RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 SPRR1BP22528 89 aa11.83□□□□□ -0.52
SH2B3-201ENST00000341259 COX6B2Q6YFQ2 88 aa11.82□□□□□ -0.52
SH2B3-201ENST00000341259 MMP24-AS1A0A0U1RRL7 71 aa11.81□□□□□ -0.52
SH2B3-201ENST00000341259 Q1T7F1 81 aa11.79□□□□□ -0.52
SH2B3-201ENST00000341259 SPINT4Q6UDR6 99 aa11.78□□□□□ -0.52
SH2B3-201ENST00000341259 LAMA1P25391 3075 aa11.78□□□□□ -0.52
SH2B3-201ENST00000341259 CHD6Q8TD26 2715 aa11.78□□□□□ -0.52
SH2B3-201ENST00000341259 VCANP13611 3396 aa11.78□□□□□ -0.52
SH2B3-201ENST00000341259 LCA10Q71F78 164 aa11.77□□□□□ -0.52
SH2B3-201ENST00000341259 CDC42SE1Q9NRR8 79 aa11.76□□□□□ -0.53
SH2B3-201ENST00000341259 FRYQ5TBA9 3013 aa11.76□□□□□ -0.53
SH2B3-201ENST00000341259 CELSR3Q9NYQ7 3312 aa11.75□□□□□ -0.53
SH2B3-201ENST00000341259 IGLV7-46A0A075B6I9 117 aa11.74□□□□□ -0.53
SH2B3-201ENST00000341259 LINC00472Q9H8W2 130 aa11.73□□□□□ -0.53
SH2B3-201ENST00000341259 RBM12B-AS1Q9P1G2 102 aa11.73□□□□□ -0.53
SH2B3-201ENST00000341259 UNC79Q9P2D8 2635 aa11.73□□□□□ -0.53
SH2B3-201ENST00000341259 TEX15Q9BXT5 2789 aa11.7□□□□□ -0.54
SH2B3-201ENST00000341259 HRES1P13985 223 aa11.7□□□□□ -0.54
SH2B3-201ENST00000341259 CYSTM1Q9H1C7 97 aa11.69□□□□□ -0.54
SH2B3-201ENST00000341259 GCN1Q92616 2671 aaKnown RBP11.67□□□□□ -0.54
SH2B3-201ENST00000341259 TEP1Q99973 2627 aaKnown RBP11.67□□□□□ -0.54
SH2B3-201ENST00000341259 Q5XG85 94 aa11.66□□□□□ -0.54
SH2B3-201ENST00000341259 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
SH2B3-201ENST00000341259 SPTBN5Q9NRC6 3674 aaKnown RBP11.62□□□□□ -0.55
SH2B3-201ENST00000341259 KRTAP10-2P60368 255 aa11.62□□□□□ -0.55
SH2B3-201ENST00000341259 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
SH2B3-201ENST00000341259 MAP1AP78559 2803 aaPredicted RBP11.61□□□□□ -0.55
SH2B3-201ENST00000341259 Q8N9P0 234 aaPredicted RBP11.61□□□□□ -0.55
SH2B3-201ENST00000341259 ZCCHC13Q8WW36 166 aaKnown RBP11.6□□□□□ -0.55
SH2B3-201ENST00000341259 SETXQ7Z333 2677 aaKnown RBP11.6□□□□□ -0.55
SH2B3-201ENST00000341259 PANO1I0J062 215 aa11.6□□□□□ -0.55
SH2B3-201ENST00000341259 LINC00483Q53H64 154 aa11.58□□□□□ -0.56
SH2B3-201ENST00000341259 CRIPTQ9P021 101 aa11.58□□□□□ -0.56
SH2B3-201ENST00000341259 Q6ZSA8 131 aa11.56□□□□□ -0.56
SH2B3-201ENST00000341259 Q75L30 129 aa11.55□□□□□ -0.56
SH2B3-201ENST00000341259 COL6A5A8TX70 2615 aa11.55□□□□□ -0.56
SH2B3-201ENST00000341259 A0A0D9SG42 100 aa11.55□□□□□ -0.56
SH2B3-201ENST00000341259 Q5W150 140 aa11.55□□□□□ -0.56
SH2B3-201ENST00000341259 FP248Q71RG6 208 aaPredicted RBP11.54□□□□□ -0.56
SH2B3-201ENST00000341259 Q6ZR54 194 aa11.53□□□□□ -0.56
SH2B3-201ENST00000341259 COL6A3P12111 3177 aa11.51□□□□□ -0.57
SH2B3-201ENST00000341259 LCE6AA0A183 80 aa11.51□□□□□ -0.57
SH2B3-201ENST00000341259 ATMQ13315 3056 aa11.5□□□□□ -0.57
SH2B3-201ENST00000341259 NBEAL2Q6ZNJ1 2754 aa11.5□□□□□ -0.57
SH2B3-201ENST00000341259 LINC01554Q52M75 96 aa11.48□□□□□ -0.57
SH2B3-201ENST00000341259 TNRC18O15417 2968 aaPredicted RBP11.47□□□□□ -0.57
SH2B3-201ENST00000341259 STAB1Q9NY15 2570 aa11.46□□□□□ -0.58
SH2B3-201ENST00000341259 LINC01558Q9Y6Z2 57 aa11.46□□□□□ -0.58
SH2B3-201ENST00000341259 BOD1L1Q8NFC6 3051 aa11.45□□□□□ -0.58
SH2B3-201ENST00000341259 NOTCH1P46531 2555 aa11.45□□□□□ -0.58
SH2B3-201ENST00000341259 KALRNO60229 2985 aa11.43□□□□□ -0.58
SH2B3-201ENST00000341259 A0A1B0GU33 70 aa11.41□□□□□ -0.58
SH2B3-201ENST00000341259 Q5VSD8 79 aa11.41□□□□□ -0.58
SH2B3-201ENST00000341259 LRBAP50851 2863 aa11.4□□□□□ -0.58
SH2B3-201ENST00000341259 ADGRG4Q8IZF6 3080 aa11.4□□□□□ -0.58
SH2B3-201ENST00000341259 FLNCQ14315 2725 aa11.4□□□□□ -0.58
SH2B3-201ENST00000341259 UBR5O95071 2799 aaPredicted RBP11.4□□□□□ -0.58
SH2B3-201ENST00000341259 DMXL2Q8TDJ6 3036 aa11.38□□□□□ -0.59
SH2B3-201ENST00000341259 KRTAP11-1Q8IUC1 163 aa11.38□□□□□ -0.59
SH2B3-201ENST00000341259 FRYLO94915 3013 aa11.38□□□□□ -0.59
SH2B3-201ENST00000341259 Q6ZRN7 208 aaPredicted RBP11.37□□□□□ -0.59
SH2B3-201ENST00000341259 NBEAQ8NFP9 2946 aa11.37□□□□□ -0.59
SH2B3-201ENST00000341259 SPINK7P58062 85 aa11.36□□□□□ -0.59
SH2B3-201ENST00000341259 KRTAP7-1Q8IUC3 87 aa11.36□□□□□ -0.59
SH2B3-201ENST00000341259 ITPR1Q14643 2758 aa11.36□□□□□ -0.59
SH2B3-201ENST00000341259 COL12A1Q99715 3063 aa11.36□□□□□ -0.59
SH2B3-201ENST00000341259 OXTP01178 125 aa11.35□□□□□ -0.59
SH2B3-201ENST00000341259 Q5VV11 94 aa11.34□□□□□ -0.59
SH2B3-201ENST00000341259 KRTAP29-1A8MX34 341 aaPredicted RBP11.34□□□□□ -0.59
SH2B3-201ENST00000341259 BAHCC1Q9P281 2608 aa11.33□□□□□ -0.6
SH2B3-201ENST00000341259 ITPR2Q14571 2701 aa11.31□□□□□ -0.6
SH2B3-201ENST00000341259 A0A087X002 238 aa11.31□□□□□ -0.6
SH2B3-201ENST00000341259 S4R3F8 94 aa11.31□□□□□ -0.6
SH2B3-201ENST00000341259 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
SH2B3-201ENST00000341259 UTP20O75691 2785 aaKnown RBP11.27□□□□□ -0.6
SH2B3-201ENST00000341259 FREM2Q5SZK8 3169 aa11.27□□□□□ -0.61
SH2B3-201ENST00000341259 REV3LO60673 3130 aa11.27□□□□□ -0.61
SH2B3-201ENST00000341259 EYSQ5T1H1 3165 aa11.25□□□□□ -0.61
SH2B3-201ENST00000341259 CSAG1Q6PB30 78 aa11.24□□□□□ -0.61
SH2B3-201ENST00000341259 TACC2O95359 2948 aa11.23□□□□□ -0.61
SH2B3-201ENST00000341259 DMAC1Q96GE9 116 aa11.22□□□□□ -0.61
SH2B3-201ENST00000341259 SPEGQ15772 3267 aa11.2□□□□□ -0.62
SH2B3-201ENST00000341259 USP34Q70CQ2 3546 aa11.19□□□□□ -0.62
SH2B3-201ENST00000341259 NOTCH2NLQ7Z3S9 236 aa11.19□□□□□ -0.62
SH2B3-201ENST00000341259 PRAC1Q96KF2 57 aa11.15□□□□□ -0.62
SH2B3-201ENST00000341259 KRTAP13-1Q8IUC0 172 aa11.15□□□□□ -0.62
SH2B3-201ENST00000341259 NSD1Q96L73 2696 aaPredicted RBP11.14□□□□□ -0.63
SH2B3-201ENST00000341259 ASB16-AS1Q495Z4 193 aa11.13□□□□□ -0.63
SH2B3-201ENST00000341259 SEC61BP60468 96 aaKnown RBP11.12□□□□□ -0.63
SH2B3-201ENST00000341259 DMXL1Q9Y485 3027 aa11.12□□□□□ -0.63
SH2B3-201ENST00000341259 M0R2T5 61 aa11.1□□□□□ -0.63
SH2B3-201ENST00000341259 CAMK2N1Q7Z7J9 78 aa11.1□□□□□ -0.63
SH2B3-201ENST00000341259 APCP25054 2843 aa11.09□□□□□ -0.63
SH2B3-201ENST00000341259 HIVEP1P15822 2718 aa11.09□□□□□ -0.63
SH2B3-201ENST00000341259 KMT2BQ9UMN6 2715 aaPredicted RBP11.09□□□□□ -0.63
SH2B3-201ENST00000341259 KRTAP13-2Q52LG2 175 aa11.04□□□□□ -0.64
SH2B3-201ENST00000341259 ZZEF1O43149 2961 aa11.04□□□□□ -0.64
SH2B3-201ENST00000341259 RPS29P62273 56 aaKnown RBP11.03□□□□□ -0.64
SH2B3-201ENST00000341259 HRNRQ86YZ3 2850 aaPredicted RBP11.03□□□□□ -0.64
SH2B3-201ENST00000341259 LUZP6Q538Z0 58 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms