RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 MT1HL1P0DM35 61 aa7.05□□□□□ -1.28
SNCA-202ENST00000345009 FXYD2P54710 66 aa7.05□□□□□ -1.28
SNCA-202ENST00000345009 GAGE2AQ6NT46 116 aa7.05□□□□□ -1.28
SNCA-202ENST00000345009 M0R143 59 aa7.04□□□□□ -1.28
SNCA-202ENST00000345009 ERC2-IT1O76042 136 aa7.04□□□□□ -1.28
SNCA-202ENST00000345009 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
SNCA-202ENST00000345009 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
SNCA-202ENST00000345009 A0A087X002 238 aa7.02□□□□□ -1.29
SNCA-202ENST00000345009 H0YGX0 51 aa7.02□□□□□ -1.29
SNCA-202ENST00000345009 LINC00483Q53H64 154 aa7.02□□□□□ -1.29
SNCA-202ENST00000345009 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
SNCA-202ENST00000345009 hADV29S1A0JD25 119 aa7□□□□□ -1.29
SNCA-202ENST00000345009 COX6CP09669 75 aa7□□□□□ -1.29
SNCA-202ENST00000345009 LINC00575Q6W349 94 aa7□□□□□ -1.29
SNCA-202ENST00000345009 TEX49A0A1B0GTD5 131 aa6.99□□□□□ -1.29
SNCA-202ENST00000345009 PSMB2P49721 201 aa6.99□□□□□ -1.29
SNCA-202ENST00000345009 ST20-AS1Q8NBB2 130 aa6.99□□□□□ -1.29
SNCA-202ENST00000345009 DEFB105AQ8NG35 78 aa6.99□□□□□ -1.29
SNCA-202ENST00000345009 LAMTOR3Q9UHA4 124 aa6.99□□□□□ -1.29
SNCA-202ENST00000345009 SPRR1BP22528 89 aa6.97□□□□□ -1.29
SNCA-202ENST00000345009 HERC1Q15751 4861 aa6.97□□□□□ -1.29
SNCA-202ENST00000345009 IGLV9-49A0A0B4J1Y8 123 aa6.96□□□□□ -1.3
SNCA-202ENST00000345009 K7ERJ3 54 aa6.96□□□□□ -1.3
SNCA-202ENST00000345009 KRTAP13-2Q52LG2 175 aa6.96□□□□□ -1.3
SNCA-202ENST00000345009 SSBP3-AS1Q7Z2R9 100 aa6.96□□□□□ -1.3
SNCA-202ENST00000345009 IGLV5-48A0A075B6I7 105 aa6.95□□□□□ -1.3
SNCA-202ENST00000345009 A0A1B0GX51 115 aa6.95□□□□□ -1.3
SNCA-202ENST00000345009 OCIAD2Q56VL3 154 aa6.95□□□□□ -1.3
SNCA-202ENST00000345009 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
SNCA-202ENST00000345009 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.95□□□□□ -1.3
SNCA-202ENST00000345009 LINC00304Q8N9R0 145 aa6.95□□□□□ -1.3
SNCA-202ENST00000345009 TRIAP1O43715 76 aa6.94□□□□□ -1.3
SNCA-202ENST00000345009 SCGB1C2P0DMR2 95 aa6.94□□□□□ -1.3
SNCA-202ENST00000345009 C9orf153Q5TBE3 101 aa6.94□□□□□ -1.3
SNCA-202ENST00000345009 Q6ZQY7 126 aa6.94□□□□□ -1.3
SNCA-202ENST00000345009 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
SNCA-202ENST00000345009 TNXBP22105 4242 aa6.94□□□□□ -1.3
SNCA-202ENST00000345009 MOBPQ13875 183 aa6.93□□□□□ -1.3
SNCA-202ENST00000345009 PPDPFLQ8WWR9 84 aa6.93□□□□□ -1.3
SNCA-202ENST00000345009 F8WEM9 126 aa6.92□□□□□ -1.3
SNCA-202ENST00000345009 TSPAN13O95857 204 aa6.92□□□□□ -1.3
SNCA-202ENST00000345009 DNAL4O96015 105 aa6.92□□□□□ -1.3
SNCA-202ENST00000345009 Q8NBF4 154 aa6.92□□□□□ -1.3
SNCA-202ENST00000345009 Q8N377 158 aa6.91□□□□□ -1.3
SNCA-202ENST00000345009 SNHG12Q9BXW3 62 aa6.91□□□□□ -1.3
SNCA-202ENST00000345009 H3BQ85 93 aa6.9□□□□□ -1.3
SNCA-202ENST00000345009 LINC01547P58512 204 aaPredicted RBP6.9□□□□□ -1.3
SNCA-202ENST00000345009 BATFQ16520 125 aa6.9□□□□□ -1.3
SNCA-202ENST00000345009 SPINK1P00995 79 aa6.89□□□□□ -1.31
SNCA-202ENST00000345009 A0A1B0GV90 55 aa6.88□□□□□ -1.31
SNCA-202ENST00000345009 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
SNCA-202ENST00000345009 LYRM7Q5U5X0 104 aa6.87□□□□□ -1.31
SNCA-202ENST00000345009 CLEC2BQ92478 149 aa6.87□□□□□ -1.31
SNCA-202ENST00000345009 SMIM29Q86T20 159 aa6.86□□□□□ -1.31
SNCA-202ENST00000345009 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
SNCA-202ENST00000345009 FABP2P12104 132 aa6.85□□□□□ -1.31
SNCA-202ENST00000345009 Q6JHZ5 121 aa6.85□□□□□ -1.31
SNCA-202ENST00000345009 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
SNCA-202ENST00000345009 A0A1B0GV72 72 aa6.84□□□□□ -1.31
SNCA-202ENST00000345009 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
SNCA-202ENST00000345009 TMEM256-PLSCR3K7ERE1 68 aa6.84□□□□□ -1.31
SNCA-202ENST00000345009 TRACP01848 142 aa6.84□□□□□ -1.31
SNCA-202ENST00000345009 RPS29P62273 56 aaKnown RBP6.84□□□□□ -1.31
SNCA-202ENST00000345009 CD164Q04900 197 aa6.83□□□□□ -1.32
SNCA-202ENST00000345009 LST1O00453 97 aa6.82□□□□□ -1.32
SNCA-202ENST00000345009 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
SNCA-202ENST00000345009 ATXN8Q156A1 80 aa6.82□□□□□ -1.32
SNCA-202ENST00000345009 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
SNCA-202ENST00000345009 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
SNCA-202ENST00000345009 PRR4Q16378 134 aa6.81□□□□□ -1.32
SNCA-202ENST00000345009 LIMD2Q9BT23 127 aa6.81□□□□□ -1.32
SNCA-202ENST00000345009 H3BUT2 72 aa6.8□□□□□ -1.32
SNCA-202ENST00000345009 NAA38Q9BRA0 125 aaKnown RBP6.8□□□□□ -1.32
SNCA-202ENST00000345009 H3BMG7 143 aa6.79□□□□□ -1.32
SNCA-202ENST00000345009 COL5A1-AS1Q5SY13 56 aa6.79□□□□□ -1.32
SNCA-202ENST00000345009 HRCT1Q6UXD1 115 aa6.79□□□□□ -1.32
SNCA-202ENST00000345009 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
SNCA-202ENST00000345009 TAX1BP3O14907 124 aa6.77□□□□□ -1.33
SNCA-202ENST00000345009 TCL1BO95988 128 aa6.77□□□□□ -1.33
SNCA-202ENST00000345009 BAALC-AS2P0C853 105 aa6.77□□□□□ -1.33
SNCA-202ENST00000345009 UBE2V1Q13404 147 aa6.77□□□□□ -1.33
SNCA-202ENST00000345009 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
SNCA-202ENST00000345009 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
SNCA-202ENST00000345009 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
SNCA-202ENST00000345009 RETNLBQ9BQ08 111 aa6.75□□□□□ -1.33
SNCA-202ENST00000345009 HMCN2Q8NDA2 5059 aa6.75□□□□□ -1.33
SNCA-202ENST00000345009 IGLV7-46A0A075B6I9 117 aa6.74□□□□□ -1.33
SNCA-202ENST00000345009 Q5XG85 94 aa6.74□□□□□ -1.33
SNCA-202ENST00000345009 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
SNCA-202ENST00000345009 A0A0G2JQZ4 141 aa6.73□□□□□ -1.33
SNCA-202ENST00000345009 VPS25Q9BRG1 176 aa6.73□□□□□ -1.33
SNCA-202ENST00000345009 RBM3P98179 157 aaKnown RBP6.72□□□□□ -1.33
SNCA-202ENST00000345009 TEN1Q86WV5 123 aa6.72□□□□□ -1.33
SNCA-202ENST00000345009 TRBV7-7A0A0K0K1E9 115 aa6.71□□□□□ -1.34
SNCA-202ENST00000345009 Q6Q795 121 aa6.71□□□□□ -1.34
SNCA-202ENST00000345009 DSCR8Q96T75 97 aa6.71□□□□□ -1.34
SNCA-202ENST00000345009 C9JAW5 83 aa6.7□□□□□ -1.34
SNCA-202ENST00000345009 JMJD7-PLA2G4BH0Y9G9 81 aa6.7□□□□□ -1.34
SNCA-202ENST00000345009 SS18L2Q9UHA2 77 aa6.7□□□□□ -1.34
SNCA-202ENST00000345009 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms