RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 BRK1Q8WUW1 75 aa10.52□□□□□ -0.72
SMARCA4-201ENST00000344626 COX6B2Q6YFQ2 88 aa10.52□□□□□ -0.73
SMARCA4-201ENST00000344626 NF1P21359 2839 aa10.51□□□□□ -0.73
SMARCA4-201ENST00000344626 CCDC179H3BU77 68 aa10.51□□□□□ -0.73
SMARCA4-201ENST00000344626 A8MWP4 228 aa10.51□□□□□ -0.73
SMARCA4-201ENST00000344626 IGFL1Q6UW32 110 aa10.51□□□□□ -0.73
SMARCA4-201ENST00000344626 SVIPQ8NHG7 77 aa10.5□□□□□ -0.73
SMARCA4-201ENST00000344626 PRO0461Q9UI25 63 aa10.5□□□□□ -0.73
SMARCA4-201ENST00000344626 C7orf65Q6ZTY9 151 aa10.5□□□□□ -0.73
SMARCA4-201ENST00000344626 SPRR4Q96PI1 79 aa10.49□□□□□ -0.73
SMARCA4-201ENST00000344626 EIF4EBP3O60516 100 aaPredicted RBP10.49□□□□□ -0.73
SMARCA4-201ENST00000344626 DCHS1Q96JQ0 3298 aa10.48□□□□□ -0.73
SMARCA4-201ENST00000344626 H3BPC8 53 aa10.48□□□□□ -0.73
SMARCA4-201ENST00000344626 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.48□□□□□ -0.73
SMARCA4-201ENST00000344626 Q8N377 158 aa10.47□□□□□ -0.73
SMARCA4-201ENST00000344626 MYO15AQ9UKN7 3530 aa10.46□□□□□ -0.73
SMARCA4-201ENST00000344626 A6NED7 52 aa10.44□□□□□ -0.74
SMARCA4-201ENST00000344626 MRPL34Q9BQ48 92 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-201ENST00000344626 TRAV22A0A0B4J277 110 aa10.43□□□□□ -0.74
SMARCA4-201ENST00000344626 KRTAP1-5Q9BYS1 174 aa10.42□□□□□ -0.74
SMARCA4-201ENST00000344626 C9orf92A6NGG3 77 aa10.41□□□□□ -0.74
SMARCA4-201ENST00000344626 ACYP2P14621 99 aa10.4□□□□□ -0.74
SMARCA4-201ENST00000344626 SMIM26A0A096LP01 95 aa10.4□□□□□ -0.75
SMARCA4-201ENST00000344626 LOC101927531A0A1B0GV80 90 aa10.38□□□□□ -0.75
SMARCA4-201ENST00000344626 ERC2-IT1O76042 136 aa10.37□□□□□ -0.75
SMARCA4-201ENST00000344626 PRR26Q8N8Z3 221 aa10.36□□□□□ -0.75
SMARCA4-201ENST00000344626 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
SMARCA4-201ENST00000344626 FLG2Q5D862 2391 aaPredicted RBP10.36□□□□□ -0.75
SMARCA4-201ENST00000344626 PLAC8Q9NZF1 115 aa10.36□□□□□ -0.75
SMARCA4-201ENST00000344626 A0A1B0GVX0 72 aa10.35□□□□□ -0.75
SMARCA4-201ENST00000344626 DSCR10P59022 87 aa10.35□□□□□ -0.75
SMARCA4-201ENST00000344626 K7EQZ3 153 aa10.35□□□□□ -0.75
SMARCA4-201ENST00000344626 C8orf17Q9NRJ1 99 aa10.35□□□□□ -0.75
SMARCA4-201ENST00000344626 Q5VSD8 79 aa10.34□□□□□ -0.75
SMARCA4-201ENST00000344626 MUC3AQ02505 3323 aa10.34□□□□□ -0.75
SMARCA4-201ENST00000344626 OBSCN-AS1Q96MR7 158 aa10.34□□□□□ -0.75
SMARCA4-201ENST00000344626 PRR15Q8IV56 129 aa10.34□□□□□ -0.75
SMARCA4-201ENST00000344626 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
SMARCA4-201ENST00000344626 KRTAP10-2P60368 255 aa10.33□□□□□ -0.76
SMARCA4-201ENST00000344626 TENM3Q9P273 2699 aa10.33□□□□□ -0.76
SMARCA4-201ENST00000344626 FBN2P35556 2912 aa10.32□□□□□ -0.76
SMARCA4-201ENST00000344626 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
SMARCA4-201ENST00000344626 CD164Q04900 197 aa10.3□□□□□ -0.76
SMARCA4-201ENST00000344626 PKD1L1Q8TDX9 2849 aa10.29□□□□□ -0.76
SMARCA4-201ENST00000344626 KRTAP10-1P60331 282 aa10.29□□□□□ -0.76
SMARCA4-201ENST00000344626 FAM229BQ4G0N7 80 aa10.29□□□□□ -0.76
SMARCA4-201ENST00000344626 A0A0U1RQV1 116 aa10.28□□□□□ -0.76
SMARCA4-201ENST00000344626 HRNRQ86YZ3 2850 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-201ENST00000344626 IGLV7-46A0A075B6I9 117 aa10.23□□□□□ -0.77
SMARCA4-201ENST00000344626 TENM1Q9UKZ4 2725 aa10.23□□□□□ -0.77
SMARCA4-201ENST00000344626 IGLV5-48A0A075B6I7 105 aa10.23□□□□□ -0.77
SMARCA4-201ENST00000344626 A0A1W2PNM2 257 aa10.21□□□□□ -0.78
SMARCA4-201ENST00000344626 Q6ZR54 194 aa10.21□□□□□ -0.78
SMARCA4-201ENST00000344626 A0A1B0GU69 56 aa10.2□□□□□ -0.78
SMARCA4-201ENST00000344626 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
SMARCA4-201ENST00000344626 RELNP78509 3460 aa10.19□□□□□ -0.78
SMARCA4-201ENST00000344626 TENM2Q9NT68 2774 aa10.18□□□□□ -0.78
SMARCA4-201ENST00000344626 KRTAP26-1Q6PEX3 210 aa10.15□□□□□ -0.79
SMARCA4-201ENST00000344626 SPRR1AP35321 89 aa10.13□□□□□ -0.79
SMARCA4-201ENST00000344626 PSPHP1O15172 72 aa10.12□□□□□ -0.79
SMARCA4-201ENST00000344626 Q6ZSA8 131 aa10.09□□□□□ -0.79
SMARCA4-201ENST00000344626 M0R2T5 61 aa10.05□□□□□ -0.8
SMARCA4-201ENST00000344626 LAMA5O15230 3695 aa10.05□□□□□ -0.8
SMARCA4-201ENST00000344626 SPRR1BP22528 89 aa10.03□□□□□ -0.8
SMARCA4-201ENST00000344626 C1orf195Q5TG92 126 aa10□□□□□ -0.81
SMARCA4-201ENST00000344626 Q8NDZ9 215 aa10□□□□□ -0.81
SMARCA4-201ENST00000344626 PANO1I0J062 215 aa9.99□□□□□ -0.81
SMARCA4-201ENST00000344626 ZFHX3Q15911 3703 aa9.98□□□□□ -0.81
SMARCA4-201ENST00000344626 PMAIP1Q13794 54 aa9.97□□□□□ -0.81
SMARCA4-201ENST00000344626 ASPMQ8IZT6 3477 aa9.96□□□□□ -0.81
SMARCA4-201ENST00000344626 COA5Q86WW8 74 aa9.96□□□□□ -0.82
SMARCA4-201ENST00000344626 LINC01600Q96MT4 127 aa9.96□□□□□ -0.82
SMARCA4-201ENST00000344626 OTOGQ6ZRI0 2925 aa9.95□□□□□ -0.82
SMARCA4-201ENST00000344626 FBN1P35555 2871 aaKnown RBP9.94□□□□□ -0.82
SMARCA4-201ENST00000344626 VWFP04275 2813 aa9.94□□□□□ -0.82
SMARCA4-201ENST00000344626 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
SMARCA4-201ENST00000344626 CELSR1Q9NYQ6 3014 aa9.91□□□□□ -0.82
SMARCA4-201ENST00000344626 PDZD2O15018 2839 aa9.9□□□□□ -0.82
SMARCA4-201ENST00000344626 KLKP1Q107X0 134 aa9.9□□□□□ -0.83
SMARCA4-201ENST00000344626 TGP01266 2768 aa9.9□□□□□ -0.83
SMARCA4-201ENST00000344626 RPS28P62857 69 aaKnown RBP9.89□□□□□ -0.83
SMARCA4-201ENST00000344626 Q6ZRN7 208 aaPredicted RBP9.89□□□□□ -0.83
SMARCA4-201ENST00000344626 SEC61BP60468 96 aaKnown RBP9.87□□□□□ -0.83
SMARCA4-201ENST00000344626 LINC00483Q53H64 154 aa9.85□□□□□ -0.83
SMARCA4-201ENST00000344626 Q8N1X5 172 aa9.83□□□□□ -0.84
SMARCA4-201ENST00000344626 OXTP01178 125 aa9.83□□□□□ -0.84
SMARCA4-201ENST00000344626 ZCCHC13Q8WW36 166 aaKnown RBP9.82□□□□□ -0.84
SMARCA4-201ENST00000344626 SPANXA2-OT1Q8N9U9 137 aa9.81□□□□□ -0.84
SMARCA4-201ENST00000344626 FP248Q71RG6 208 aaPredicted RBP9.8□□□□□ -0.84
SMARCA4-201ENST00000344626 WDFY3Q8IZQ1 3526 aa9.79□□□□□ -0.84
SMARCA4-201ENST00000344626 DMDP11532 3685 aa9.79□□□□□ -0.84
SMARCA4-201ENST00000344626 UQCR11O14957 56 aa9.79□□□□□ -0.84
SMARCA4-201ENST00000344626 A8MUN3 132 aa9.78□□□□□ -0.84
SMARCA4-201ENST00000344626 SRRM2Q9UQ35 2752 aaKnown RBP9.78□□□□□ -0.84
SMARCA4-201ENST00000344626 NBPF19A0A087WUL8 3843 aa9.77□□□□□ -0.85
SMARCA4-201ENST00000344626 MMP24-AS1A0A0U1RRL7 71 aa9.77□□□□□ -0.85
SMARCA4-201ENST00000344626 LINC00472Q9H8W2 130 aa9.76□□□□□ -0.85
SMARCA4-201ENST00000344626 KRTAP4-16G5E9R7 235 aaPredicted RBP9.74□□□□□ -0.85
SMARCA4-201ENST00000344626 CYP4F30PQ9H0H9 118 aa9.74□□□□□ -0.85
SMARCA4-201ENST00000344626 SMG1Q96Q15 3661 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms