RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TEP1Q99973 2627 aaKnown RBP7.84□□□□□ -1.16
COLCA1-201ENST00000355430 IGLV5-37A0A075B6J1 123 aa7.83□□□□□ -1.16
COLCA1-201ENST00000355430 SPINK1P00995 79 aa7.83□□□□□ -1.16
COLCA1-201ENST00000355430 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
COLCA1-201ENST00000355430 WDFY3Q8IZQ1 3526 aa7.82□□□□□ -1.16
COLCA1-201ENST00000355430 DSCR10P59022 87 aa7.82□□□□□ -1.16
COLCA1-201ENST00000355430 C8orf87E5RJ46 101 aa7.81□□□□□ -1.16
COLCA1-201ENST00000355430 OXTP01178 125 aa7.81□□□□□ -1.16
COLCA1-201ENST00000355430 ACYP2P14621 99 aa7.81□□□□□ -1.16
COLCA1-201ENST00000355430 UNC79Q9P2D8 2635 aa7.8□□□□□ -1.16
COLCA1-201ENST00000355430 CHD6Q8TD26 2715 aa7.8□□□□□ -1.16
COLCA1-201ENST00000355430 ATMQ13315 3056 aa7.8□□□□□ -1.16
COLCA1-201ENST00000355430 MRPL34Q9BQ48 92 aaKnown RBP7.8□□□□□ -1.16
COLCA1-201ENST00000355430 DMXL2Q8TDJ6 3036 aa7.79□□□□□ -1.16
COLCA1-201ENST00000355430 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
COLCA1-201ENST00000355430 IGSF10Q6WRI0 2623 aa7.79□□□□□ -1.16
COLCA1-201ENST00000355430 FAM229BQ4G0N7 80 aa7.78□□□□□ -1.16
COLCA1-201ENST00000355430 SPRR4Q96PI1 79 aa7.78□□□□□ -1.16
COLCA1-201ENST00000355430 A0A1B0GU69 56 aa7.78□□□□□ -1.16
COLCA1-201ENST00000355430 C7orf65Q6ZTY9 151 aa7.76□□□□□ -1.17
COLCA1-201ENST00000355430 FP248Q71RG6 208 aaPredicted RBP7.76□□□□□ -1.17
COLCA1-201ENST00000355430 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
COLCA1-201ENST00000355430 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
COLCA1-201ENST00000355430 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
COLCA1-201ENST00000355430 ANAPC11Q9NYG5 84 aa7.74□□□□□ -1.17
COLCA1-201ENST00000355430 KRTAP26-1Q6PEX3 210 aa7.72□□□□□ -1.17
COLCA1-201ENST00000355430 GCN1Q92616 2671 aaKnown RBP7.72□□□□□ -1.17
COLCA1-201ENST00000355430 DMXL1Q9Y485 3027 aa7.72□□□□□ -1.17
COLCA1-201ENST00000355430 COL6A5A8TX70 2615 aa7.71□□□□□ -1.18
COLCA1-201ENST00000355430 SPANXA2-OT1Q8N9U9 137 aa7.71□□□□□ -1.18
COLCA1-201ENST00000355430 TEX15Q9BXT5 2789 aa7.7□□□□□ -1.18
COLCA1-201ENST00000355430 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
COLCA1-201ENST00000355430 SPRR1AP35321 89 aa7.7□□□□□ -1.18
COLCA1-201ENST00000355430 STAB1Q9NY15 2570 aa7.7□□□□□ -1.18
COLCA1-201ENST00000355430 CFAP47Q6ZTR5 3102 aa7.7□□□□□ -1.18
COLCA1-201ENST00000355430 Q1T7F1 81 aa7.7□□□□□ -1.18
COLCA1-201ENST00000355430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.66□□□□□ -1.18
COLCA1-201ENST00000355430 HRNRQ86YZ3 2850 aaPredicted RBP7.66□□□□□ -1.18
COLCA1-201ENST00000355430 NBEAL2Q6ZNJ1 2754 aa7.65□□□□□ -1.18
COLCA1-201ENST00000355430 RBM12B-AS1Q9P1G2 102 aa7.65□□□□□ -1.18
COLCA1-201ENST00000355430 ZFHX4Q86UP3 3567 aa7.65□□□□□ -1.19
COLCA1-201ENST00000355430 IGLV8-61A0A075B6I0 122 aa7.64□□□□□ -1.19
COLCA1-201ENST00000355430 PLAC8Q9NZF1 115 aa7.64□□□□□ -1.19
COLCA1-201ENST00000355430 Q5VSD8 79 aa7.64□□□□□ -1.19
COLCA1-201ENST00000355430 COL12A1Q99715 3063 aa7.63□□□□□ -1.19
COLCA1-201ENST00000355430 IGLV7-46A0A075B6I9 117 aa7.63□□□□□ -1.19
COLCA1-201ENST00000355430 DMDP11532 3685 aa7.63□□□□□ -1.19
COLCA1-201ENST00000355430 PRR26Q8N8Z3 221 aa7.61□□□□□ -1.19
COLCA1-201ENST00000355430 ITPR1Q14643 2758 aa7.59□□□□□ -1.19
COLCA1-201ENST00000355430 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
COLCA1-201ENST00000355430 ASPMQ8IZT6 3477 aa7.58□□□□□ -1.2
COLCA1-201ENST00000355430 CD164Q04900 197 aa7.57□□□□□ -1.2
COLCA1-201ENST00000355430 Q6ZSA8 131 aa7.57□□□□□ -1.2
COLCA1-201ENST00000355430 FLNCQ14315 2725 aa7.57□□□□□ -1.2
COLCA1-201ENST00000355430 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
COLCA1-201ENST00000355430 DCHS1Q96JQ0 3298 aa7.55□□□□□ -1.2
COLCA1-201ENST00000355430 KRTAP4-16G5E9R7 235 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-201ENST00000355430 CDC42SE1Q9NRR8 79 aa7.54□□□□□ -1.2
COLCA1-201ENST00000355430 KRTAP1-5Q9BYS1 174 aa7.54□□□□□ -1.2
COLCA1-201ENST00000355430 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
COLCA1-201ENST00000355430 Q8N9P0 234 aaPredicted RBP7.53□□□□□ -1.2
COLCA1-201ENST00000355430 UQCR11O14957 56 aa7.53□□□□□ -1.2
COLCA1-201ENST00000355430 UTP20O75691 2785 aaKnown RBP7.52□□□□□ -1.21
COLCA1-201ENST00000355430 KRTAP10-1P60331 282 aa7.51□□□□□ -1.21
COLCA1-201ENST00000355430 MIR22HGQ0VDD5 57 aa7.51□□□□□ -1.21
COLCA1-201ENST00000355430 SPRR1BP22528 89 aa7.51□□□□□ -1.21
COLCA1-201ENST00000355430 KRTAP10-2P60368 255 aa7.5□□□□□ -1.21
COLCA1-201ENST00000355430 Q5VV11 94 aa7.5□□□□□ -1.21
COLCA1-201ENST00000355430 Q6ZR54 194 aa7.5□□□□□ -1.21
COLCA1-201ENST00000355430 Q75L30 129 aa7.5□□□□□ -1.21
COLCA1-201ENST00000355430 SMG1Q96Q15 3661 aaKnown RBP7.49□□□□□ -1.21
COLCA1-201ENST00000355430 LAMA5O15230 3695 aa7.48□□□□□ -1.21
COLCA1-201ENST00000355430 M0R2T5 61 aa7.47□□□□□ -1.21
COLCA1-201ENST00000355430 RELNP78509 3460 aa7.47□□□□□ -1.21
COLCA1-201ENST00000355430 CSMD1Q96PZ7 3565 aa7.47□□□□□ -1.21
COLCA1-201ENST00000355430 ZANQ9Y493 2812 aa7.44□□□□□ -1.22
COLCA1-201ENST00000355430 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
COLCA1-201ENST00000355430 HRES1P13985 223 aa7.44□□□□□ -1.22
COLCA1-201ENST00000355430 LINC01558Q9Y6Z2 57 aa7.44□□□□□ -1.22
COLCA1-201ENST00000355430 SEC61BP60468 96 aaKnown RBP7.43□□□□□ -1.22
COLCA1-201ENST00000355430 NOTCH1P46531 2555 aa7.42□□□□□ -1.22
COLCA1-201ENST00000355430 KRTAP7-1Q8IUC3 87 aa7.42□□□□□ -1.22
COLCA1-201ENST00000355430 KRTAP29-1A8MX34 341 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-201ENST00000355430 ITPR2Q14571 2701 aa7.41□□□□□ -1.22
COLCA1-201ENST00000355430 LCA10Q71F78 164 aa7.41□□□□□ -1.22
COLCA1-201ENST00000355430 Q8N1X5 172 aa7.41□□□□□ -1.22
COLCA1-201ENST00000355430 ASH1LQ9NR48 2969 aaKnown RBP7.41□□□□□ -1.22
COLCA1-201ENST00000355430 MUC3AQ02505 3323 aa7.38□□□□□ -1.23
COLCA1-201ENST00000355430 PANO1I0J062 215 aa7.38□□□□□ -1.23
COLCA1-201ENST00000355430 DCHS2Q6V1P9 2916 aa7.37□□□□□ -1.23
COLCA1-201ENST00000355430 UBR5O95071 2799 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-201ENST00000355430 KRTAP11-1Q8IUC1 163 aa7.37□□□□□ -1.23
COLCA1-201ENST00000355430 SPINK7P58062 85 aa7.36□□□□□ -1.23
COLCA1-201ENST00000355430 Q5W150 140 aa7.33□□□□□ -1.24
COLCA1-201ENST00000355430 NBEAL1Q6ZS30 2694 aa7.32□□□□□ -1.24
COLCA1-201ENST00000355430 LINC00483Q53H64 154 aa7.32□□□□□ -1.24
COLCA1-201ENST00000355430 KMT2BQ9UMN6 2715 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-201ENST00000355430 APCP25054 2843 aa7.31□□□□□ -1.24
COLCA1-201ENST00000355430 HIVEP1P15822 2718 aa7.31□□□□□ -1.24
COLCA1-201ENST00000355430 FBN2P35556 2912 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms