP10-2P60368 255 aa5.27□□□□□ -1.57
CTNND1-201ENST00000358694 KRTAP16-1A8MUX0 517 aa5.26□□□□□ -1.57
CTNND1-201ENST00000358694 Q6ZR54 194 aa5.26□□□□□ -1.57
CTNND1-201ENST00000358694 KRTAP26-1Q6PEX3 210 aa5.26□□□□□ -1.57
CTNND1-201ENST00000358694 PANO1I0J062 215 aa5.25□□□□□ -1.57
CTNND1-201ENST00000358694 WDR87Q6ZQQ6 2873 aa5.24□□□□□ -1.57
CTNND1-201ENST00000358694 PCSK5Q92824 1860 aa5.24□□□□□ -1.57
CTNND1-201ENST00000358694 Q5XG85 94 aa5.24□□□□□ -1.57
CTNND1-201ENST00000358694 KRTAP1-5Q9BYS1 174 aa5.21□□□□□ -1.58
CTNND1-201ENST00000358694 A8MUU9 505 aa5.21□□□□□ -1.58
CTNND1-201ENST00000358694 BPTFQ12830 3046 aa5.18□□□□□ -1.58
CTNND1-201ENST00000358694 EPG5Q9HCE0 2579 aa5.17□□□□□ -1.58
CTNND1-201ENST00000358694 HECTD1Q9ULT8 2610 aa5.16□□□□□ -1.58
CTNND1-201ENST00000358694 CYSTM1Q9H1C7 97 aa5.16□□□□□ -1.58
CTNND1-201ENST00000358694 FLNBO75369 2602 aaKnown RBP5.16□□□□□ -1.58
CTNND1-201ENST00000358694 ATRQ13535 2644 aa5.14□□□□□ -1.59
CTNND1-201ENST00000358694 CENPFP49454 3210 aa5.14□□□□□ -1.59
CTNND1-201ENST00000358694 TNP1P09430 55 aa5.13□□□□□ -1.59
CTNND1-201ENST00000358694 A0A087X002 238 aa5.13□□□□□ -1.59
CTNND1-201ENST00000358694 UTRNP46939 3433 aa5.13□□□□□ -1.59
CTNND1-201ENST00000358694 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
CTNND1-201ENST00000358694 A8MU10 97 aa5.12□□□□□ -1.59
CTNND1-201ENST00000358694 ASB16-AS1Q495Z4 193 aa5.12□□□□□ -1.59
CTNND1-201ENST00000358694 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
CTNND1-201ENST00000358694 MAST4O15021 2626 aa5.09□□□□□ -1.6
CTNND1-201ENST00000358694 STAB1Q9NY15 2570 aa5.08□□□□□ -1.6
CTNND1-201ENST00000358694 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
CTNND1-201ENST00000358694 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
CTNND1-201ENST00000358694 DMBT1Q9UGM3 2413 aaPredicted RBP5.04□□□□□ -1.6
CTNND1-201ENST00000358694 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
CTNND1-201ENST00000358694 KRTAP29-1A8MX34 341 aaPredicted RBP5.02□□□□□ -1.61
CTNND1-201ENST00000358694 KRTAP10-8P60410 259 aa5.02□□□□□ -1.61
CTNND1-201ENST00000358694 PCNTO95613 3336 aa5□□□□□ -1.61
CTNND1-201ENST00000358694 KRTAP4-16G5E9R7 235 aaPredicted RBP4.98□□□□□ -1.61
CTNND1-201ENST00000358694 ITPR3Q14573 2671 aa4.95□□□□□ -1.62
CTNND1-201ENST00000358694 STAB2Q8WWQ8 2551 aa4.95□□□□□ -1.62
CTNND1-201ENST00000358694 DNAH12Q6ZR08 3092 aa4.94□□□□□ -1.62
CTNND1-201ENST00000358694 A0A1B0GVY2 172 aa4.94□□□□□ -1.62
CTNND1-201ENST00000358694 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
CTNND1-201ENST00000358694 P0C880 135 aa4.93□□□□□ -1.62
CTNND1-201ENST00000358694 NBEAL1Q6ZS30 2694 aa4.92□□□□□ -1.62
CTNND1-201ENST00000358694 CEP350Q5VT06 3117 aa4.92□□□□□ -1.62
CTNND1-201ENST00000358694 A6NN06 94 aa4.92□□□□□ -1.62
CTNND1-201ENST00000358694 CFAP46Q8IYW2 2715 aa4.91□□□□□ -1.62
CTNND1-201ENST00000358694 KRTAP13-2Q52LG2 175 aa4.91□□□□□ -1.62
CTNND1-201ENST00000358694 A0A0C4DFX4 3053 aa4.9□□□□□ -1.63
CTNND1-201ENST00000358694 KRTAP11-1Q8IUC1 163 aa4.9□□□□□ -1.63
CTNND1-201ENST00000358694 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
CTNND1-201ENST00000358694 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
CTNND1-201ENST00000358694 HELZ2Q9BYK8 2649 aaKnown RBP4.87□□□□□ -1.63
CTNND1-201ENST00000358694 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
CTNND1-201ENST00000358694 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
CTNND1-201ENST00000358694 LAMA2P24043 3122 aaKnown RBP4.84□□□□□ -1.64
CTNND1-201ENST00000358694 C5orf42Q9H799 3197 aa4.83□□□□□ -1.64
CTNND1-201ENST00000358694 CHD7Q9P2D1 2997 aa4.8□□□□□ -1.64
CTNND1-201ENST00000358694 SETXQ7Z333 2677 aaKnown RBP4.79□□□□□ -1.64
CTNND1-201ENST00000358694 CHD9Q3L8U1 2897 aa4.77□□□□□ -1.65
CTNND1-201ENST00000358694 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
CTNND1-201ENST00000358694 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
CTNND1-201ENST00000358694 BRCA2P51587 3418 aa4.75□□□□□ -1.65
CTNND1-201ENST00000358694 XP32Q5T750 250 aa4.75□□□□□ -1.65
CTNND1-201ENST00000358694 TEP1Q99973 2627 aaKnown RBP4.73□□□□□ -1.65
CTNND1-201ENST00000358694 HTTP42858 3142 aa4.73□□□□□ -1.65
CTNND1-201ENST00000358694 TEX15Q9BXT5 2789 aa4.73□□□□□ -1.65
CTNND1-201ENST00000358694 AKAP13Q12802 2813 aa4.72□□□□□ -1.65
CTNND1-201ENST00000358694 LAMA3Q16787 3333 aa4.72□□□□□ -1.65
CTNND1-201ENST00000358694 MKI67P46013 3256 aaKnown RBP4.7□□□□□ -1.66
CTNND1-201ENST00000358694 PRRC2CQ9Y520 2896 aaKnown RBP4.7□□□□□ -1.66
CTNND1-201ENST00000358694 UNC79Q9P2D8 2635 aa4.69□□□□□ -1.66
CTNND1-201ENST00000358694 CENPEQ02224 2701 aa4.68□□□□□ -1.66
CTNND1-201ENST00000358694 CHD6Q8TD26 2715 aa4.68□□□□□ -1.66
CTNND1-201ENST00000358694 TRANK1O15050 2925 aa4.67□□□□□ -1.66
CTNND1-201ENST00000358694 NOTCH1P46531 2555 aa4.66□□□□□ -1.66
CTNND1-201ENST00000358694 KRTAP21-3Q3LHN1 58 aa4.65□□□□□ -1.67
CTNND1-201ENST00000358694 TPRXLQ17RH7 258 aa4.64□□□□□ -1.67
CTNND1-201ENST00000358694 COL6A5A8TX70 2615 aa4.62□□□□□ -1.67
CTNND1-201ENST00000358694 XIRP2A4UGR9 3374 aa4.62□□□□□ -1.67
CTNND1-201ENST00000358694 RANBP2P49792 3224 aaKnown RBP4.62□□□□□ -1.67
CTNND1-201ENST00000358694 BAHCC1Q9P281 2608 aa4.62□□□□□ -1.67
CTNND1-201ENST00000358694 H0YAA0 97 aa4.6□□□□□ -1.67
CTNND1-201ENST00000358694 ZNF292O60281 2723 aa4.58□□□□□ -1.68
CTNND1-201ENST00000358694 CFAP54Q96N23 3096 aa4.58□□□□□ -1.68
CTNND1-201ENST00000358694 KRTAP1-4P0C5Y4 121 aa4.56□□□□□ -1.68
CTNND1-201ENST00000358694 GCN1Q92616 2671 aaKnown RBP4.55□□□□□ -1.68
CTNND1-201ENST00000358694 IGSF10Q6WRI0 2623 aa4.55□□□□□ -1.68
CTNND1-201ENST00000358694 UNC80Q8N2C7 3258 aa4.54□□□□□ -1.68
CTNND1-201ENST00000358694 PRUNE2Q8WUY3 3088 aa4.52□□□□□ -1.69
CTNND1-201ENST00000358694 KMT2BQ9UMN6 2715 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-201ENST00000358694 CDH23Q9H251 3354 aa4.51□□□□□ -1.69
CTNND1-201ENST00000358694 CELSR3Q9NYQ7 3312 aa4.51□□□□□ -1.69
CTNND1-201ENST00000358694 MGAQ8IWI9 3026 aa4.5□□□□□ -1.69
CTNND1-201ENST00000358694 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
CTNND1-201ENST00000358694 TRIOO75962 3097 aa4.5□□□□□ -1.69
CTNND1-201ENST00000358694 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
CTNND1-201ENST00000358694 NSD1Q96L73 2696 aaPredicted RBP4.47□□□□□ -1.69
CTNND1-201ENST00000358694 DNAH14Q0VDD8 3507 aa4.47□□□□□ -1.69
CTNND1-201ENST00000358694 FREM2Q5SZK8 3169 aa4.46□□□□□ -1.7
CTNND1-201ENST00000358694 NBEAL2Q6ZNJ1 2754 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms