RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 BATFQ16520 125 aa13.6□□□□□ -0.23
MADCAM1-202ENST00000346144 SPAG11AQ6PDA7 123 aa13.6□□□□□ -0.23
MADCAM1-202ENST00000346144 PPDPFLQ8WWR9 84 aa13.59□□□□□ -0.23
MADCAM1-202ENST00000346144 OCIAD2Q56VL3 154 aa13.58□□□□□ -0.24
MADCAM1-202ENST00000346144 UBR4Q5T4S7 5183 aa13.58□□□□□ -0.24
MADCAM1-202ENST00000346144 C4orf48Q5BLP8 95 aa13.56□□□□□ -0.24
MADCAM1-202ENST00000346144 SCGB1C2P0DMR2 95 aa13.54□□□□□ -0.24
MADCAM1-202ENST00000346144 F8WEM9 126 aa13.51□□□□□ -0.25
MADCAM1-202ENST00000346144 DNAL4O96015 105 aa13.51□□□□□ -0.25
MADCAM1-202ENST00000346144 SPINK1P00995 79 aa13.51□□□□□ -0.25
MADCAM1-202ENST00000346144 GHRHP01286 108 aa13.51□□□□□ -0.25
MADCAM1-202ENST00000346144 NAA38Q9BRA0 125 aaKnown RBP13.49□□□□□ -0.25
MADCAM1-202ENST00000346144 SNHG12Q9BXW3 62 aa13.49□□□□□ -0.25
MADCAM1-202ENST00000346144 LST1O00453 97 aa13.48□□□□□ -0.25
MADCAM1-202ENST00000346144 TRACP01848 142 aa13.47□□□□□ -0.25
MADCAM1-202ENST00000346144 IGLV8-61A0A075B6I0 122 aa13.45□□□□□ -0.26
MADCAM1-202ENST00000346144 RPS29P62273 56 aaKnown RBP13.45□□□□□ -0.26
MADCAM1-202ENST00000346144 ORMDL1Q9P0S3 153 aa13.45□□□□□ -0.26
MADCAM1-202ENST00000346144 H3BQ85 93 aa13.43□□□□□ -0.26
MADCAM1-202ENST00000346144 TAX1BP3O14907 124 aa13.41□□□□□ -0.26
MADCAM1-202ENST00000346144 FABP2P12104 132 aa13.41□□□□□ -0.26
MADCAM1-202ENST00000346144 NDUFV3P56181 108 aaKnown RBP13.41□□□□□ -0.26
MADCAM1-202ENST00000346144 CD164Q04900 197 aa13.41□□□□□ -0.26
MADCAM1-202ENST00000346144 LYRM7Q5U5X0 104 aa13.41□□□□□ -0.26
MADCAM1-202ENST00000346144 H3BUT2 72 aa13.4□□□□□ -0.26
MADCAM1-202ENST00000346144 Q6JHZ5 121 aa13.4□□□□□ -0.26
MADCAM1-202ENST00000346144 C9orf118A6NHY6 69 aa13.39□□□□□ -0.27
MADCAM1-202ENST00000346144 HRCT1Q6UXD1 115 aa13.39□□□□□ -0.27
MADCAM1-202ENST00000346144 A0A0G2JQZ4 141 aa13.39□□□□□ -0.27
MADCAM1-202ENST00000346144 TCL1BO95988 128 aa13.39□□□□□ -0.27
MADCAM1-202ENST00000346144 ATXN8Q156A1 80 aa13.39□□□□□ -0.27
MADCAM1-202ENST00000346144 LRP2P98164 4655 aa13.38□□□□□ -0.27
MADCAM1-202ENST00000346144 PCP4L1A6NKN8 68 aa13.38□□□□□ -0.27
MADCAM1-202ENST00000346144 TMEM256-PLSCR3K7ERE1 68 aa13.38□□□□□ -0.27
MADCAM1-202ENST00000346144 PRR4Q16378 134 aa13.37□□□□□ -0.27
MADCAM1-202ENST00000346144 RETNLBQ9BQ08 111 aa13.37□□□□□ -0.27
MADCAM1-202ENST00000346144 IGFL1Q6UW32 110 aa13.36□□□□□ -0.27
MADCAM1-202ENST00000346144 TRBV20-1A0A075B6N2 111 aa13.34□□□□□ -0.27
MADCAM1-202ENST00000346144 LIMD2Q9BT23 127 aa13.34□□□□□ -0.27
MADCAM1-202ENST00000346144 H3BMG7 143 aa13.33□□□□□ -0.28
MADCAM1-202ENST00000346144 COL5A1-AS1Q5SY13 56 aa13.33□□□□□ -0.28
MADCAM1-202ENST00000346144 A0A1W2PPM0 123 aa13.32□□□□□ -0.28
MADCAM1-202ENST00000346144 UBE2V1Q13404 147 aa13.32□□□□□ -0.28
MADCAM1-202ENST00000346144 BAALC-AS2P0C853 105 aa13.29□□□□□ -0.28
MADCAM1-202ENST00000346144 Q5XG85 94 aa13.27□□□□□ -0.29
MADCAM1-202ENST00000346144 FP248Q71RG6 208 aaPredicted RBP13.26□□□□□ -0.29
MADCAM1-202ENST00000346144 TRBV7-7A0A0K0K1E9 115 aa13.23□□□□□ -0.29
MADCAM1-202ENST00000346144 ANKRD29Q8N6D5 301 aa13.23□□□□□ -0.29
MADCAM1-202ENST00000346144 IGLV7-46A0A075B6I9 117 aa13.22□□□□□ -0.29
MADCAM1-202ENST00000346144 Q6Q795 121 aa13.22□□□□□ -0.29
MADCAM1-202ENST00000346144 A0A1B0GV72 72 aa13.21□□□□□ -0.29
MADCAM1-202ENST00000346144 C9JAW5 83 aa13.2□□□□□ -0.3
MADCAM1-202ENST00000346144 TEN1Q86WV5 123 aa13.19□□□□□ -0.3
MADCAM1-202ENST00000346144 SPCS1Q9Y6A9 102 aa13.17□□□□□ -0.3
MADCAM1-202ENST00000346144 RBM3P98179 157 aaKnown RBP13.15□□□□□ -0.3
MADCAM1-202ENST00000346144 RNF213Q63HN8 5207 aa13.15□□□□□ -0.3
MADCAM1-202ENST00000346144 TPRXLQ17RH7 258 aa13.14□□□□□ -0.31
MADCAM1-202ENST00000346144 TRBV7-4A0A0J9YYF1 115 aa13.13□□□□□ -0.31
MADCAM1-202ENST00000346144 A0A1W2PNM2 257 aa13.13□□□□□ -0.31
MADCAM1-202ENST00000346144 ASB16-AS1Q495Z4 193 aa13.13□□□□□ -0.31
MADCAM1-202ENST00000346144 C1orf195Q5TG92 126 aa13.13□□□□□ -0.31
MADCAM1-202ENST00000346144 LPAP08519 4548 aa13.12□□□□□ -0.31
MADCAM1-202ENST00000346144 DSCR8Q96T75 97 aa13.12□□□□□ -0.31
MADCAM1-202ENST00000346144 JMJD7-PLA2G4BH0Y9G9 81 aa13.11□□□□□ -0.31
MADCAM1-202ENST00000346144 H3BT86 120 aa13.11□□□□□ -0.31
MADCAM1-202ENST00000346144 CCKP06307 115 aa13.09□□□□□ -0.31
MADCAM1-202ENST00000346144 SS18L2Q9UHA2 77 aa13.09□□□□□ -0.31
MADCAM1-202ENST00000346144 A0A087WSZ3 146 aa13.08□□□□□ -0.32
MADCAM1-202ENST00000346144 MTURNQ8N3F0 131 aa13.08□□□□□ -0.32
MADCAM1-202ENST00000346144 K7EP34 96 aa13.06□□□□□ -0.32
MADCAM1-202ENST00000346144 KRTAP13-3Q3SY46 172 aa13.06□□□□□ -0.32
MADCAM1-202ENST00000346144 OBSCN-AS1Q96MR7 158 aa13.04□□□□□ -0.32
MADCAM1-202ENST00000346144 CDIP1Q9H305 208 aa13.02□□□□□ -0.33
MADCAM1-202ENST00000346144 LOC110117498A0A087WWA1 95 aa13.01□□□□□ -0.33
MADCAM1-202ENST00000346144 VPS25Q9BRG1 176 aa13.01□□□□□ -0.33
MADCAM1-202ENST00000346144 Q6ZQT0 140 aa12.99□□□□□ -0.33
MADCAM1-202ENST00000346144 PDE6GP18545 87 aa12.98□□□□□ -0.33
MADCAM1-202ENST00000346144 GTF2H5Q6ZYL4 71 aa12.98□□□□□ -0.33
MADCAM1-202ENST00000346144 C14orf132Q9NPU4 83 aa12.98□□□□□ -0.33
MADCAM1-202ENST00000346144 SMCPP49901 116 aaPredicted RBP12.96□□□□□ -0.33
MADCAM1-202ENST00000346144 PRO0461Q9UI25 63 aa12.95□□□□□ -0.34
MADCAM1-202ENST00000346144 C21orf62-AS1Q17RA5 79 aa12.93□□□□□ -0.34
MADCAM1-202ENST00000346144 Q96NJ1 140 aa12.93□□□□□ -0.34
MADCAM1-202ENST00000346144 A0A1B0GW54 56 aa12.9□□□□□ -0.34
MADCAM1-202ENST00000346144 C9orf92A6NGG3 77 aa12.88□□□□□ -0.35
MADCAM1-202ENST00000346144 LINC00472Q9H8W2 130 aa12.86□□□□□ -0.35
MADCAM1-202ENST00000346144 XP32Q5T750 250 aa12.85□□□□□ -0.35
MADCAM1-202ENST00000346144 F8W1H4 67 aa12.84□□□□□ -0.35
MADCAM1-202ENST00000346144 IGKV4-1P06312 121 aa12.81□□□□□ -0.36
MADCAM1-202ENST00000346144 SIGMAR1Q99720 223 aa12.8□□□□□ -0.36
MADCAM1-202ENST00000346144 DEFB116Q30KQ4 102 aa12.78□□□□□ -0.36
MADCAM1-202ENST00000346144 J3KT08 172 aa12.72□□□□□ -0.37
MADCAM1-202ENST00000346144 SEC61BP60468 96 aaKnown RBP12.71□□□□□ -0.37
MADCAM1-202ENST00000346144 NREPQ16612 68 aa12.69□□□□□ -0.38
MADCAM1-202ENST00000346144 ETDBQ3ZM63 59 aa12.69□□□□□ -0.38
MADCAM1-202ENST00000346144 A0A1B0GV90 55 aa12.67□□□□□ -0.38
MADCAM1-202ENST00000346144 MUC2Q02817 5179 aa12.67□□□□□ -0.38
MADCAM1-202ENST00000346144 MUC17Q685J3 4493 aa12.67□□□□□ -0.38
MADCAM1-202ENST00000346144 DSCR10P59022 87 aa12.64□□□□□ -0.39
MADCAM1-202ENST00000346144 RPL37P61927 97 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms