RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 KRTAP16-1A8MUX0 517 aa6.68□□□□□ -1.34
COL11A1-202ENST00000358392 SPRR1AP35321 89 aa6.68□□□□□ -1.34
COL11A1-202ENST00000358392 Q5VSD8 79 aa6.68□□□□□ -1.34
COL11A1-202ENST00000358392 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
COL11A1-202ENST00000358392 FLG2Q5D862 2391 aaPredicted RBP6.66□□□□□ -1.34
COL11A1-202ENST00000358392 CEP295Q9C0D2 2601 aa6.66□□□□□ -1.34
COL11A1-202ENST00000358392 C20orf166-AS1Q96NR2 134 aa6.65□□□□□ -1.34
COL11A1-202ENST00000358392 C5orf42Q9H799 3197 aa6.65□□□□□ -1.34
COL11A1-202ENST00000358392 Q6ZR54 194 aa6.63□□□□□ -1.35
COL11A1-202ENST00000358392 FASNP49327 2511 aaKnown RBP6.63□□□□□ -1.35
COL11A1-202ENST00000358392 PRRC2CQ9Y520 2896 aaKnown RBP6.61□□□□□ -1.35
COL11A1-202ENST00000358392 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
COL11A1-202ENST00000358392 A8MU10 97 aa6.6□□□□□ -1.35
COL11A1-202ENST00000358392 KRTAP10-1P60331 282 aa6.59□□□□□ -1.35
COL11A1-202ENST00000358392 KRTAP10-2P60368 255 aa6.59□□□□□ -1.35
COL11A1-202ENST00000358392 CEP350Q5VT06 3117 aa6.58□□□□□ -1.36
COL11A1-202ENST00000358392 SPRR1BP22528 89 aa6.58□□□□□ -1.36
COL11A1-202ENST00000358392 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
COL11A1-202ENST00000358392 NDUFAF8A1L188 74 aa6.54□□□□□ -1.36
COL11A1-202ENST00000358392 A0A087X002 238 aa6.53□□□□□ -1.36
COL11A1-202ENST00000358392 NOTCH2NLQ7Z3S9 236 aa6.53□□□□□ -1.36
COL11A1-202ENST00000358392 PANO1I0J062 215 aa6.52□□□□□ -1.37
COL11A1-202ENST00000358392 MGAM2Q2M2H8 2515 aa6.5□□□□□ -1.37
COL11A1-202ENST00000358392 A8MUU9 505 aa6.47□□□□□ -1.37
COL11A1-202ENST00000358392 ASB16-AS1Q495Z4 193 aa6.46□□□□□ -1.38
COL11A1-202ENST00000358392 A6NN06 94 aa6.46□□□□□ -1.38
COL11A1-202ENST00000358392 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
COL11A1-202ENST00000358392 PCNTO95613 3336 aa6.45□□□□□ -1.38
COL11A1-202ENST00000358392 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
COL11A1-202ENST00000358392 CFAP54Q96N23 3096 aa6.44□□□□□ -1.38
COL11A1-202ENST00000358392 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
COL11A1-202ENST00000358392 LCE6AA0A183 80 aa6.37□□□□□ -1.39
COL11A1-202ENST00000358392 FLNAP21333 2647 aaKnown RBP6.36□□□□□ -1.39
COL11A1-202ENST00000358392 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
COL11A1-202ENST00000358392 EPG5Q9HCE0 2579 aa6.36□□□□□ -1.39
COL11A1-202ENST00000358392 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
COL11A1-202ENST00000358392 HECTD1Q9ULT8 2610 aa6.35□□□□□ -1.39
COL11A1-202ENST00000358392 ITPR3Q14573 2671 aa6.33□□□□□ -1.4
COL11A1-202ENST00000358392 A0A0C4DFX4 3053 aa6.33□□□□□ -1.4
COL11A1-202ENST00000358392 AKAP13Q12802 2813 aa6.31□□□□□ -1.4
COL11A1-202ENST00000358392 ATRQ13535 2644 aa6.29□□□□□ -1.4
COL11A1-202ENST00000358392 TNP1P09430 55 aa6.28□□□□□ -1.4
COL11A1-202ENST00000358392 FREM2Q5SZK8 3169 aa6.28□□□□□ -1.4
COL11A1-202ENST00000358392 XIRP2A4UGR9 3374 aa6.27□□□□□ -1.41
COL11A1-202ENST00000358392 MKI67P46013 3256 aaKnown RBP6.27□□□□□ -1.41
COL11A1-202ENST00000358392 CFAP46Q8IYW2 2715 aa6.27□□□□□ -1.41
COL11A1-202ENST00000358392 NBEAL1Q6ZS30 2694 aa6.26□□□□□ -1.41
COL11A1-202ENST00000358392 CHD6Q8TD26 2715 aa6.24□□□□□ -1.41
COL11A1-202ENST00000358392 LAMA2P24043 3122 aaKnown RBP6.23□□□□□ -1.41
COL11A1-202ENST00000358392 CELSR3Q9NYQ7 3312 aa6.21□□□□□ -1.42
COL11A1-202ENST00000358392 MAST4O15021 2626 aa6.2□□□□□ -1.42
COL11A1-202ENST00000358392 TRIOO75962 3097 aa6.2□□□□□ -1.42
COL11A1-202ENST00000358392 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
COL11A1-202ENST00000358392 KRTAP7-1Q8IUC3 87 aa6.18□□□□□ -1.42
COL11A1-202ENST00000358392 FLNBO75369 2602 aaKnown RBP6.16□□□□□ -1.42
COL11A1-202ENST00000358392 CENPEQ02224 2701 aa6.16□□□□□ -1.42
COL11A1-202ENST00000358392 A0A1B0GVY2 172 aa6.16□□□□□ -1.42
COL11A1-202ENST00000358392 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
COL11A1-202ENST00000358392 USP34Q70CQ2 3546 aa6.14□□□□□ -1.43
COL11A1-202ENST00000358392 RPS29P62273 56 aaKnown RBP6.13□□□□□ -1.43
COL11A1-202ENST00000358392 TEX15Q9BXT5 2789 aa6.12□□□□□ -1.43
COL11A1-202ENST00000358392 RANBP2P49792 3224 aaKnown RBP6.12□□□□□ -1.43
COL11A1-202ENST00000358392 REV3LO60673 3130 aa6.12□□□□□ -1.43
COL11A1-202ENST00000358392 CHD7Q9P2D1 2997 aa6.11□□□□□ -1.43
COL11A1-202ENST00000358392 STAB1Q9NY15 2570 aa6.1□□□□□ -1.43
COL11A1-202ENST00000358392 Q6ZRN7 208 aaPredicted RBP6.09□□□□□ -1.43
COL11A1-202ENST00000358392 GCN1Q92616 2671 aaKnown RBP6.08□□□□□ -1.44
COL11A1-202ENST00000358392 DNAH14Q0VDD8 3507 aa6.08□□□□□ -1.44
COL11A1-202ENST00000358392 HELZ2Q9BYK8 2649 aaKnown RBP6.07□□□□□ -1.44
COL11A1-202ENST00000358392 MGAQ8IWI9 3026 aa6.07□□□□□ -1.44
COL11A1-202ENST00000358392 UNC80Q8N2C7 3258 aa6.07□□□□□ -1.44
COL11A1-202ENST00000358392 STAB2Q8WWQ8 2551 aa6.07□□□□□ -1.44
COL11A1-202ENST00000358392 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
COL11A1-202ENST00000358392 NBEAL2Q6ZNJ1 2754 aa6.03□□□□□ -1.44
COL11A1-202ENST00000358392 UNC79Q9P2D8 2635 aa6.03□□□□□ -1.44
COL11A1-202ENST00000358392 VPS13AQ96RL7 3174 aa6.03□□□□□ -1.44
COL11A1-202ENST00000358392 COL6A5A8TX70 2615 aa6.01□□□□□ -1.45
COL11A1-202ENST00000358392 H0YAA0 97 aa6□□□□□ -1.45
COL11A1-202ENST00000358392 BRCA2P51587 3418 aa6□□□□□ -1.45
COL11A1-202ENST00000358392 LAMA3Q16787 3333 aa5.98□□□□□ -1.45
COL11A1-202ENST00000358392 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
COL11A1-202ENST00000358392 FRYQ5TBA9 3013 aa5.98□□□□□ -1.45
COL11A1-202ENST00000358392 P0C880 135 aa5.97□□□□□ -1.45
COL11A1-202ENST00000358392 WDFY4Q6ZS81 3184 aa5.97□□□□□ -1.45
COL11A1-202ENST00000358392 NOTCH1P46531 2555 aa5.95□□□□□ -1.46
COL11A1-202ENST00000358392 KALRNO60229 2985 aa5.93□□□□□ -1.46
COL11A1-202ENST00000358392 PRUNE2Q8WUY3 3088 aa5.93□□□□□ -1.46
COL11A1-202ENST00000358392 COL6A3P12111 3177 aa5.91□□□□□ -1.46
COL11A1-202ENST00000358392 CDH23Q9H251 3354 aa5.91□□□□□ -1.46
COL11A1-202ENST00000358392 XP32Q5T750 250 aa5.9□□□□□ -1.47
COL11A1-202ENST00000358392 SZT2Q5T011 3432 aa5.9□□□□□ -1.47
COL11A1-202ENST00000358392 APCP25054 2843 aa5.89□□□□□ -1.47
COL11A1-202ENST00000358392 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
COL11A1-202ENST00000358392 TEP1Q99973 2627 aaKnown RBP5.88□□□□□ -1.47
COL11A1-202ENST00000358392 CFAP47Q6ZTR5 3102 aa5.86□□□□□ -1.47
COL11A1-202ENST00000358392 CRYBG3Q68DQ2 2970 aa5.83□□□□□ -1.48
COL11A1-202ENST00000358392 HTTP42858 3142 aa5.81□□□□□ -1.48
COL11A1-202ENST00000358392 DSPP15924 2871 aaKnown RBP5.8□□□□□ -1.48
COL11A1-202ENST00000358392 MAP1AP78559 2803 aaPredicted RBP5.79□□□□□ -1.48
COL11A1-202ENST00000358392 ITPR2Q14571 2701 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms